Abstract
The DNA of Rhynchosciara hollaenderi was examined using isopycnic centrifugation in neutral CsCl. Two low density minor bands (collectively termed satellite DNA) were detected in addition to the main band DNA. Main band DNA has a buoyant density of 1.695 g/cm3. The larger of the two minor bands has a buoyant density of 1.680 g/cm3 while the smaller of the two minor bands has a buoyant density of about 1.675 g/cm3. Thermal denaturation studies have confirmed the presence of the two minor classes of DNA.—The satellite and main band DNAs were isolated in relatively pure form and were transcribed in vitro using DNA-dependent RNA polymerase from Escherichia coli. Annealing of the two complementary RNAs (cRNAs) with main band and satellite DNA was examined using filter hybridization techniques.—The chromosomal distribution of the satellite DNA was determined by in situ molecular hybridization of satellite-cRNA with Rhynchosciara salivary gland chromosomes. Satellite-cRNA hybridized with the centromeric heterochromatin of each of the four chromosomes (A, B, C, and X) and with certain densely staining bands in the telomere regions of the A and C chromosomes. Main band-cRNA annealed with many loci scattered throughout the chromosomes including areas containing satellite DNA.
Similar content being viewed by others
References
Birnstiel, M. L., Wallace, H., Sirlin, J. L., Fischberg, M.: Localization of the ribosomal DNA complements in the nucleolar organizer region of Xenopus laevis. Nat. Cancer Inst. Monogr. 23, 431–447 (1966).
Bond, H. E., Flamm, W. G., Burr, H. E., Bond, S. B.: Mouse satellite DNA. Further studies on its biological and physical characteristics and its intracellular localization. J. molec. Biol. 27, 289–302 (1967).
Bradshaw, W. S., Papaconstantinou, J.: Differential synthesis of salivary gland DNA during development of Rhynchosciara angelae. Fed.Proc. 29, 670 abs. (1970 a).
—: Differential incorporation of 5-bromodeoxyuridine into DNA puffs of larval salivary gland chromosomes in Rhynchosciara. Biochem. biophys. Res. Commun. 41, 306–312 (1970 b).
Breuer, M. E., Pavan, C.: Behavior of polytene chromosomes of Rhynchosciara angelae at different stages of larval development. Chromosoma (Berl.) 7, 371- 386 (1955).
Britten, R. J., Kohne, D. E.: Repeated sequences in DNA. Science 161, 529–540 (1968).
Burgess, R. R.: A new method for the large scale purification of Escherichia coli deoxyribonucleic acid-dependent ribonucleic acid polymerase. J. biol. Chem. 244, 6160–6167 (1969).
Chin, E. T., Bradshaw, W. S., Papaconstantinou, J.: Specific synthesis of a unique DNA during development of Rhynchosciara sp. Biophys. J. 10, 164 a (1970).
Chun, E. H. L., Littlefield, J. W.: The replication of the minor DNA component of mouse fibroblasts. J. molec. Biol. 7, 245–248 (1963).
Corneo, G., Ginelli, E., Soave, C., Bernardi, G.: Isolation and characterization of mouse and guinea pig satellite deoxyribonucleic acids. Biochemistry 7, 4373–4379 (1968).
Crouse, H. V., Keyl, H.-G.: Extra replications in the “DNA-puffs” of Sciara coprophila. Chromosoma (Berl.) 25, 357–364 (1968).
Flamm, W. G., McCallum, M., Walker, P. M. B.: The isolation of complementary strands from a mouse DNA fraction. Proc. nat. Acad. Sci. (Wash.) 57, 1729–1734 (1967).
—, Walker, P. M. B., McCallum, M.: Some properties of the single strands isolated from the DNA of the nuclear satellite of the mouse (Mus musculus). J. molec. Biol. 40, 423–443 (1969).
Gall, J. G., Pardue, M. L.: Nucleic acid hybridization in cytological preparations. In: Methods in enzymology XII C (L. Grossman and K. Moldave, eds). NewYork: Academic Press Inc. (in press) 1971.
Gillespie, D., Spiegelman, S.: A quantitative assay for DNA-RNA hybrids with DNA immobilized on a membrane. J. molec. Biol. 12, 829–842 (1965).
Hennig, W., Hennig, I., Stein, H.: Repeated sequences in the DNA of Drosophila and their localization in giant chromosomes. Chromosoma (Berl.) 32, 31–63 (1970).
Hinton, R.: The structure of the bands of salivary-gland chromosomes. J. Hered. 37, 99–102 (1946).
Jones, K. W.: Chromosomal and nuclear location of mouse satellite DNA in individual cells. Nature (Lond.) 255, 912–915 (1970).
—, Robertson, F. W.: Localization of reiterated nucleotide sequences in Drosophila and mouse by in situ hybridization of complementary RNA. Chromosoma (Berl.) 31, 331–345 (1970).
Kaufmann, B. P., Iddles, M. K.: Ectopic pairing in salivary gland chromosomes of Drosophila melanogaster. I. Distributional patterns in relation to puffing. Port. Acta biol. 7, 225–248 (1963).
Kit, S.: Equilibrium sedimentation in density gradients of DNA preparations from animal tissues. J. molec. Biol. 3, 711–716 (1961).
Maio, J. J., Schildkraut, C. L.: Isolated mammalian metaphase chromosomes. I. General characteristics of nucleic acids and proteins. J. molec. Biol. 24, 29–39 (1967).
