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Nucleotide sequence and expression of a ripening and water stress-related cDNA from tomato with homology to the MIP class of membrane channel proteins

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Abstract

The nucleotide sequence and derived amino acid sequence were determined for a full-length version of the tomato cDNA clone, pTOM75, the mRNA for which has previously been shown to accumulate in roots, ripening fruit and senescing leaves. Computer analysis of the predicted protein product, which we have named tomato ripening-associated membrane protein (TRAMP) indicates strong homology to known transmembrane channel proteins from other organisms. Northern analysis showed that this gene was induced by waterstress and that this induction was unaffected in an ABA-deficient genetic back-ground.

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References

  1. Davies KM, Grierson D: Identification of cDNA clones for tomato (Lycopersicon esculentum Mill.) mRNAs that accumulate during fruit ripening and leaf senescence in response to ethylene. Planta 279: 73–80 (1989).

    Google Scholar 

  2. Deikman J, Fischer RL: Interaction of a DNA binding factor with the 5′-flanking region of an ethyleneresponsive fruit ripening gene from tomato. EMBO J 7: 3315–3320 (1988).

    PubMed  Google Scholar 

  3. Ehring GR, Zampighi GA, Horwitz J, Bok D, Hall JE: Properties of channels reconstituted from the major intrinsic protein of lens fiber membranes. J Gen Physiol 96: 631–664 (1990).

    Article  PubMed  Google Scholar 

  4. Gorin MB, Yancey SB, Cline J, Revel J-P, Horwitz J: The major intrinsic protein (MIP) of the bovine lens fiber membrane: Characterisation and structure based on cDNA cloning. Cell 39: 45–59 (1984).

    Article  Google Scholar 

  5. Gray J, Picton S, Shabbeer J, Schuch W, Grierson D: Molecular biology of fruit ripening and its manipulation with antisense genes. Plant Mol Biol 19: 69–87 (1992).

    PubMed  Google Scholar 

  6. Grierson D, Hamilton AJ, Bouzayen M, Koeck M, Lycett GW, Barton S: Regulation of gene expression, ethylene synthesis and ripening in transgenic tomatoes. In: Wray JL (ed) Inducible Plant Proteins: Their Biochemistry and Molecular Biology, pp. 155–174. Cambridge University Press, Cambridge (1992).

    Google Scholar 

  7. Guerrero FD, Crossland L: Tissue-specific expression of a plant turgor-responsive gene with amino acid homology to transport-facilitating proteins. Plant Mol Biol 21: 929–935 (1993).

    PubMed  Google Scholar 

  8. Guerrero FD, Jones JT, Mullet JE: Turgor-responsive gene transcription and RNA levels increase rapidly when pea shoots are wilted. Sequence and expression of three inducible genes. Plant Mol Biol 15: 11–26 (1990).

    PubMed  Google Scholar 

  9. Hamilton AJ, Lycett GW, Grierson D: Antisense gene that inhibits synthesis of the hormone ethylene in transgenic plants. Nature 346: 284–287 (1990).

    Article  Google Scholar 

  10. Heller KB, Lin ECC, Wilson TH: Substrate specificity and transport properties of the glycerol facilitator of Escherichia coli. J Bact 144: 274–278 (1980).

    PubMed  Google Scholar 

  11. Johnson KD, Hoefte H, Chrispeels MJ: An intrinsic tonoplast protein of protein storage vacuoles in seeds is structurally related to a bacterial solute transporter (GlpF). Plant Cell 2: 525–532 (1990).

    Article  PubMed  Google Scholar 

  12. Lampe PD, Johnson RG: Amino acid sequence of in vivo phosphorylation sites in the main intrinsic protein (MIP) of lens membranes. Eur J Biochem 194: 541–547 (1990).

    PubMed  Google Scholar 

  13. Ludevid D, Hoefte H, Himmelblau E, Chrispeels MJ: The expression pattern of the tonoplast intrinsic protein gamma-TIP in Arabidopsis thaliana is correlated with cell enlargement. Plant Physiol 100: 1633–1639 (1992).

