Summary
The purpose of this study was to compare the transcriptional effects of two mutations, nin5 and byp, which map between genes P and Q and allow phage λ to grow in the absence of the N gene product. Presumably, these mutations permit the transcription to proceed through gene Q by eliminating a hypothetical transcriptional terminator, t R2, which is supposed to be suppressed by the N product. Mutation byp might not be fully efficient in eliminating the t R2 terminator, since an additional promoter-creating mutation, c17 in the y region, is required to make it effective, whereas the nin5 deletion acts as an N-bypass even in the absence of the c17 mutation.
To compare the effects of nin5 and byp, three singly lysogenic strains W3350(λc17P −), W3350(λc17P −nin5Q−) and W3350(λc17P −bypQ−) were constructed, and their constitutive, c17-promoted, rightward transcription was analyzed in the noninduced prophage state, when the control genes N, P and Q were inactive, either repressed or mutated. Comparison of transcription in three consecutive regions, y-O-P, Q-S-R and A-J, leads to following conclusions. (1) The λc17P -lysogen transcription is restricted to the first, c17-proximal region confirming the presence of the t R2 terminator. (2) Both the nin5 and byp lysogens permit the transcription to proceed into the Q-S-R region suggesting that these mutations eliminate the t R2 terminator. (3) Very little if any transcription was observed in the A-J region suggesting a presence of some transcriptional block beyond gene Q. (4) Transcription in the Q-S-R region of the nin5 lysogen was three times higher than that for the byp lysogen, which might explain why the nin5 mutants do not require the auxiliary c17 promoter. (5) Surprisingly, transcription of the y-O-P region in nin5 lysogens is higher than in byp lysogens, despite the fact that the nin5 deletion removes about half of the y-O-P region. Thus, the detailed mechanism of the augmented Q transcription in nin5 lysogens remains obscure.
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Bøvre, K., Lozeron, H. A., Szybalski, W.: Techniques of RNA-DNA hybridization in solution for the study of viral transcription. Meth. Virology (K. Maramorosch and H. Koprowshi, eds) 5, 271–292 (1971).
Bøvre, K., Szybalski, W.: Multistep DNA-RNA hybridization techniques. Meth. Enzymol. (L. Grossman and K. Moldave, eds) 21, 350–383 (1971).
Bremer, H., Yuan, D.: RNA chain growth-rate in Escherichia coli. J. molec. Biol. 38, 163–180 (1968).
Butler, B., Echols, H.: Regulation of bacteriophage λ development by gene N: properties of a mutation that bypass N control of late protein synthesis. Virology 40, 212–222 (1970).
Calendar, R.: The regulation of phage development. Ann. Rev. Microbiol. 24, 241–296 (1970).
Campbell, A.: Sensitive mutants of bacteriophage λ. Virology 14, 22–32 (1961).
Court, D., Sato, K.: Studies of novel transducing variants of lambda: dispensability of gene N and Q. Virology 39, 348–352 (1969).
Dove, W. F.: The genetics of the lambdoid phages. Ann. Rev. Genet. 2, 305–340 (1968).
Dove, W. F., Hargrove, E., Ohashi, M., Haughi, F., Guha, A.: Replicator activation in lambda. Jap. J. Genet. 44, Suppl. 1, 11–22 (1969).
Echols, H., Joyner, J. A.: The temperature phages. In: H. Frankel-Conrat, ed., the molecular basis of virology, p. 559. New York: Reinhold 1968.
Eisen, H. A., Fuerst, C. R., Siminovitch, L., Thomas, R., Lambert, L., Pereira da Silva, L., Jacob, F.: Genetics and physiology of defective lysogeny in K12(λ): Study of early mutants. Virology 30, 224–241 (1966).
Fiandt, M., Hradecna, Z., Lozeron, H. A., Szybalski, W.: Electron micrographic mapping of deletions, insertions, inversions and homologies in the DNAs of coliphage lambda and phi 80. The bacteriphage lambda, p. 329–354 (1971).
Franklin, N. C., Dove, W. F., Yanofsky, C.: The linear insertion of a prophage into the chromosome of E. coli shown by deletion mapping. Biochem. biophys. Res. Commun. 18, 910–923 (1965).
Heinemann, S. F., Spiegelman, W. G.: Role of the gene N product in phage lambda. Cold Spr. Harb. Symp. quant. Biol. 35, 315–318 (1970).
Herskowitz, I., Signer, E.: Control of transcription from the r-strand of bacteriophage lambda. Cold Spr. Harb. Symp. quant. Biol. 35, 355–368 (1970).
Hopkins, N.: Bypassing a positive regulator: isolation of a λ mutant that does not required N product to grow. Virology 40, 223–229 (1970).
