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Use of a promoter-specific probe to identify two loci from the Rhizobium meliloti nodulation regulon

Plant Molecular Biology volume 12, pages 181–188 (1989)Cite this article

Abstract

The nodulation regulon of Rhizobium meliloti AK631 includes several operons (nodABC, hsnABC, hsnD, efn locus) which have in common a consensus promoter sequence called the nod box. A synthetic nod box probe was used to identify two additional nod boxes, n4 and n5, which were subcloned for study. By constructing lac fusions, we show that n4 and n5 sponsor induction of downstream regions as previously shown for n1-nodABC and n2-hsnABC. Using site-directed Tn5 mutagenesis, we find that the n5 locus plays a significant role in nodulation of alfalfa and sweetclover, whereas the n4 locus is important for alfalfa, but not for sweetclover. Hybridization data suggest that the n5 locus is conserved among Rhizobium species. In contrast, the n4 locus seems to be unique to Rhizobium meliloti strains, in agreement with the host-specific phenotype of n4 locus mutants. Thus, the use of a promoter probe allows us to identify nodulation genes which may be overlooked by standard methods such as random Tn5 mutagenesis.

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Affiliations

  1. Institute of Genetics, Biological Research Center, Hungarian Academy of Sciences, H-6701, Szeged, POB521, Hungary

    David Gerhold & Adam Kondorosi

  2. Microbiology Department, University of Tennessee, Knoxville, TN, USA

    David Gerhold & Gary Stacey

Authors
  1. David Gerhold
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  2. Gary Stacey
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  3. Adam Kondorosi
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Gerhold, D., Stacey, G. & Kondorosi, A. Use of a promoter-specific probe to identify two loci from the Rhizobium meliloti nodulation regulon. Plant Mol Biol 12, 181–188 (1989). https://doi.org/10.1007/BF00020503

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  • DOI: https://doi.org/10.1007/BF00020503

Key words

  • nodulation
  • Rhizobium
  • lac-fusions
  • promoter