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Isolation and characterization of a genomic sequence encoding the maizeCat3 catalase gene

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Abstract

A maize genomic DNA library (Zea mays L. W64A) was constructed using the lambda GEM-11 vector. A gene-specificCat3 cDNA probe was used to screen the library by plaque hybridization. Two independent clones, λ24C and gl27C, which hybridized to theCat3 cDNA probe, were isolated. Restriction maps were created for the two clones (λ24C and λ27C) encoding the maizeCat3 catalase gene. ASal I restriction fragment from each clone was subcloned into pBluescript KS+. Subsequent subcloning steps were performed to obtain plasmids suitable for sequencing. Both strands of the λ24C clone were sequenced.

Computer analysis of the putativeCat3 promoter region has not revealed any known transcription factor binding motifs. Analysis of the deduced C-terminal amino acids encoded byCat3 shows that CAT-3 lacks the SRL peroxisomal targeting sequence contained in the CAT-1 and CAT-2 isozymes. The DNA sequence and physical structure of theCat3 gene presented here will be used in characterizingcis- andtrans-acting factors affectingCat3 gene expression.

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References

  1. Acevedo A, Scandalios JG: Expression of the catalase and superoxide dismutase genes in mature pollen of maize. Theor Appl Gen 80: 705–711 (1990).

    Google Scholar 

  2. Acevedo A, Williamson JD, Scandalios JG: Photoregulation of theCat2 andCat3 catalase genes in pigmented and pigment-deficient maize: The circadian regulation ofCat3 is superimposed on its quasi-constitutive expression in maize leaves. Genetics 127: 601–607 (1991).

    Google Scholar 

  3. Bethards LA, Skadsen RW, Scandalios JG: Isolation and characterization of a cDNA clone for theCat2 gene in maize and its homology with other catalases. Proc Natl Acad Sci USA 84: 6830–6834 (1987).

    Google Scholar 

  4. Breyne P, Van Montagu M, Depicker A, Gheysen G: Characterization of a plant scaffold attachment region in a DNA fragment that normalizes transgene expression in tobacco. Plant Cell 4: 463–471 (1992).

    Google Scholar 

  5. Chandlee JM, Tsaftaris AS, Scandalios JS: Purification and partial characterization of three genetically defined catalases of maize. Plant Sci Lett 29: 117–131 (1983).

    Google Scholar 

  6. Chen EY, Seeburg PH: Supercoil sequencing: A fast and simple method for sequencing plasmid DNA. DNA 4: 164–170 (1985).

    Google Scholar 

  7. Feinberg AP, Vogelstein B: A technique for radiolabeling DNA restriction enzyme fragments to high specific activity. Anal Biochem 132: 6–13 (1983).

    Google Scholar 

  8. Guan L, Scandalios JG: Characterization of the catalase antioxidant defense geneCatl of maize, and its developmentally regulated expression in transgenic tobacco. Plant J 3: 527–536 (1993).

    Google Scholar 

  9. Guiltinan MJ, Marcotte WR, Quatrano RS: A plant leucine zipper protein that recognizes an abscisic acid response element. Science 250: 267–271 (1990).

    Google Scholar 

  10. Havir EA, McHale NA: Enhanced peroxidatic activity in specific catalase isozymes of tobacco, barley and maize. Plant Physiol 91: 812–815 (1989).

    Google Scholar 

  11. Henikoff S: Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene 28: 351–359 (1984).

    Google Scholar 

  12. Ikemura T: Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol 2: 13–34 (1985).

    Google Scholar 

  13. Luan S, Bogorad L: A ricecab gene promoter contains separatecis-acting elements that regulate expression in dicot and monocot plants. Plant Cell 4: 971–981 (1992).

    Google Scholar 

  14. Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1982).

    Google Scholar 

  15. Mielke C, Kohwi Y, Kohwi-Shigematsu T, Bode J: Hierarchical binding of DNA fragments derived from scaffold-attached regions: Correlation of propertiesin vitro and functionin vivo. Biochemistry 29: 7475–7485 (1990).

    Google Scholar 

  16. Redinbaugh MG, Sabre M, Scandalios JG: The distribution of catalase activity, isozyme protein and transcript in the tissues of the developing maize seedling. Plant Physiol 92: 375–380 (1990).

    Google Scholar 

  17. Redinbaugh MG, Sabre M, Scandalios JG: Expression of the maizeCat3 catalase gene is under the influence of a circadian rhythm. Proc Natl Acad Sci USA 87: 6853–6857 (1990).

    Google Scholar 

  18. Redinbaugh MG, Wadsworth GJ, Scandalios JG: Characterization of catalase transcripts and their differential expression in maize. Biochim Biophys Acta 951: 104–116 (1988).

    Google Scholar 

  19. Rushmore TH, Morton MR, Pickett CB: The antioxidant responsive element: Activation by oxidative stress and identification of the DNA consensus sequence required for functional activity. J Biol Chem 266: 11632–11639 (1991).

    Google Scholar 

  20. Sanger F, Nicklen S, Coulson AR: DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467 (1977).

    Google Scholar 

  21. Scandalios JG: Targeting, import, and processing of nuclear gene-encoded proteins into mitochondria and peroxisomes. In: Ogita Z, Markert CL (eds) Isozymes: Structure, Function and Use in Biology and Medicine, pp. 514–544. Wiley/Liss, New York (1990).

    Google Scholar 

  22. Scandalios JG: Regulation of the antioxidant defense genesCat andSod of maize. In: Scandalios JG (ed) Molecular Biology of Free Radical Scavenging Systems, pp. 117–152. Cold Spring Harbor Laboratory Press, Plainview, NY (1992).

    Google Scholar 

  23. Scandalios JG, Tong WF, Roupakias DG:Cat3, a third gene locus coding for a tissue-specific catalase in maize: Genetics, intracellular location and some biochemical properties. Mol Gen Genet 179: 33–41 (1980).

    Google Scholar 

  24. Slatter RE, Dupree P, Gray JC: A scaffold-associated DNA region is located downstream of the pea plastocyanin gene. Plant Cell 3: 1239–1250 (1991).

    Google Scholar 

  25. Tsaftaris AS, Bosabalidis AM, Scandalios JG: Cell-typespecific gene expression and acatalasemic peroxisomes in a nullCat2 catalase mutant of maize. Proc Natl Acad Sci USA 80: 4455–4459 (1983).

    Google Scholar 

  26. Wadsworth GJ: Molecular biology of the catalase geneenzyme system of maize: Gene structure and expression. Ph.D. thesis, North Carolina State University (1989).

  27. Wadsworth GJ, Scandalios JG: Differential expression of the maize catalase genes during kernel development: The role of steady-state mRNA levels. Devel Genet 10: 304–310 (1989).

    Google Scholar 

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Abler, M.L., Scandalios, J.G. Isolation and characterization of a genomic sequence encoding the maizeCat3 catalase gene. Plant Mol Biol 22, 1031–1038 (1993). https://doi.org/10.1007/BF00028975

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