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Replication of the rRNA and legumin genes in synchronized root cells of pea (Pisum sativum): evidence for transient EcoR I sites in replicating rRNA genes

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Summary

The temporal pattern of replication of the rRNA and legumin genes differs in synchronized pea root cells. The relative number of rRNA genes replicated hourly during the first five hours of S phase ranges between 5 and 10 percent. In late S phase, during hours six through nine, the number of rRNA genes replicated increases reaching a maximum of about 25 percent at the ninth hour. Unlike the rRNA genes, the legumin genes have a wave-like pattern of replication peaking in early S phase at the third hour and again in late S phase at the eighth hour.

Replicating rDNA, isolated by benzoylated naphthoylated DEAE-column chromatography, has EcoR I restriction sites that are absent in non-replicating rDNA sequences. The cleavage of these sites is independent of the time of rDNA replication. The transient nature of the EcoR I sites suggests that they exist in a hemimethylated state in parental DNA.

The two Hind III repeat-size classes of rDNA of var. Alaska peas are replicated simultaneously as cells progress through S phase. Thus, even if the 9.0 kb and 8.6 kb repeat classes are located on different chromosomes, their temporal order of replication is the same.

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References

  1. Bown D, Lavasseur M, Croy RRD, Boulter D, Gatehouse JA: Sequence of a pseudogene in the legumin gene family of pea (Pisum sativum L.). Nuc Acid Res 13: 4527–4538, 1985.

    Google Scholar 

  2. Brennan CA, VanCleve MD, Gumport RI: The effects of base analogue substitutions on the cleavage by the EcoR I restriction endonuclease of octadeoxyribonucleotides containing modified EcoR I recognition sequences. J Bio Chem 261: 7270–7278, 1986.

    Google Scholar 

  3. Burr B, Burr F: Controlling-element events at the shrunken locus in maize. Genetics 98: 143–156, 1981.

    Google Scholar 

  4. Calza RE, Eckhardt LA, DelGiudice T, Schildkraut CL: Changes in gene position are accompanied by a change in time of replication. Cell 36: 689–696, 1984.

    Google Scholar 

  5. Chomczynski P, Qasba PK: Alkaline transfer of DNA to plastic membrane. Biochim Biophys Res Comm 122: 340–344, 1984.

    Google Scholar 

  6. Croy RRD, Lycett GW, Gatehouse JA, Yarwood JN, Boulder D: Cloning and analysis of cDNAs encoding plant storage protein precursors. Nature 295: 76–79, 1982.

    Google Scholar 

  7. Cuellar RE: Ph D thesis, Stanford University, Palo Alto, California, 1982.

  8. Cullis CA, Davies RD: Ribosomal DNA amounts in Pisum sativum. Genetics 81: 485–492, 1975.

    Google Scholar 

  9. Domoney C, Casey R: Measurement of gene number for seed storage proteins in Pisum. Nuc Acid Res 13: 687–699, 1985.

    Google Scholar 

  10. Doerfler W: DNA methylation and gene activity. Ann Rev Biochem 52: 93–124, 1983.

    Google Scholar 

  11. Ellis THN, Davies DR, Castleton JA, Bedford ID: The organization and genetics of rDNA length variants in peas. Chromosoma 91: 74–81, 1984.

    Google Scholar 

  12. Gamper H, Lehman N, Piette J, Hearst JE: Purification of circular DNA using benzoylated naphthoylated DEAE-cellulose. DNA 4: 157–164, 1985.

    Google Scholar 

  13. Gatti RA, Concannon R, Salser W: Multiple use of Southern blots. Bio Techniques 2: 148–155, 1984.

    Google Scholar 

  14. Giacomoni D, Finkel D. Time of duplication of ribosomal RNA cistrons in a cell line of Potorous tridactylis (Rat Kangaroo). J Mol Biol 70: 725–728, 1972.

    Google Scholar 

  15. Goldman MA, Holmquist GP, Gray MC, Caston LA, Nag A: Replication timing of genes and middle repetitive sequences. Science 224: 686–692, 1984.

    Google Scholar 

  16. Gruenbaum Y, Naveh-Many T, Cedar H, Razin A: Sequence specificity of methylation in higher plant DNA. Nature 292: 860–862, 1981.

    Google Scholar 

  17. Gruenbaum Y, Szyf M, Cedar H, Razin A: Methylation of replicating and post-replicated mouse L-cell DNA. Proc Natl Acad Sci (USA) 80: 4919–4921, 1983.

