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Molecular mapping of the ge s gene controlling the super-giant embryo character in rice (Oryza sativa L.)

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Abstract

The giant-embryo character is useful for quality improvement in rice. Three alleles controlling embryo size have been reported at the ge locus. Based on trisomic analysis, this locus is known to reside on chromosome 7. The objective of the present study was to identify linkage between molecular markers and the ge s gene using an existing molecular map of rice and an F2 population derived from Hwacheongbyeo-ge s (super-giant embryo)/Milyang 23. The bulked-segregant method was used to screen 38 RFLPs and two microsatellite markers from rice chromosome 7. RZ395 and CDO497 flanked the ge s gene, at 2.4 cM and 3.4 cM, respectively. The two microsatellite markers, RM18 and RM10, were linked with ge s at 7.7 cM and 9.6 cM, respectively. The availability of molecular markers will facilitate selection of this grain character in a breeding program and provide the foundation for map-based gene isolation.

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References

  • Ahn SN, Tanksley SD (1993) Comparative linkage maps of the rice and maize genomes. Proc Natl Acad Sci USA 90:7980–7984

    CAS  PubMed  Google Scholar 

  • Causse MA, Fulton TM, Cho YG, Ahn SN, Chunwongse J, Wu K, Xiao J, Yu Z, Ronald PC, Harritongton SE, Second O, McCouch SR, Tanksley SD (1994) Saturated molecular map of the rice genome based on an interspecific backcross population. Genetics 138:1251–1274

    CAS  PubMed  Google Scholar 

  • Clark JK, Sheridan WF (1991) Isolation and characterization of 51 embryo-specific mutations of maize. Plant Cell 3:935–951

    Google Scholar 

  • Coffman WR, Juliano BO (1987) Rice. In: Olson RA, Frey KJ (eds) Nutritional quality of cereal grains: genetic and agronomic improvement. American Society of Agronomy, Madison, Wisconsin, pp 101–131

    Google Scholar 

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13

    CAS  PubMed  Google Scholar 

  • Heu MH, Park SZ (1990) Breeding strategies for quality diversification in rice. Proc Symp Rice Quality, Crop Experimental Station, RDA, Korea 99:41–58

    Google Scholar 

  • Juliano BO (1985) Rice chemistry and technology, AACC Monograph Series, pp 17/2-174

  • Kim KH, Heu MH, Park SZ, Koh HJ (1991) New mutants for rice grain quality. Korean J Crop Sci 36:197–203

    Google Scholar 

  • Kim KH, Park SZ, Koh HJ, Heu HM (1992) New mutants for endosperm and embryo characters in rice: two dull endosperms and a giant embryo. Proc SABRAO Int Symp ‘Impact of Biological Research on Agricultural Productivity’, pp 125/2-131

  • Kinoshita T (1993) Current linkage maps. Rice Genet Newslett 10:17–32

    Google Scholar 

  • Koh HJ, Park SZ, Won YJ, Heu MH (1994) Nutritional and agronomic characteristics of super-giant embryo mutant in rice. Korean J Crop Sci 38:537–544

    Google Scholar 

  • Kosambi, DD (1944) The estimation of map distances from recombination values. Ann Eugen 12:172–175

    Google Scholar 

  • Kumamaru T, Satoh H, Iwata N, Omura T, Ogawa M, Tanaka K (1988) Mutants for rice storage proteins. 1. Screening of mutants for rice storage proteins of protein bodies in the starch endosperm. Theor Appl Genet 76:11–16

    Google Scholar 

  • Kurata N, Nagamura Y, Yamamoto K, Harushima Y, Sue N, Wu J, Antonio BA, Shomura A, Shimizu T, Lin SY, Inoue T, Fukuda A, Shimano T, Kuboki Y, Toyama T, Miyamoto Y, Kirihara T, Hayasaka K, Miyao A, Monna L, Zhong HS, Tamura Y, Wang ZX, Momma Y, Umehara Y, Yano M, Sasaki T, Minobe Y (1994) A 300-kilobase interval genetic map of rice including 883 expressed sequences. Nature Genet 8:365–372

    Google Scholar 

  • Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174–181

    CAS  PubMed  Google Scholar 

  • McCouch SR, Tanksley SD (1991) Development and use of restriction fragment length polymorphism in rice breeding and genetics. In: Khush GS, Toenniessen GH (eds) Rice biotechnology. CAB International and IRRI, Wallingford, Oxford, UK, pp 109–133

    Google Scholar 

  • McCouch SR, Kochert G, Yu ZH, Wang ZY, Khush GS, Coffman WR, Tanksley SD (1988) Molecular mapping of rice chromosomes. Theor Appl Genet 76:815–829

    CAS  Google Scholar 

  • Michelmore RW, Paran I, Kesseli KV (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88:9828–9832

    CAS  PubMed  Google Scholar 

  • Panaud O, Chen X, McCouch SR (1996) Development of rice SSLP markers and applications in breeding and evolutionary studies. Mol Gen Genet (in press)

  • Rutger JN (1981) Applications of induced and spontaneous mutation in rice breeding and genetics. Adv Agron 36:383–413

    Google Scholar 

  • Satoh H, Iwata N (1990) Linkage analysis in rice. On three mutant loci for endosperm properties, ge (giant embryo), du-4 (dull endosperm-4) and flo-1 (floury endosperm-1). Japan J Breed 40 (Suppl 2):268–269

    Google Scholar 

  • Satoh H, Omura T (1981) New endosperm mutations induced by chemical mutagen in rice, Oryza sativaL. Japan J Breed 31:316–326

    Google Scholar 

  • Scanlon MJ, Stinard PS, James MG, Myers AM, Robertson DS (1993) Genetic analysis of 63 mutations affecting maize kernel development isolated from Mutator stocks. Genetics 136:281–294

    Google Scholar 

  • Schaeffer GW, Sharpe FT (1987) Increased lysine and seed storage protein in rice plants recovered from calli selected with inhibitory levels of lysine plus threonine and S-(2-aminoethyl) cysteine. Plant Physiol 84:509–515

    Google Scholar 

  • Singh K, Ishii T, Parco A, Huang N, Brar DS, Khush GS (1996) Centromere mapping in rice (Oryza sativaL.). Proc Natl Acad Sci USA (in press)

  • Suh HS, Heu MH (1978) The segregation mode of plant height in the cross of rice varieties. II. Linkage analysis of the semidwarfness of rice variety „Tongil”. Korean J Breed 10:1–6

    Google Scholar 

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Communicated by G. E. Hart

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Koh, H.J., Heu, M.H. & McCouch, S.R. Molecular mapping of the ge s gene controlling the super-giant embryo character in rice (Oryza sativa L.). Theoret. Appl. Genetics 93, 257–261 (1996). https://doi.org/10.1007/BF00225754

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  • DOI: https://doi.org/10.1007/BF00225754

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