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Diffusion of short-chain molecules on metal surfaces

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Abstract

In this paper, we review our recent theoretical and simulation studies of the surface diffusion of n-alkanes, ranging in size from ethane to hexadecane, physically adsorbed on Pt(111). The model system exhibits many features seen experimentally. Through both animation of the molecular trajectories and determination of the minimum-energy path for nearest-neighbor hopping, we find that the shorter molecules (ethane through octane) all have similar diffusion mechanisms, involving coupled translation and rigid rod-like rotation in the surface plane. In addition, the diffusion energy barriers for these molecules increase nearly linearly with chain length in both the static and dynamic calculations. The diffusion of decane and hexadecane does not adhere to the trends for the shorter molecules and a decrease can be observed in the dynamical diffusion energies for these molecules. The diffusion of the longer molecules involves hops, with unique mechanisms, to second and third neighbor sites. Our static analysis has indicated, for decane, that the diffusion-energy barrier for third-neighbor hopping is lower than that for nearest-neighbor hopping and is in agreement with the trend seen in the dynamical diffusion barriers. Even though there is agreement between theoretical and simulated diffusion energy barriers for many of the molecules, the motion observed in the MD simulations does not agree with the assumptions of the hopping model. A model that can incorporate the influence of long flights would provide a more realistic description of the motion.

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References

  • Allen, M.P. and D.J. Tildesley, Computer Simulation of Liquids, Clarendon Press, Oxford, 1987.

    Google Scholar 

  • Allen, R.E., G.P. Alldredge, and F.W. deWette, “Studies of vibrational surface modes, II monoatomic fcc crystals,” Phys. Rev., B4, 1661 (1971).

    Google Scholar 

  • Arena, M.V., A.A. Deckert, J.L. Brand, and S.M. George, “Surface diffusion and desorption of pentane isomers on Ru(001),” J. Phys. Chem., 94, 6792 (1990).

    Google Scholar 

  • Brand, J.L., M.V. Arena, A.A. Deckert, and S.M. George, “Surface diffusion of n-alkanes on Ru(001),” J. Chem. Phys., 92, 5136 (1990).

    Google Scholar 

  • Brown, D. and J.H.R. Clarke, “A comparison of constant energy, constant temperature, and constant pressure ensembles in molecular dynamics simulations of atomic liquids,” Mol. Phys., 51, 1243 (1984).

    Google Scholar 

  • Catlow, C.R.A., S.C. Parker, and M.P. Allen, Computer Modelling of Fluids Polymers and Solids, NATO ASI Series C, Kluwer Academic Publishers, 1990.

  • Chen, Y. and K.A. Fichthorn, “Diffusion mechanisms of n-alkanes adsorbed on Pt(111),” (to be published).

  • Chesters, M.A., P. Gardner, and E.M. McCash, “The reflection-absorption infrared spectra of n-alkanes adsorbed on Pt(111),” Surf. Sci., 209, 89 (1989).

    Google Scholar 

  • Cohen, J.M. and A.F. Voter, “Self-diffusion on the Lennard-Jones fcc(111) surface: Effects of temperature on dynamcal corrections,” J. Chem. Phys., 91, 5082 (1989).

    Google Scholar 

  • Dobbs, K.D. and D. Doren, “Dynamics of molecular surface diffusion: Origins and consequences of long jumps,” J. Chem. Phys., 97, 3722 (1992).

    Google Scholar 

  • Evans, D.J., “Computer experiment for nonlinear thermodynamics of Couette flow,” J Chem. Phys., 78, 3297 (1983).

    Google Scholar 

  • Fichthorn, K.A., P. Balan, and Y. Chen, “Simulation and analysis of the motion of n-butane on Pt(111),” Surf. Sci., 317, 37 (1994).

    Google Scholar 

  • Firment, L.E. and G.E. Somorjai,., “Surface structures of normal paraffins and cyclohexane monolayers and thin crystals grown on the (111) crystal face of platinum: A low-energy electron diffraction study,” J. Chem. Phys., 66, 2901 (1977).

    Google Scholar 

  • Fixman, M., Proc. Nat. Acad. Sci., 71, 3050 (1974).

    Google Scholar 

  • Ganz, E.S., S.K. Thesis, I. Hwang, and J. Golvochenko, “Direct measurement of diffusion by hot tunneling microscopy: Activation energy, anisotropy, and long jumps,” Phys. Rev. Lett., 68, 1567 (1992).

    Google Scholar 

  • Hallmark, V.M., S. Chiang, K.-P. Meinhardt, and K. Hafner, “Observation and calculation of internal structure in scanning tunneling microscopy images of related molecules,” Phys. Rev. Lett., 70, 3740 (1993).