    Google Scholar 

  18. Ingle J, Sinclair J. Ribosomal RNA genes and plant development. Nature 235: 30–32, 1972.

    Google Scholar 

  19. Jorgensen RA, Cuellar RE, Thompson WF: Modes and tempos in the evolution of nuclear encoded ribosomal pea genes in legumes. Carnegie Inst of Washington Yearbook, 1982, pp 98–101.

  20. Kessler C, Neumaier PS, Wolf W: Recognition sequences of restriction endonucleases and methylases—a review. Gene 33: 1–102, 1985.

    Google Scholar 

  21. Kovacs CJ, Van'tHof J: Synchronization of a proliferative population in a cultured plant tissue. J Cell Biol 47: 536–539, 1970.

    Google Scholar 

  22. Maniatis T, Fritsch EF, Sambrook J: Molecular cloning, a laboratory manual. Cold Spring Harbor Laboratory, 1982.

  23. Meinkoth J, Wahl G. Hybridization of nucleic acids immobilized on solid supports. Anal Biochem 138: 267–284, 1984.

    Google Scholar 

  24. Newlon CS, Sonenshein GE, Holt CE: Time of synthesis of genes for ribosomal ribonucleic acid in Physarum. Biochem 12: 2338–2345, 1973.

    Google Scholar 

  25. Pierron G, Durica DS, Sauer HW: Invariant temporal order of replication of the four actin gene loci during the naturally synchronous mitotic cycles of Physarum polycephalum. Proc Natl Acad Sci (USA). 81: 6393–6397, 1984.

    Google Scholar 

  26. Reed KC, Mann DA: Rapid transfer of DNA from agarose gels to nylon membranes. Nuc Acid Res 20: 7207–7221, 1985.

    Google Scholar 

  27. Rhode SL: Replication process of the parvovirus H-1 VI. Characterization of a replication terminus of H-1 replicative-form DNA. J Virology 21: 694–712, 1977.

    Google Scholar 

  28. Schvartzman JB, Chenet B, Bjerknes CA, Van'tHof J: Nascent replicons are synchronously joined at the end of S phase or during G2 phase in peas. Biochim et Biophys Acta 653: 185–192, 1981.

    Google Scholar 

  29. Scott NS, Kavanagh TA, Timmis JN: Methylation of rRNA genes in some higher plants. Plant Sci News Let 35: 213–217, 1984.

    Google Scholar 

  30. Spotila LD, Huberman JA: Method for mapping DNA replication origins. Mol Cell Biol 5: 85–92, 1985.

    Google Scholar 

  31. Taylor JH. Enzymatic methylation of DNA: Patterns and possible regulatory role. In: Taylor JH (ed) Molecular genetics, part III. Academic Press, New York, 1979, pp 89–115.

    Google Scholar 

  32. Van'tHof J: Pea (Pisum sativum) cells arrested in G2 have nascent DNA with breaks between replicons and replication clusters. Exptl Cell Res 129: 231–237, 1980.

    Google Scholar 

  33. Van'tHof J, Bjerknes CA: 18 um replication units of chromosomal DNA fibers of differentiated cells of pea (Pisum sativum). Chromosoma 64: 287–294, 1977.

    Google Scholar 

  34. Van'tHof J, Bjerknes CA: Similar replicon properties of higher plant cells with different S periods and genome sizes. Exptl Cell Res 136: 461–465, 1981.

    Google Scholar 

  35. Van'tHof J, Kovacs CJ: Mitotic cycle regulation in the meristem of cultured roots: the principal control point hypothesis. In: Miller MW, Kuehnert CC (eds) The dynamics of meristem cell populations. Plenum Press, New York, 1972, pp 15–32.

    Google Scholar 

  36. VonKalm L, Vize PD, Smyth DR: An under-methylated region in the spacer of ribosomal RNA genes of Lilium henryi. Plant Mol Biol 6: 33–39, 1986.

    Google Scholar 

  37. Zellweger A, Ryser U, Braun R: Ribosomal genes of Physgrum: Their isolation and replication in the mitotic cycle. J Mol Biol 64: 681–691, 1972.

    Google Scholar 

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Hof, J.V., Hernandez, P., Bjerknes, C.A. et al. Replication of the rRNA and legumin genes in synchronized root cells of pea (Pisum sativum): evidence for transient EcoR I sites in replicating rRNA genes. Plant Mol Biol 8, 133–143 (1987). https://doi.org/10.1007/BF00025324

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  • DOI: https://doi.org/10.1007/BF00025324

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