Skip to main content
Log in

Antibodies against a fused gene product identify the protein encoded by a group 11 yeast mitochondrial intron

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

In the mitochondrial genome of Saccharomyces cerevisiae, introns all and aI2 of the gene encoding the COX1 subunit are the only group 11 introns with open reading frames (ORFs); these can be translated into two homologous proteins, the maturase aI1 and aI2. These proteins are structurally related to viral reverse transcriptases and have been shown genetically to be involved in pre-mRNA splicing and in the deletion of introns from mitochondrial DNA. To identify these mitochondrial proteins and study their properties more directly, we raised antibodies against a part of the intron aI2 ORF translation product. For this purpose, we constructed series of fusion genes, by joining parts of the genes for protein A or lacZ to different portions of the intron aI2. These were expressed in Escherichia coli as hybrid polypeptides, which were used for the production and identification of specific antibodies against the yeast mitochondrial protein. The antibodies recognized the 57 kDa protein (maturase aI2) that accumulates in two yeast mutants deficient in the splicing of a12. This protein corresponds to the translation product of the 3′ part of intron aI2 and accumulates unaltered in the two cis-acting mutants.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Anziano PQ, Hanson DK, Malher HL, Perlman PS (1982) Functional domains in introns: trans-acting and cis-acting regions of intron 4 of the cob gene. Cell 30:925–932

    Google Scholar 

  • Banroques J, Delahodde A, Jacq C (1986) A mitochondrial RNA maturase gene transferred to the yeast nucleus can control mitochondrial mRNA splicing. Cell 46:837–844

    Google Scholar 

  • Bonitz SG, Berlani R, Coruzzi G, Li M, Macino G, Nobrega F, Nobrega MP, Thalenfeld BE, Tzagoloff A (1980a). Codon recognition rules in yeast mitochondria. Proc Natl Acad USA 77:3167–3170

    Google Scholar 

  • Bonitz SG, Coruzzi G, Thalenfeld BE, Tzagoloff A, Macino G (1980b) Assembly of the mitochondrial membrane system: structure and nucleotide sequence of the gene coding for subunit I of yeast cytochrome oxidase. J Biol Chem 255:11927–11941

    Google Scholar 

  • Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of proteins utilizing the principle of protein-dye binding. Anal Biochem 72:248–254

    Article  CAS  PubMed  Google Scholar 

  • Carignani G, Groudinsky O, Frezza D, Schiavon E, Bergantino E, Slonimski PP (1983) A mRNA maturase is encoded by the first intron of the mitochondrial gene for the subunit I of cytochrome oxidase in Saccharomyces cervisiae. Cell 35:733–742

    Google Scholar 

  • Carignani G, Netter P, Bergantino E, Robineau S (1986) Expression of the mitochondrial split gene coding for cytochrome oxidase subunit I in S. cerevisiae. Curr Genet 11:55–63

    Google Scholar 

  • Carter P, Bedouelle H, Winter G (1985) Improved oligonucleotide site-directed mutagenesis using M13 vectors. Nucleic Acids Res 13:4431–4443

    Google Scholar 

  • Cech T, Bass B (1986) Bioligical catalysis by RNA. Annu Rev Biochem 55:599–629

    Google Scholar 

  • Colleaux L, d'Auriol L, Betermier M, Cottarel G, Jacquier A, Galibert F, Dujon B (1986) Universal code equivalent of a yeast mitochondrial intron reading frame is expressed in E. coli as a specific double strand endonuclease. Cell 44:521–533

    Google Scholar 

  • Delahodde A, Banroques J, Goguel V, Becam AM, Perea J, Schroeder R, Jacq C (1985) Purification of yeast bI4 mRNA maturase from E. coli and from yeast. Nucleic acids binding properties. In: Quagliariello E, Slater EC, Palmieri F, Saccone C, Kroon AM (eds) Achievements and perspectives in mitochondrial research, vol 2., Elsevier, Amsterdam, pp 79–88

    Google Scholar 

  • Delahodde A, Goguel V, Becam AM, Creusot F, Perea J, Banroques J, Jacq C (1989) DNA endonuclease and RNA maturase activities of two homologous intron encoded proteins from yeast mitochondria. Cell 56:431–441

    Google Scholar 

  • De la Salle H, Jacq C, Slonimski PP (1982) Critical sequences within mitochondrial introns: pleiotropic mRNA maturase and cis-dominant signals of the box intron controlling reductase and oxidase. Cell 28:721–732

    Google Scholar 

  • Dujon B (1989) Group I introns as mobile genetic elements: facts and mechanistic speculations — a review. Gene 82:91–114

    Google Scholar 

  • Gargouri AF (1989) Recherces sur les introns de l'ADN mitochondrial chez la levure Saccharomyces cerevisiae: mutations, suppressions et deletions génomiques d'introns. These de Doctorat d'Etat es Sciences Naturelles, Université Pierre et Marie Curie (Paris 6), France

    Google Scholar 

  • Gargouri A, Lazowska J, Slonimski PP (1983) DNA splicing of introns in a gene: a general way of reverting intron mutations. In: Schweyen R, Wolf K, Kaudewitz F (eds) Mitochondria 1983, Nucleo-mitochondrial interaction. De Gruyter, Berlin, pp 259–268