—: Isolated mammalian metaphase chromosomes. II. Fractionated chromosomes of mouse and chinese hamster cells. J. molec. Biol. 40, 203–216 (1969).
Mandel, M., Marmur, J.: Use of ultraviolet absorbance-temperature profile for determining the guanine plus cytosine content of DNA. In: Methods in enzymology XII B (L. Grossman and K. Moldave, eds). New York: Academic Press Inc. 1968.
Marmur, J., Doty, P.: Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J. molec. Biol. 5, 109–118 (1962).
Mattingly, E., Parker, C.: Sequence of puff formation in Rhynchosciara polytene chromosomes. Chromosoma (Berl.) 23, 255–270 (1968).
Melli, M., Bishop, J. O.: Hybridization between rat liver DNA and complementary RNA. J. molec. Biol. 40, 117–136 (1969).
Nonato, E. F., Pavan, C.: A new species of Rhynchosciara, Rübsamen 1894 (Diptera, Mycetophilidae sp.). Rev. bras. Biol. 11, 435–437 (1951).
Ohno, S., Kaplan, W. D., Kinosita, R.: Demonstration of bipartite spiral structure on spermatogonial anaphase chromosomes of Mus musculus. Exp. Cell Res. 15, 426–428 (1958).
Östergren, G., Prakken, R.: Behaviour on the spindle of the actively mobile chromosome ends of rye. Hereditas (Lund) 32, 473–494 (1946).
Pardue, M. L., Gall, J. G.: Molecular hybridization of radioactive DNA to the DNA of cytological preparations. Proc. nat. Acad. Sci. (Wash.) 64, 600–604 (1969).
—: Chromosomal localization of mouse satellite DNA. Science 168, 1356–1358 (1970).
—, Gerbi, S. A., Eckhardt, R. A., Gall, J. G.: Cytological localization of DNA complementary to ribosomal RNA in polytene chromosomes of Diptera. Chromosoma (Berl.) 29, 268–290 (1970).
Prakken, R., Müntzing, A.: A meiotic peculiarity in rye, simulating a terminal centromere. Hereditas (Lund) 28, 441–482 (1942).
Rae, P. M. M.: The chromosomal distribution of rapidly reannealing DNA in Drosophila melanogaster. Proc. nat. Acad. Sci. (Wash.) 67, 1018–1025 (1970).
Ribbands, C. R.: Meiosis in Diptera. I. Prophase associations of non-homologous chromosomes, and their relation to mutual attraction between centromeres, centrosomes, and chromosomal ends. J. Genet. 41, 411–442 (1941).
Robertson, F. W., Chipehase, M., Nguyen, T. M.: The comparison of differences in reiterated sequences by RNA-DNA hybridization. Genetics 63, 369–385 (1969).
Rudkin, G. T., Corlette, S. L.: Disproportionate synthesis of DNA in a polytene chromosome region. Proc. nat. Acad. Sci. (Wash.) 43, 964–968 (1957).
Schildkraut, C. L., Maio, J. J.: Studies on the intranuclear distribution and properties of mouse satellite DNA. Biochim. biophys. Acta (Amst.) 161, 76–93 (1968).
—, Marmur, J., Doty, P.: Determination of the base composition of deoxyribonucleic acid from its buoyant density in CsCl. J. molec. Biol. 4, 430–443 (1962).
Schrader, F.: Touch-and-go pairing in chromosomes. Proc. nat. Acad. Sci. (Wash.) 26, 634–636 (1940).
Swift, H.: Nucleic acids and cell morphology. In: The molecular control of cellular activity (J. M. Allen, ed.). New York: McGraw-Hill Book Co. 1962.
Szybalski, W.: Use of cesium sulfate for equilibrium density gradient centrifugation. In: Methods in enzymology XII B (L. Grossman and K. Moldave, eds.). New York: Academic Press Inc. 1968.
Walker, P. M. B., McLaren, A.: Fractionation of mouse deoxyribonucleic acid on hydroxyapatite. Nature (Lond.) 208, 1175–1179 (1965).
Waring, M., Britten, R. J.: Nucleotide sequence repetition. A rapidly reassociating fraction of mouse satellite DNA. Science 154, 791–793 (1966).
Warters, M., Griffen, A. B.: The telomeres of Drosophila. J. Hered. 41, 182–190 (1950).
Wells, R. D., Blair, J. E.: Studies on polynucleotides. LXXI. Sedimentation and buoyant density studies of some DNA-like polymers with repeating nucleotide sequences. J. molec. Biol. 27, 273–288 (1967).
Yasmineh, W. G., Yunis, J. J.: Satellite DNA in autosomal heterochromatin. J. Cell Biol. 43, 161 a (1969 a).
—: Satellite DNA in mouse autosomal heterochromatin. Biochem. biophys. Res. Commun. 35, 779–782 (1969b).
—: Localization of mouse satellite DNA in constitutive heterochromatin. Exp. Cell Res. 59, 69–75 (1970).
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Eckhardt, R.A., Gall, J.G. Satellite DNA associated with heterochromatin in Rhynchosciara . Chromosoma 32, 407–427 (1971). https://doi.org/10.1007/BF00285252
Received:
Issue Date:
DOI: https://doi.org/10.1007/BF00285252