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Structural aspects of the soluble NAD-dependent hydrogenase isolated from Alcaligenes eutrophus H16 and from Nocardia opaca 1b

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Abstract

The soluble NAD-dependent hydrogenase (hydrogen-NAD oxidoreductase, EC 1.12.1.2), consisting of four non-identical subunits, was isolated from Alcaligenes eutrophus H16 and from Nocardia opaca 1b and analyzed by a HPLC gel permeation technique and electron microscopy. The tetrameric enzyme particles from both origins, as determined from negatively stained electron microscopic samples, were found to be elongated and very similar in shape and size. The A. eutrophus enzyme was measured in more detail. It exhibited dimensions of 12.7 nm by 5.5 nm (axial ratio 2.3:1). Dissociation into smaller particles and unspecific aggregation combined with partial inactivation were observed in the presence of the inhibitor NADH. Kept in buffer without added nickel, the enzyme was partially dissociated. Reassociation of tetramers without restored enzyme activity was achieved by addition of 0.5 mM NiCl2. A working model for the structural organization of the tetrameric enzyme particle is presented.

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References

  • Aggag M, Schlegel HG (1974) Studies on a gram-positive hydrogen bacterium, Nocardia opaca 1b. III. Purification, stability and some properties of the soluble hydrogen dehydrogenase. Arch Microbiol 100:25–39

    Google Scholar 

  • Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye-binding. Anal Biochem 72:248–254

    Google Scholar 

  • Friedrich B, Heine E, Finck A, Friedrich C (1981) Nickel requirement for active hydrogenase formation in Alcaligenes eutrophus. J Bacteriol 145:1144–1149

    Google Scholar 

  • Friedrich CG, Schneider K, Friedrich B (1982) Nickel in the catalytically active hydrogenase in Alcaligenes eutrophus. J Bacteriol 152:42–48

    Google Scholar 

  • Friedrich CG, Suetin S, Lohmeyer M (1984) Nickel and iron incorporation into soluble hydrogenase of Alcaligenes eutrophus. Arch Microbiol 140:206–211

    Google Scholar 

  • Gerberding H, Mayer F (1989) Structural organization of the membrane-bound hydrogenase from Alcaligenes eutrophus as revealed by electron microscopy. FEMS Microbiol Lett 60:159–164

    Google Scholar 

  • Johannssen W, Schütte H, Mayer F, Mayer H (1979) Quaternary structure of the isolated restriction endonuclease EndoR · BglI from Bacillus globigii as revealed by electron microscopy. J Mol Biol 134:707–726

    Google Scholar 

  • Schink B, Schlegel HG (1979) The membrane-bound hydrogenase of Alcaligenes eutrophus. I. Solubilization, purification and biochemical properties. Biochim Biophys Acta 567:315–323

    Google Scholar 

  • Schink B, Schlegel HG (1980) The membrane-bound hydrogenase of Alcaligenes eutrophus. II. Localization and immunological comparison with other hydrogenase systems. Antonie van Leeuwenhoek 46:1–14

    Google Scholar 

  • Schlegel HG, Kaltwasser H, Gottschalk G (1961) Ein Submersverfahren zur Kultur wasserstoffoxydierender Bakterien: wachstumsphysiologische Untersuchungen. Arch Mikrobiol 38:209–222

    Google Scholar 

  • Schneider K, Cammack R (1978) Soluble hydrogenase from Alcaligenes eutrophus, an iron-sulfur flavoprotein. In: Schlegel HG, Schneider K (eds) Hydrogenases: Their catalytic activity, structure and function. Goltze, Göttingen, pp 221–234

    Google Scholar 

  • Schneider K, Schlegel HG (1976) Purification and properties of the soluble hydrogenase from Alcaligenes eutrophus H16. Biochim Biophys Acta 452:66–80

    Google Scholar 

  • Schneider K, Schlegel HG (1978) Identification and quantitative determination of the flavin component of soluble hydrogenase of Alcaligenes eutrophus. Biochem Biophys Res Commun 84:564–571

    Google Scholar 

  • Schneider K, Schlegel HG (1981) Production of superoxide radicals by soluble hydrogenase from Alcaligenes eutrophus H16. Biochem J 193:99–107

    Google Scholar 

  • Schneider K, Cammack R, Schlegel HG, Hall DO (1979) The ironsulphur centres of soluble hydrogenase from Alcaligenes eutrophus. Biochim Biophys Acta 578:445–461

    Google Scholar 

  • Schneider K, Pinkwart M, Jochim K (1983a) Purification of hydrogenases by affinity chromatography on Procion Red-agarose. Biochem J 213:391–398

    Google Scholar 

  • Schneider K, Patil DS, Cammack R (1983b) ESR properties of membrane-bound hydrogenase from aerobic hydrogen bacteria. Biochim Biophys Acta 748:353–361

    Google Scholar 

  • Schneider K, Schlegel HG, Jochim K (1984a) Effect of nickel on activity and subunit composition of purified hydrogenase from Nocardia opaca 1b. Eur J Biochem 138:533–541

    Google Scholar 

  • Schneider K, Cammack R, Schlegel HG (1984b) Content and localization of FMN, Fe-S clusters and nickel in the NAD-linked hydrogenase of Nocardia opaca 1b. Eur J Biochem 142:75–84

    Google Scholar 

  • Tran-Betcke A, Warnecke U, Böcker C, Zaborosch C, Friedrich B (1990) Cloning and nucleotide sequeces of the genes for the subunits of NAD-reducing hydrogenase of Alcaligenes eutrophus H16. J Bacteriol 172:2920–2929

    Google Scholar 

  • Tsuprun VL, Utkin IB, Popov VO, Egorov AM, Berezin IV, Kiselev NA (1986) Electron microscopy of the hydrogenase from the hydrogen-oxidizing bacterium Alcaligenes eutrophus Z1. FEBS Lett 197:225–228

    Google Scholar 

  • Valentine RC, Shapiro BM, Stadtman ER (1968) Regulation of glutamine synthetase XII. Electron microscopy of the enzyme from Escherichia coli. Biochemistry 7:2143–2152

    Google Scholar 

  • Weber K, Osborn M (1969) The reliability of molecular weight determination by dodecyl sulfate-polyacrylamide gel electrophoresis. J Biol Chem 244:4406–4412

    Google Scholar 

  • Zaborosch C, Schneider K, Schlegel HG, Kratzin H (1989) Comparison of the NH2-terminal amino acid sequences of the four non-identical subunits of the NAD-linked hydrogenases from Nocardia opaca 1b and Alcaligenes eutrophus H16. Eur J Biochem 181:175–180

    Google Scholar 

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Johannssen, W., Gerberding, H., Rohde, M. et al. Structural aspects of the soluble NAD-dependent hydrogenase isolated from Alcaligenes eutrophus H16 and from Nocardia opaca 1b. Arch. Microbiol. 155, 303–308 (1991). https://doi.org/10.1007/BF00252217

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  • DOI: https://doi.org/10.1007/BF00252217

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