Kaiser, A. D.: Mutations in a temperate bacteriophage affecting its ability to lysogenize Escherichia coli. Virology 3, 42–61 (1957).
Kumar, S., Bøvre, K., Guha, A., Hradecna, Z., Maher, V. M., Szybalski, W.: Orientation and control of transcription in E. coli phage λ. Nature (Lond.) 221, 823–825 (1969).
Kumar, S., Calef, E., Szybalski, W.: Regulation of the transcription of Escherichia coli phage λ by its early gene N and tof. Cold Spr. Harb. Symp. quant. Biol. 35, 331–340 (1970).
Kumar, S., Szybalski, W.: Transcription of the λdv plasmid and inhibition of λ phages in λdv carrier cells of Escherichia coli. Virology 41, 665–679 (1970).
Matsushiro, A.: Specialized transduction of tryptophan markers in Escherichia coli K12 by bacteriophage ϕ80. Virology 19, 475–482 (1963).
Nijkamp, H. J. J., Bøvre, K., Szybalski, K.: Controls of rightward transcription in coliphage λ. J. molec. Biol. 54, 599–604 (1970).
Nijkamp, H. J. J., Szybalski, W., Ohashi, M., Dove, W. F.: Gene expression by constitutive mutants of coliphage lambda. Molec. gen. Genet. 114, 80–88 (1971).
Packman, S., Sly, W.: Constitutive λ DNA replication by λc17, a regulator mutant related to virulence. Virology 34, 778–789 (1968).
Pereira da Silva, L. H., Jacob, F.: Etude génétique d'une mutation modifiant la sensibilité á l'immunité chez le bacteriophage lambda. Ann. Inst. Pasteur 115, 145–158 (1968).
Radding, C. M.: The genetic control of phage-induced enzymes. Ann. Rev. Genet. 3, 363–394 (1969).
Radding, C. M., Echols, H.: The role of the N gene of phage λ in the synthesis of two phagespecific proteins. Proc. nat. Acad. Sci. (Wash.) 60, 707–712 (1968).
Roberts, J. W.: Termination factor for RNA synthesis. Nature (Lond) 224, 1168–1174 (1969).
Sato, K., Nishimune, Y., Sato, M., Numick, R., Matsushiro, A., Inokuchi, H., Ozeki, H.: Suppressor-sensitive mutants of coliphage ϕ80. Virology 34, 637–649 (1968).
Signer, E. R.: Recombination between coliphages λ and ϕ80. Virology 22, 650–651 (1964).
Stevens, W. F., Adhya, S., Szybalski, W.: Origin and bidirectional orientation of DNA replication in coliphage lambda. In: The bacteriophage lambda (A. D. Hershey, ed.). Cold Spring Harbor Laboratories, p. 515–533 (1971).
Szybalski, W.: Sampling of virus particles and macromolecules sedimented in an equilibrium density gradient. Experientia (Basel) 16, 164 (1960).
Szybalski, W.: Transcription and replication in E. coli bacteriophage lambda. In: Uptake of informative molecules by living cells (L. Ledoux, Ed.). p. 59–82. Amsterdam: North-Holland Publ. 1972.
Szybalski, W., Bøvre, K., Fiandt, M., Guha, A., Hradecna, Z., Kumar, S., Lozeron, H. A., Maher, V. M., Nijkamp, H. J. J., Summers, W. C., Taylor, K.: Transcriptional controls in developing bacteriophages. J. cell. Physiol. 74, Suppl. 1, 33–70 (1969).
Szybalski, W., Bøvre, K., Fiandt, M., Hayes, S., Hradecna, Z., Kumar, S., Lozeron, H. A., Nijkamp, H. J. J., Stevens, W. F.: Transcriptional units and their controls in Escherichia coli phage λ: Operons and scriptons. Cold Spr. Harb. Symp. quant. Biol. 35, 341–353 (1970).
Szybalski, W., Szybalski, E. H.: Equilibrium density gradient centrifugation. In: Procedures in nucleic acid research, vol. 2 (G. L. Cantoni and D. R. Davies, eds). p. 311–354. New York: Harper &; Row 1971.
Thomas, R.: Control of development in temperate bacteriophages. I. Induction of prophage genes following heteroimmune superinfection. J. molec. Biol. 22, 79–95 (1966).
Thomas, R.: Control of development in temperate bacteriophages. III. Which prophage genes are and which are not trans-activable in the presence of immunity. J. molec. Biol. 49, 393–404 (1970).
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Mark, KK. Effect of the N-bypass mutations nin and byp on the rightward transcription in coliphage lambda. Molec. Gen. Genet. 124, 291–304 (1973). https://doi.org/10.1007/BF00267659
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DOI: https://doi.org/10.1007/BF00267659