    Google Scholar 

  • Huang., D., Y. Chen, and K.A. Fichthorn, “The diffusion dynamics of short n-alkanes on smooth metal surfaces,” J. Chem. Phys., 101, 11021 (1994).

    Google Scholar 

  • Huang, D., P. Balan, Y. Chen, and K.A. Fichthorn, “Molecular-dynamics simulation of the diffusion of n-alkanes on Pt(111),” Molecular Simulation, 13, 285 (1994).

    Google Scholar 

  • Hoover, W.G., A.J.C. Ladd, and B. Moran,, “High strain rate plastic flow studied via nonequilibrium molecular dynamics,” Phys. Rev. Lett., 48, 1818 (1982).

    Google Scholar 

  • Ionova, I.V. and E.A. Carter,, “Ridge method for finding saddle points on potential energy surfaces,” J. Chem. Phys., 98, 6377 (1993).

    Google Scholar 

  • Liu, C.L., J.M. Cohen, J.B. Adams, and A.F. Voter, “EAM study of surface self-diffusion of single atoms on fcc metals Ni, Cu, Al, Ag, Au, Pd, and Pt,” Surf. Sci., 253, 334 (1991).

    Google Scholar 

  • Mills, G. and H. Jónsson, “A method for finding optimal transition paths: Application to diffusion on metal surfaces,” submitted to J. Chem. Phys.

  • Mills, G. and H. Jónsson, “Quantum thermal effects in H2 dissociative adsorption: Evaluation of free energy barriers in multidimensional systems,” Phys. Rev. Lett., 72, 1124 (1994)

    Google Scholar 

  • Nosé, S., “Constant temperature molecular dynamics methods,” Prog. Theor Phys., Supplement No. 103, 1 (1991).

  • Raut, J.S. and K.A. Fichthorn, “Tracer-diffusion coefficients for both localized and non-localized adsorption: Theory and molecular-dynamics simulation,” J. Chem. Phys., 103, 8694 (1995).

    Google Scholar 

  • Reutt-Robey, J.E., D.J. Doren, Y.J. Chabal, and S.B. Christman, “Microscopic CO diffusion on a Pt(111) surface by time-resolved infrared spectroscopy,” Phys. Rev. Lett., 61, 2778 (1988).

    Google Scholar 

  • Ryckaert, J.P. and A. Bellemans, “Molecular dynamics of liquid alkanes,” Faraday. Discuss. Chem. Soc., 66, 95 (1978).

    Google Scholar 

  • Ryckaert, J.P., G. Ciccotti, and H.J.C. Berendsen, “Numerical integration of the Cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes,” J. Comp. Phys., 23, 327 (1977).

    Google Scholar 

  • Salmeron, M. and G.A. Somorjai, “Adsorption and bonding of butane and pentane on the Pt(111) crystal surface: Effect of oxygen treatments and deuterium preadsorption,” J. Phys. Chem., 85, 3840 (1981).

    Google Scholar 

  • Sanders, D.E. and A.E. DePristo, “Predicted diffusion rates on fcc(001) metal surfaces for adsorbate/substrate combinations of Ni Cu, Rh, Pd, Ag, Pt, Au,” Surf. Sci., 260, 116 (1992).

    Google Scholar 

  • Sevick, E.M., A.T. Bell, and D.B. Theodorou, “Chain of states method for investigating infrequent event processes occurring in multistate, multidimensional systems,” J. Chem. Phys., 98, 3196 (1993).

    Google Scholar 

  • Sexton, B.A. and A.E. Hughes, “A comparison of weak molecular adsorption of organic molecules on clean copper and platinum surfaces,” Surf. Sci. 140, 227 (1984).

    Google Scholar 

  • Stranick, S.J., M.M. Kamna, and P.S. Weiss, “Atornic-scale dynamics of a two-dimensional gas-solid interface,” Science, 266, 99 (1994).

    Google Scholar 

  • van der Ploeg, P. and H.J.C. Berendsen, “Molecular dynamics of a bilayer membrane,” Mol. Phys., 85, 1613 (1986).

    Google Scholar 

  • Wang, J.-C. and K.A. Fichthorn, “Diffusion mechanisms of physically adsorbed dithers on fcc(100) surfaces,” to appear in Langmuir.

  • Wang, R. and K.A. Fichthorn, “Diffusion mechanisms of dithers adsorbed on periodic substrates,” Phys. Rev., B48, 18288 (1993).

    Google Scholar 

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Fichthorn, K.A. Diffusion of short-chain molecules on metal surfaces. Adsorption 2, 77–87 (1996). https://doi.org/10.1007/BF00127101

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