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TGA3 is a distinct member of the TGA family of bZIP transcription factors in Arabidopsis thaliana

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Abstract

TGA 1a is a well-characterized transcription factor that may mediate the root-specific and auxin-responsive expression of some plant genes. In tobacco, Southern blot and genomic cloning analyses have shown that TGA 1a consists of at least four closely related genes. Since TGA 1a belongs to the bZIP class of transcription factors, the protein products of the tobacco TGA 1a family are likely to form hetero-dimers with each other in addition to the homo-dimers. In order to find a model plant system that may have less genomic complexity, we have now characterized a TGA 1a-related gene (TGA3) from Arabidopsis thaliana. Southern blot analyses at high stringency suggest that Arabidopsis contains only one copy of TGA3 per haploid genome. However, low stringency Southern blot analyses with homologous and heterologous probes suggest that there is a multigene family of TGA1a-related genes present in Arabidopsis, of which TGA1, TGA2 and TGA3 are members. Although these gene members share a highly conserved bZIP region, they are not genes with high homologies at the nucleotide level. Similar to TGA1a of tobacco, TGA3 is most highly expressed in root tissues and recombinant TGA3 protein shows similar DNA-binding site specificity to that of TGA1a in vitro. Comparison of the genomic organization between TGA3 and the tobacco homologue PG13 reveals striking conservation in the sizes and positions of exons and introns in the region surrounding the bZIP domain.

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References

  1. Benfey PN, Chua N-H: The cauliflower mosaic virus 35S promoter: combinatorial regulation of transcription in plants. Science 250: 1104–1110 (1990).

    PubMed  Google Scholar 

  2. Bouchez D, Tokuhisa JG, Llewellyn DJ, Dennis ES, Ellis JG: The ocs-element is a component of the promoters of several T-DNA and plant viral genes. EMBO J 8: 4197–4204 (1989).

    PubMed  Google Scholar 

  3. Ebert PR, Ha SB, An G: Identification of an essential upstream element in the nopaline synthase promoter by stable and transient assays. Proc Natl Acad Sci USA 84: 5745–5749 (1987).

    Google Scholar 

  4. Ellis JG, Llewellyn DJ, Walker JC, Dennis ES, Peacock WJ: The ocs element: a 16 base pair palindrome essential for activity of the octopine synthase enhancer. EMBO J 6: 3203–3208 (1987).

    Google Scholar 

  5. Fromm H, Katagiri F, Chua N-H: An octopine synthase enhancer element directs tissue-specific expression and binds ASF-1, a factor from tobacco nuclear extracts. Plant Cell 1: 977–984 (1989).

    Article  PubMed  Google Scholar 

  6. Fromm H, Katagiri F, Chua N-H: The tobacco transcription factor TGA1a binds to a sequence in the 5′ upstream region of a gene encoding a TGA1a-related protein. Mol Gen Genet 229: 181–188 (1991).

    Article  PubMed  Google Scholar 

  7. Gray JC, Kung SD, Wildman SG, Sheen SJ: Origin of Nicotiana tabacum L. detected by polypeptide composition of Fraction 1 protein. Nature 252: 226–227 (1974).

    PubMed  Google Scholar 

  8. Katagiri F, Lam E, Chua N-H: Two tobacco DNA binding proteins with homology to the nuclear factor CREB. Nature 340: 727–730 (1989).

    Article  PubMed  Google Scholar 

  9. Katagiri F, Seipel K, Chua N-H: Identification of a novel dimer stabilization region in a plant bZIP transcription activator. Mol Cell Biol 12: 4809–4816 (1992).

    PubMed  Google Scholar 

  10. Katagiri F, Yamazaki K-I, Horikoshi M, Roeder RG, Chua N-H: A plant DNA-binding protein increases the number of active preinitiation complexes in a human in vitro transcription system. Genes Devel 4: 1899–1909 (1990).

    PubMed  Google Scholar 

  11. Kawata T, Imada T, Shiraishi H, Okada K, Shimura Y, Iwabuchi M: A cDNA clone encoding HPB-1b homologue in Arabidopsis thaliana. Nucl Acids Res 20: 1141 (1992).

