Skip to main content
Log in

Identification and isoprenylation of plant GTP-binding proteins

  • Mini-review
  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

To identify isoprenylated plant GTP-binding proteins,Arabidopsis thaliana andNicotiana tabacum cDNA expression libraries were screened for cDNA-encoded proteins capable of binding [32P]GTPin vitro. ATGB2, anArabidopsis homologue of the GTP-binding protein Rab2, was found to bind GTPin vitro and to be a substrate for a geranylgeranyl:protein transferase (GGTase) present in plant extracts. The carboxyl terminus of this protein contains a-GCCG sequence, which has not previously been shown to be recognized by any prenyl:protein transferase (PTase), but which most closely resembles that isoprenylated by the type II GGTase (-XXCC,-XCXC, or-CCXX).In vitro geranylgeranylation of anArabidopsis Rab1 protein containing a carboxyl-terminal-CCGQ sequence contirmed the presence of a type II GGTase-like activity in plant extracts. Several other proteins were also identified byin vitro GTP binding, includingArabidopsis and tobacco homologues of Rab11, ARF (ADP-ribosylation factor) and Sar proteins, as well as a novel 22 kDaArabidopsis protein (ATG81). This 22 kDa protein had consensus GTP-binding motifs and bound GTP with high specificity, but its structure was not closely related to that of any known GTP-binding protein (it most resembled proteins within the ARF/Sar and G protein α-subunit superfamilies).

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 215: 403–410 (1990).

    Article  PubMed  Google Scholar 

  2. Barlowe C, Schekman R:SEC12 encodes a guanine-nucleotide-exchange factor essential for transport vesicle budding from the ER. Nature 365: 347–349 (1993).

    Article  PubMed  Google Scholar 

  3. Biermann BJ, Morehead TA, Tate SE, Price JR, Randall SK, Crowell DN: Novel isoprenylated proteins identified by an expression library screen. J Biol Chem 269: 25251–25254 (1994).

    PubMed  Google Scholar 

  4. Bourne HR, Sanders DA, McCormick F: The GTPase superfamily: conserved structure and molecular mechanism. Nature 349: 117–127 (1991).

    Article  PubMed  Google Scholar 

  5. Caplin BE, Marshall MS: Mutagenesis and biochemical analysis of recombinant yeast prenyltransferases. Meth Enzymol 250: 51–68 (1995).

    PubMed  Google Scholar 

  6. Clarke S: Protein isoprenylation and methylation at carboxyl-terminal cysteine residues. Annu Rev Biochem 61: 355–386 (1992).

    PubMed  Google Scholar 

  7. Gordon JI, Duronio RJ, Rudnick DA, Adams SP, Gokel GW: ProteinN-myristoylation. J Biol Chem 266: 8647–8650 (1991).

    PubMed  Google Scholar 

  8. Horiuchi H, Kawata M, Katayama M, Yoshida Y, Musha T, Ando S, Takai Y: A novel prenyltransferase for a small GTP-binding protein having a C-terminal Cys-Ala-Cys structure. J Biol Chem 266: 16981–16984 (1991).

    PubMed  Google Scholar 

  9. Khosravi-Far R, Lutz RJ, Cox AD, Conroy L, Bourne JR, Sinensky M, Balch WE, Buss JE, Der CJ: Isoprenoid modification of rab proteins terminating in CC or CXC motifs. Proc Natl Acad Sci USA 88: 6264–6268 (1991).

    PubMed  Google Scholar 

  10. Kinsella BT, Maltese WA:rab GTP-binding proteins with three different carboxyl-terminal cysteine motifs are modifiedin vivo by 20-carbon isoprenoids. J Biol Chem 267: 3940–3945 (1992).

    PubMed  Google Scholar 

  11. Laemmli UK: Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680–685 (1970).

    PubMed  Google Scholar 

  12. Matsui M, Sasamoto S, Kunieda T, Nomura N, Ishizaki R: Cloning ofara, a putativeArabidopsis thaliana gene homologous to theras-related gene family. Gene 76: 313–319 (1989).

    Article  PubMed  Google Scholar 

  13. Moores SL, Schaber MD, Mosser SD, Rands E, O'Hara MB, Garsky VM, Marshall MS, Pompliano DL, Gibbs JB: Sequence dependence of protein isoprenylation. J Biol Chem 266: 14603–14610 (1991).

    PubMed  Google Scholar 

  14. Newman T, de Bruijn FJ, Green P, Keegstra K, Kende H, McIntosh L, Ohlrogge J, Raikhel N, Somerville S, Thomashow M, Retzel E, Somerville C: Genes galore: a summary of methods for accessing results from large-scale partial sequencing of anonymousArabidopsis cDNA clones. Plant Physiol 106: 1241–1255 (1994).

    Article  PubMed  Google Scholar 

  15. Randall SK, Marshall MS, Crowell DN: Protein isoprenylation in suspension-cultured tobacco cells. Plant Cell 5: 433–442 (1993).

    Article  PubMed  Google Scholar 

  16. Seabra MC, Goldstein JL, Südhof TC, Brown MS: Rab geranylgeranyl transferase: a multisubunit enzyme that prenylases GTP-binding proteins terminating in Cys-X-Cys or Cys-Cys. J Biol Chem 267: 14497–14503 (1992).

    PubMed  Google Scholar 

  17. Terryn N, Van Montagu M, Inzé D: GTP-binding proteins in plants. Plant Mol Biol 22: 143–152 (1993).

    PubMed  Google Scholar 

  18. Valencia A, Chardin P, Wittinghofer A, Sander C: Theras protein family: evolutionary treen and role of conserved amino acids. Biochemistry 30: 4637–4648 (1991).

    PubMed  Google Scholar 

  19. Verma DPS, Cheon C-I, Hong Z: Small GTP-binding proteins and membrane biogenesis in plants. Plant Physiol 106: 1–6 (1994).

    PubMed  Google Scholar 

  20. Yang Z, Watson JC: Molecular cloning and characterization of rho, a ras-related small GTP-binding protein from the garden pea. Proc Natl Acad Sci USA 90: 8732–8736 (1993).

    PubMed  Google Scholar 

  21. Zhu J-K, Bressan RA, Hasegawa PM: Isoprenylation of the plant molecular chaperone ANJI facilitates membrane association and function at high temperature. Proc Natl Acad Sci USA 90: 8557–8561 (1993).

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Biermann, B., Randall, S.K. & Crowell, D.N. Identification and isoprenylation of plant GTP-binding proteins. Plant Mol Biol 31, 1021–1028 (1996). https://doi.org/10.1007/BF00040720

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00040720

Key words

Navigation