Skip to main content
Log in

Rhizobium tropici nodulates field-grown Phaseolus vulgaris in France

  • Research Article
  • Published:
Plant and Soil Aims and scope Submit manuscript

Abstract

Two hundred and eighty seven isolates of Rhizobium nodulating Phaseolus vulgaris L. were sampled in France from four geographically distant field populations. They were characterized by their colony morphology and by plasmid profiles. A representative sample was further characterized: a) by the ability of each isolate to nodulate a potential alternative host Leucaena leucocephala and to grow on specific media, and b) by RFLP analysis of PCR amplified 16S rRNA genes. On the basis of their phenotypic and genetic characteristics the isolates could be assigned either to Rhizobium leguminosarum bv phaseoli, or to R. tropici. The two species co-occurred at three sites. R. leguminosarum bv phaseoli represented 2%, 4%, 72% and 100% of the population at the four different sites. Eighteen and 22 different plasmid profiles were identified within R. tropici and R. leguminosarum bv phaseoli, respectively. Some of them were conserved between distant geographical regions. The fact that R. tropici was found in France shows that this species is not limited to tropical regions and gives additional evidence of the multi-specific nature of the Phaseolus microsymbiont, even over a geographically limited area.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Amarger, N 1981 Selection of Rhizobium strains on their competitive ability for nodulation. Soil Biol. Biochem. 13, 481–486.

    Google Scholar 

  • Bergersen, F J 1961 The growth of Rhizobium in synthetic media. Aust. J. Biol. Sci. 14, 349–360.

    Google Scholar 

  • Beringer, J E 1974 R Factor transfer in Rhizobium leguminosarum. J. Gen. Microbiol. 84, 188–198.

    Google Scholar 

  • Brockman, F J and Bezdicek, D F 1989 Diversity within serogroups of Rhizobium leguminosarum biovar viciae in the palouse region of Eastern Washington as indicated by plasmid profiles, intrinsic antibiotic resistance, and topography. Appl. Environ. Microbiol. 55, 109–115.

    Google Scholar 

  • Bromfield, E S P and Barran, L R 1990 Promiscuous nodulation of Phaseolus vulgaris, Macroptilium atropurpureum, and Leucaena leucocephala by indigenous Rhizobium meliloti. Can. J. Microbiol. 36, 369–372.

    Google Scholar 

  • Eardly, B D, Hannaway, D B and Bottomley, P J 1985 Characterization of rhizobia from ineffective alfafa nodules: ability to nodulate bean plants Phaseolus vulgaris (L.) Savi.. Appl. Environ. Microbiol. 50, 1422–1427.

    Google Scholar 

  • Eardly, B D, Young, J P W and Selander, R K 1992 Phylogenetic position of Rhizobium sp. strain Or 191, a symbiont of both Medicago sativa and Phaseolus vulgaris, based on partial sequences of the 16S rRNA and niff H genes. Appl. Environ. Microbiol. 58, 1809–1815.

    Google Scholar 

  • Eckhardt, T 1978 A rapid method for the identification of plasmid desoxyribonucleic acid in bacteria. Plasmid 1, 584–588.

    Google Scholar 

  • Geniaux, E, Laguerre, G and Amarger, N 1993 Comparison of geographically distant populations of Rhizobium isolated from root nodules of Phaseolus vulgaris. Mol. Ecol. 2, 295–302.

    Google Scholar 

  • Gepts, P and Bliss, F A 1988 Dissemination pathways of common bean (Phaseolus vulgaris) deduced from phaseolin electrophoretic variability. 2. Europe and Africa. Econ. Bot. 42, 86–104.

    Google Scholar 

  • Gibson, A H 1963 Physical environment and symbiotic nitrogen fixation. I. The effect of root temperature on recently nodulated Trifolium subterraneum L. plants. Aust. J. Biol. Sci. 16, 28–42.

    Google Scholar 

  • Graham, P H 1981 Some problems of nodulation and symbiotic nitrogen fixation in Phaseolus vulgaris L.: a review. Field Crops Res. 4, 93–112.

    Google Scholar 

  • Graham, P H and Parker, C A 1964 Diagnostic features in the characterization of the root-nodule bacteria of legumes. Plant and Soil 20, 383–386.