    Google Scholar 

  14. Luetke HA, Chow KC, Mickel FS, Moss KA, Kern HF, Scheele GA: Selection of AUG initiation codons differs in plants and animals. EMBO J 6: 43–48 (1987).

    PubMed  Google Scholar 

  15. Lycett GW, Delauney AJ, Croy RRD: Are plant genes different? FEBS Lett 153: 43–46 (1983).

    Article  Google Scholar 

  16. Maunders MJ, Holdsworth MJ, Slater A, Knapp JE, Bird CR, Schuch W, Grierson D: Ethylene stimulates the accumulation of ripening-related mRNAs in tomatoes. Plant Cell Environ 10: 177–184 (1987).

    Google Scholar 

  17. Miao GH, Hong Z, Verma DPS: Topology and phosphorylation of soybean nodulin-26, an intrinsic protein of the peribacteroid membrane. J Cell Biol 118: 481–490 (1992).

    Article  PubMed  Google Scholar 

  18. Muramatsu S, Mizuno T: Nucleotide sequence of the region encompassing the glpKF operon and its upstream region containing a bent DNA sequence of Escherichia coli. Nucl Acids Res 17: 4378 (1989).

    PubMed  Google Scholar 

  19. Parry AD, Neil SJ, Horgan R: Xanthoxin levels and metabolism in the wild type and wilty mutants of tomato. Planta 173: 397–404 (1988).

    Article  Google Scholar 

  20. Picton S, Gray J, Barton S, AbuBakar U, Lowe A, Grierson D: cDNA cloning and characterisation of novel ripening related mRNAs with altered patterns of accumulation in the ripening inhibitor (rin) tomato mutant. Plant Mol Biol 23: 193–207 (1993).

    PubMed  Google Scholar 

  21. Preston GM, Agre P: Isolation of the cDNA for erythrocyte integral membrane protein of 28 kilodaltons: Member of an ancient channel family: Proc Natl Acad Sci USA 88: 11110–11114 (1991).

    PubMed  Google Scholar 

  22. Preston GM, Carroll TP, Guggino WB, Agre P: Appearance of water channels in Xenopus oocytes expressing red cell CHIP28 protein. Science 256: 385–387 (1992).

    PubMed  Google Scholar 

  23. Rao Y, Jan LY, Jan YN: Similarity of the product of the Drosophila neurogenic gene big brain to transmembrane channel proteins. Nature 345: 163–167 (1990).

    PubMed  Google Scholar 

  24. Sandal NN, Marcker KA: Soybean nodulin 26 is homologous to the major intrinsic protein of the bovine lens fiber membrane. Nucl Acids Res 16: 9347 (1988).

    PubMed  Google Scholar 

  25. Slater A, Maunders MJ, Edwards K, Schuch W, Grierson D: Isolation and characterisation of cDNA clones for tomato polygalacturonase. Plant Mol Biol 5: 137–147 (1985).

    Google Scholar 

  26. Tucker GA, Grierson D: Fruit ripening. In: Davies D (ed) The Biochemistry of Plants, vol 12, pp. 265–318. Academic Press, New York (1987).

    Google Scholar 

  27. Weaver CD, Crombie B, Stacey G, Roberts DM: Calcium-dependent phosphorylation of symbiosome membrane proteins from nitrogen-fixing soybean nodules: evidence for phosphorylation of nodulin 26. Plant Physiol 95: 222–227 (1991).

    Google Scholar 

  28. Yamamoto YC, Taylor CG, Acedo GN, Cheng CL, Conkling MA: Characterisation of cis-acting sequences regulating root-specific gene expression in tobacco. Plant Cell 3: 371–382 (1991).

    PubMed  Google Scholar 

  29. Zampighi GA, Hall JE, Ehring GR, Simon SA: The structural organisation and composition of lens fiber junctions. J Cell Biol 108: 2255–2275 (1989).

    PubMed  Google Scholar 

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Fray, R.G., Wallace, A., Grierson, D. et al. Nucleotide sequence and expression of a ripening and water stress-related cDNA from tomato with homology to the MIP class of membrane channel proteins. Plant Mol Biol 24, 539–543 (1994). https://doi.org/10.1007/BF00024122

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  • DOI: https://doi.org/10.1007/BF00024122

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