    Google Scholar 

  • Hudspeth MES, Ainlay WM, Shurnard DS, Butow RA, Grossmann LI (1982) Location and structure of the var1 gene on yeast mitochondrial DNA: nucleotide sequence of the 40.0 allele. Cell 30:617–626

    Google Scholar 

  • Jacq C, Pajot P, Lazowska J, Dujardin G, Claisse M, Groudinsky O, De la Salle H, Grandchamp C, Labouesse M, Gargouri A, Guiard B, Spyridakis A, Dreyfus M, Slonimski PP (1982) Role of introns in the yeast cytochrome b gene: cis- and trans-acting signals, intron manipulation, expression and intergenic communications. In: Slonimski PP, Attardi G, Borst P (eds) Mitochondrial genes. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 155–183

    Google Scholar 

  • Jacquier A, Dujon B (1985) An intron-encoded protein is active in a gene conversion process that spreads an intron into a mitochondrial gene. Cell 41:383–394

    Google Scholar 

  • Jequíer A, Michel F (1987) Multiple exon-binding sites in class II self-splicing introns. Cell 50:17–29

    Google Scholar 

  • Kotylak Z, Slonimski PP (1977) Mitochondrial mutants isolated by a new screening method based upon the use of the nuclear mutation opt. In: Bandlow W, Schweyen RJ, Wolf K, Kaudewitz F (eds) Mitochondria 1977; Genetics and biogenesis of mitochondria. De Gruyter, Berlin, pp 83–89

    Google Scholar 

  • Lambowitz AM (1989) Infectious introns. Cell 56:323–326

    Google Scholar 

  • Lazowska J, Jacq C, Slonimski PP (1980) Sequence of introns and flanking exons in wild type and box3 mutants of cytochrome b reveals an interlaced splicing protein coded by an intron. Cell 22:333–348

    Google Scholar 

  • Lazowska J, Claisse M, Gargouri A, Kotylak Z, Spyridakis A, Slonimski PP (1989) Protein encoded by the third intron of cytochrome b in Saccharomyces cerevisiae is a mRNA maturase. J Mol Biol 205:275–289

    Google Scholar 

  • Levra-Juillet E, Boulet A, Séraphin B, Simon M, Faye G (1989) Mitochondrial introns all and/or a12 are needed for the in vivo deletion of intervening sequences. Mol Gen Genet 217:168–171

    Google Scholar 

  • Locker J, Morimoto R, Synenky RM, Rabinowitz M (1979) Analysis of mitochondrial RNA in Saccharomyces cerevisiae. Curr Genet 1:163–172

    Google Scholar 

  • Macreadic IG, Scott RM, Zinn AR, Butow RA (1985) Transposition of an intron in yeast mitochondria requires a protein encoded by that intron. Cell 41:395–402

    Google Scholar 

  • Meunier B, Tian GL, Macadre C, Slonimski PP, Lazowska J (1990) Group II introns transpose in yeast mitochondria. In: Quagliariello E, Papa S, Palmieri F, Saccone C (eds), Structure, function and biogenesis of energy transfer systems. Elsevier Science Publishers BV, pp 169–174.

  • Michel F, Dujon B (1983) Conservation of RNA secondary structures in two intron families including mitochondrial-, chloroplast- and nuclear encoded members. EMBO J 2:33–38

    Google Scholar 

  • Michel F, Lang BF (1985) Mitochondrial class II introns encode proteins related to the reverse transcriptases of retroviruses. Nature 316:641–643

    Google Scholar 

  • Michel F, Umesono K, Ozeki H (1989) Comparative and functional anatomy of group II catalytic introns - a review. Gene 82:5–30

    Google Scholar 

  • Misra R, Reeves P (1984) Intermediates in the synthesis of TOIC protein include an incomplete peptide stalled at Arg codon. Eur J Biochem 152:151–155

    Google Scholar 

  • Queen C (1983) A vector that uses phage signals for efficient synthesis of proteins in Escherichia coli. J Mol Appl Genet 2:1–10

    Google Scholar 

  • Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5467

    CAS  PubMed  Google Scholar 

  • Smith DE, Fisher PA (1984) Identification, developmental regulation and response to heat shock of the antigenetically related forms of a major nuclear envelope protein in Drosophila embryos: application of an improved method for affinity purification of antibodies using polypeptides immobilized on nitrocellulose blots. J Cell Biol 99:20–28

    Google Scholar 

  • Uhlén M, Nilsson B, Guss B, Lindberg M, Gatenbeck S, Philipson L (1983) Gene fusion vectors based on the gene for staphylococcal protein A. Gene 23:369–378

    Google Scholar 

  • Weiss-Brummer B, Rodel G, Schweyen RJ, Kaudewitz F (1982) Expression of the split gene cob in yeast: evidence for a precursor of a “maturase” protein translated from intron 4 and preceding exons. Cell 29:527–536

    Google Scholar 

  • Wenzlau JM, Saldanha RJ, Butow RA, Perlman PS (1989) A latent intron-encoded maturase is also an endonuclease needed for intron mobility. Cell 56:421–430

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by W. Gajewski

Rights and permissions

Reprints and permissions

About this article

Cite this article

Bergantino, E., Carignani, G. Antibodies against a fused gene product identify the protein encoded by a group 11 yeast mitochondrial intron. Molec. Gen. Genet. 223, 249–257 (1990). https://doi.org/10.1007/BF00265061

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00265061

Key words

Navigation