    Google Scholar 

  • Jordan, D C 1984 Family III. Rhizobiaceae. In Bergey's manual of systematic bacteriology. Ed. N R Krieg and J G Holt. Vol 1., pp 234–242. The Williams and Wilkins Co., Baltimore.

    Google Scholar 

  • Laguerre, G, Mazurier, S I and Amarger, N 1992 Plasmid profiles and restriction fragment length polymorphism of Rhizobium leguminosarum bv. viciae in field populations. FEMS Microbiol. Ecol. 107, 17–26.

    Google Scholar 

  • Laguerre, G, Fernandez, M P, Edel, V, Normand, P and Amarger, N 1993a Genomic heterogeneity among French Rhizobium strains isolated from Phaseolus vulgaris. Int. J. Syst. Bacteriol. 43, 761–767.

    Google Scholar 

  • Laguerre, G, Geniaux, E, Mazurier, S I, Rodriguez Casartelli, R and Amarger, N 1993b Conformity and diversity among field isolates of Rhizobium leguminosarum bv. viciae, bv. trifolii and bv. phaseoli revealed by DNA hybridization using chromosome and plasmid probes. Can. J. Microbiol. 39, 412–419.

    Google Scholar 

  • Laguerre, G, Allard, M R, Revoy, F and Amarger, N 1994 Rapid identification of rhizobia by Restriction Fragment Length Polymorphism analysis of PCR-amplified 16S rRNA genes. Appl. Environ. Microbiol. 60, 56–63.

    Google Scholar 

  • Martinez-Romero, E, Segovia, L, Mercante, F M, Franco, A A, Graham, P and Pardo, M A 1991 Rhizobium tropici, a novel species nodulating Phaseolus vulgaris L beans and Leucaena sp trees. Int. J. Syst. Bacteriol. 41, 417–426.

    Google Scholar 

  • Miller, J H 1972 Experiments in Molecular Genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, USA.

    Google Scholar 

  • Mozo, T, Cabrera, E and Ruiz-Argüeso, T 1988 Diversity of plasmid profile and conservation of symbiotic nitrogen fixation genes in newly isolated Rhizobium strains nodulating Sulla (Hedysarum coronarium, L.). Appl. Environ. Microbiol. 54, 1262–1267.

    Google Scholar 

  • Pinero, D, Martinez, E and Selander, R K 1988 Genetic diversity and relationships among isolates of Rhizobium leguminosarum biovar phaseoli. Appl. Environ. Microbiol. 54, 2825–2832.

    Google Scholar 

  • Sadowsky, M J, Cregan, P B and Keyser, H H 1988 Nodulation and nitrogen fixation efficacy of Rhizobium fredii with Phaseolus vulgaris genotypes. Appl. Environ. Microbiol. 54, 1907–1910.

    Google Scholar 

  • Segovia, L, Young, J P W and Martinez-Romero, E 1993 Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov. Int. J. Syst. Bacteriol. 43, 374–377.

    Google Scholar 

  • Vincent, J M 1970 A manual for the practical study of root-nodule bacteria. IBP handbook no. 15. Blackwell Scientific Publications Ltd, Oxford, UK. 164 p.

    Google Scholar 

  • Vincent, J M 1974 Root nodule symbioses with Rhizobium. In The Biology of Nitrogen Fixation. Ed. A. Quispel. pp 266–341. North Holland Publishers, Amsterdam

    Google Scholar 

  • Weisburg, W G, Barns, S M, Pelletier, D A and Lane, D J 1991 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173, 697–703.

    Google Scholar 

  • Wheatcroft, R, McRae, D G and Miller, R W 1990 Changes in the Rhizobium meliloti genome and the ability to detect supercoiled plasmids during bacteroid development. Mol Plant-Microb Interact. 3, 9–17.

    Google Scholar 

  • Willems, A and Collins, D 1993 Phylogenetic analysis of rhizobia and agrobacteria based on 16S rRNA gene sequence. Int. J. Syst. Bacteriol. 43, 305–313.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Amarger, N., Bours, M., Revoy, F. et al. Rhizobium tropici nodulates field-grown Phaseolus vulgaris in France. Plant Soil 161, 147–156 (1994). https://doi.org/10.1007/BF00046386

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00046386

Key words

Navigation