    PubMed  Google Scholar 

  12. Lam E, Benfey PN, Gilmartin PM, Fang R-X, Chua N-H: Site-specific mutations alter in vitro factor binding and change promoter expression pattern in transgenic plants. Proc Natl Acad Sci USA 86: 7890–7894 (1989).

    PubMed  Google Scholar 

  13. Lam E, Katagiri F, Chua N-H: Plant nuclear factor ASF-1 binds to an essential region of the nopaline synthase promoter. J Biol Chem 265: 9909–9913 (1990).

    PubMed  Google Scholar 

  14. Liu X-J, Lam E: Two binding sites for the plant transcription factor ASF-1 are auxin-responsive element. J Biol Chem 269: 668–675 (1994).

    PubMed  Google Scholar 

  15. Manzara T, Carrosco P, Gruissem W: Developmental and organ-specific changes in promoter DNA-protein interactions in the tomato rbc S gene family. Plant Cell 3: 1305–1316 (1991).

    Article  PubMed  Google Scholar 

  16. Meyerowitz EM: Arabidopsis thaliana. Annu Rev Genet 21: 93–111 (1987).

    Article  PubMed  Google Scholar 

  17. Miao Z-H, Gaynor JJ: Molecular cloning, characterization and expression of Mn-superoxide dismutase from the rubber tree (Hevea brasiliensis). Plant Mol Biol 23: 267–277 (1993).

    PubMed  Google Scholar 

  18. Mikami K, Sakamoto A, Takase H, Tabata T, Iwabuchi M: Wheat nuclear protein HBP-1b binds to the hexameric sequence in the promoter of various plant genes. Nucl Acids Res 17: 9707–9717 (1989).

    PubMed  Google Scholar 

  19. Nagy F, Boutry M, Hsu M-Y, Wong M, Chua N-H: The 5′-proximal region of the wheat cab-I gene contains a 268-bp enhancer-like sequence for phytochrome response. EMBO J 6: 2537–2542 (1987).

    PubMed  Google Scholar 

  20. Perisic O, Lam E: A tobacco DNA binding protein that interacts with a light-responsive box II element. Plant Cell 4: 831–838 (1992).

    Article  PubMed  Google Scholar 

  21. Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Press, Cold Spring Harbor, NY (1989).

    Google Scholar 

  22. Schindler U, Beckmann H, Cashmore AR: TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG. Plant Cell 4: 1309–1319 (1992).

    Article  PubMed  Google Scholar 

  23. Shure M, Wessler S, Fedoroff N: Molecular identification and isolation of the Waxy locus in maize. Cell 35: 225–233 (1983).

    Article  PubMed  Google Scholar 

  24. Singh K, Tokuhisa JG, Dennis ES, Peacock WJ: Saturation mutagenesis for the octopine synthase enhancer: correlation of mutant phenotypes with binding of a nuclear protein factor. Proc Natl Acad Sci USA 86: 3733–3737 (1989).

    PubMed  Google Scholar 

  25. Studier RW, Rosenberg AH, Dunn JJ, Dubendorf JW: Use of T7 polymerase to direct expression of cloned genes. Meth Enzymol 185: 60–89 (1990).

    PubMed  Google Scholar 

  26. Tabata T, Nakayama T, Mikami K, Iwabuchi M: HBP-1a and HBP-1b: leucine zipper-type transcription factors of wheat. EMBO J 10: 1459–1467 (1991).

    PubMed  Google Scholar 

  27. Vinson CR, Sigler PB, McKnight SL: Scissors-grip model for DNA recognition by a family of zipper proteins. Science 246: 911–916 (1989).

    PubMed  Google Scholar 

  28. Yamazaki K-I, Katagiri F, Imaseki H, Chua N-H: TGA1a, a tobacco DNA-binding protein increases the rate of initiation in a plant in vitro transcription system. Proc Natl Acad Sci USA 87: 7035–7039 (1990).

    PubMed  Google Scholar 

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Miao, ZH., Liu, X. & Lam, E. TGA3 is a distinct member of the TGA family of bZIP transcription factors in Arabidopsis thaliana . Plant Mol Biol 25, 1–11 (1994). https://doi.org/10.1007/BF00024193

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