Abstract
The actI gene, encoding a component of the actinorhodin polyketide synthase of Streptomyces coelicolor, was used to identify and clone a homologous 11.7 kb BamHI DNA fragment from Saccharopolyspora hirsuta 367. The cloned fragment complemented actinorhodin production in a strain of Streptomyces coelicolor bearing a mutant actI gene. The DNA sequence of a 5.1 kb fragment revealed 6 open reading frames (ORF). ORF1 does not resemble any known DNA or deduced protein sequence, while the deduced protein sequence of ORF2 resembles that of biotin carboxyl carrier proteins. Based on the similarity to deduced protein sequences from cloned genes of polyketide producers, ORF3 would code for a ketoreductase, ORF4 and ORF5 for the putative heterodimeric β-ketoacyl synthase, and ORF6 for an acyl carrier protein.
References
Adamidis T, Riggle P, Champness W (1990) Mutations in a new Streptomyces coelicolor locus which globally block antibiotic biosynthesis but not sporulation. J Bacteriol 172:2962–2969
Arrowsmith TJ, Malpartida F, Sherman DH, Birch A, Hopwood DA, Robinson JA (1992) Characterization of actI-homologous DNA encoding polyketide synthase genes from the monensin producer Streptomyces cinnamonensis. Mol Gen Genet 234:254–264
Bibb MJ, Biro S, Motamedi H, Collins JF, Hutchinson CR (1989) Analysis of the nucleotide sequence of the Streptomyces glaucescens tcmI genes provides key information about the enzymology of polyketide antibiotic biosynthesis. EMBO J 8:2727–2736
Davis NK, Chater KF (1990) Spore colour in Streptomyces coelicolor A(3)2 involves the developmentally regulated synthesis of a compound biosynthetically related to polyketide antibiotics. Mol Microbiol 4:1679–1691
Devereux J, Haeberli P, Smithies O (1984) A compherensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12:387–305
Fernandez-Moreno MA, Martinez E, Boto L, Hopwood DA, Malpartida F (1992) Nucleotide sequence and deduced functions of a set of co-transcribed genes of Streptomyces coelicolor A(3)2 including polyketide synthase for the antibiotic actinorhodin. J Biol Chem 267:19728–19290
Haket J Jr, Desmarais D, Mehindate K, Déry CV (1990) Saccharopolyspora hirsuta strain 367 releases JHJ-1, a bacteriophage capable of propagation on old mycelium. J Gen Microbiol 136:573–579
Hallam SE, Malpartida F, Hopwood DA (1988) Nucleotide sequence, transcription and deduced function of a gene involved in polyketide antibiotic synthesis in Streptomyces coelicolor. Gene 74:305–320
Hopwood DA, Sherman DH (1990) Molecular genetics of polyketides and its comparison to fatty acid biosynthesis. Annu Rev Genet 24:37–66
Hopwood DA, Bibb MJ, Chater KF, Kieser T, Bruton CJ, Kieser HM, Lydiate DJ, Smith CP, Ward JM, Schrempf H (1985) Genetic manipulation of Streptomyces, A laboratory manual. The John Innes Foundation, Norwich, UK
Hutchinson CR, Borell CW, Donovan MJ, Kato F, Motamedi H, Nakayama H, Rubin RL, Streicher SL, Summers RG, Wendt-Pienkowski E, Wessel WL (1991) The genetic and biochemical basis of polyketide metabolism in microorganisms and its role in drug discovery and development. Planta Med 57:S36-S43
Karn J, Matthes HWD, Gait MJ, Brenner S (1984) A new selective phage cloning vector, Lambda 2001, with sites for XbaI, BamHI, HindIII, EcoRI, SstI and XhoI. Gene 32:217–224
Katz E, Thompson CJ, Hopwood DA (1983) Cloning and expression of the tyrosine gene from Streptomyces antibioticus and Streptomyces lividans. J Gen Microbiol 129:2703–2714
Knowles JR (1989) The mechanisms of biotin-dependent enzymes. Annu Rev Biochem 58:195–221
Li SJ, Cronan JE Jr (1992) The gene encoding the biotin carboxylase subunit of Escherichia coli acetyl CoA carboxylase. J Biol Chem 267:855–863
Malpartida F, Hopwood DA (1986) Physical and genetic characterisation of the gene cluster for antibiotic actinorhodin in Streptomyces coelicolor A3(2). Mol Gen Genet 205:66–73
Malpartida F, Hallam SE, Kieser HM, Motamedi H, Hutchinson CR, Butler MJ, Sungden DA, Warren M, McKillop C, Bailey CR, Humphreys GO, Hopwood DA (1987) Homology between Streptomyces genes coding for synthesis of different polyketides used to clone antibiotic biosynthetic genes. Nature 325:818–821
Murtif VL, Bahler CR, Samols D (1985) Cloning and expression of the 1.3S biotin-containing subunit of transcarboxylase. Proc Natl Acad Sci USA 82:5617–5621
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning. A laboratory manual. 2nd Edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
Samols D, Thorton CG, Murtif VL, Kunar GK, Haase FC, Wood HG (1988) Evolutionary conservation among biotin enzymes. J Biol Chem 263:6461–6464
Schwarz E, Oesterhelt, D, Reinke H, Beyreuther, K, Dimroth, P (1988) The sodium ion translocating oxalacetate decarboxylase of Klebsiella pneumoniae. J Biol Chem 263:9640–9645
Sherman DH, Malpartida F, Bibb MJ, Kieser HM, Bibb MJ, Hopwood DA (1989) Structure and deduced function of the granaticin-producing polyketide synthase gene cluster of Streptomyces violaceoruber Tü22. EMBO J 8:2717–2725
Whaley HA, Chidester CG, Mizsak SA, Wnuk RJ (1980) Nodusmicin: the structure of a new antibiotic. Tetrahedron Lett 21:3659–3662
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Communicated by J. Lengeler
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Le Gouill, C., Desmarais, D. & Déry, C.V. Saccharopolyspora hirsuta 367 encodes clustered genes similar to ketoacyl synthase, ketoacyl reductase, acyl carrier protein, and biotin carboxyl carrier protein. Molec. Gen. Genet. 240, 146–150 (1993). https://doi.org/10.1007/BF00276894
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DOI: https://doi.org/10.1007/BF00276894