Abstract
The cloning of small GTP-binding proteins from Petunia hybrida was performed using a PCR-based strategy. Degenerate primers were designed from the DTAGQE and FMETSA consensus sequences. Three different cDNAs were amplified. The deduced polypeptide sequences PhPCRGP1 and PhPCRGP2 were homologous to RB11_HUMAN and PhPCRGP3 to RAB1A_HUMAN. Using PhPCRGP3 as a probe, 8 identical clones were selected from a Petunia leaf cDNA library. They all encode the same 22.5 kDa polypeptide, PhRAB1, able to bind GTP in vitro and 72% identical to RAB1A_HUMAN. Hybridizable mRNAs encoding PhRAB1 accumulated preferentially in opened flowers.
References
Altschul S, Gish W, Willer W, Myers E, Lipman D: Basic local alignment search tool. J Mol Biol 215: 403–410 (1990).
Ausubel F, Brent R, Kingston R, Moore D, Seidman J, Smith J, Struhl K: Current protocols in molecular biology. Greene Publishing Associates/Wiley-interscience, New York (1991).
Bhullar R, Haslam RJ: Detection of 23–27 kDa GTP-binding proteins in platelets and other cells. Biochem J 245: 617–620 (1987).
Bourne HR, Sanders DA, McCormick F: The GTPase super-family: a conserved switch for diverse cellular functions. Nature 348: 125–132 (1990).
Chavrier P, Gorvel JP, Steltzer E, Simons K, Gruenberg J, Zerial M: Hypervariable C-terminal domain of rab proteins acts as a targetting signal. Nature 353: 769–772 (1991).
Cheon CI, Lee NG, Siddique ABM, Bal AK, Verma DPS: Roles of plant homologs of Rab1p and Rab7p in the biogenesis in the peribacteroid membrane, a subcellular compartment formed de novo during root nodule symbiosis. EMBO J 12: 4125–4135 (1993).
Dallmann G, Sticher L, Marshallsay C, Nagy F: Molecular characterisation of tobacco cDNAs encoding two small GTP-binding proteins. Plant Mol Biol 19: 847–857 (1992).
Drivas GT, Shih A, Coutavas E, D'Eustachio P, Rush MG: Identification and characterization of a human homolog of the Schizosaccharomyces pombe ras-like gene YPT-3. Oncogene 6: 3–9 (1991).
Dunn B, Stearns T, Botstein D: Specificity domains distinguish the Ras-related GTPases Ypt1 and Sec4. Nature 362: 563–565 (1993).
Ma H: GTP-binding proteins in plants: new members of an old family. Plant Mol Biol 26: 1611–1636 (1994).
Nagano Y, Murai N, Matsuro R, Sasaki Y: Isolation and characterization of cDNAs that encode eleven small GTP-binding proteins from Pisum sativum. Plant Cell Physiol 34: 447–455 (1993).
Novick P, Brennwald P: Friends and family: the role of the Rab GTPases in vesicular traffic. Cell 75: 597–601 (1993).
Palme K, Diefenthal T, Vingron M, Sander C, Schell J: Molecular cloning and structural analysis of genes from Zea mays (L.) coding for members of the ras-related ypt gene family. Proc Natl Acad Sci USA 89: 787–791 (1992).
Pfeffer SR: Rab GTPases: master regulators of membrane trafficking. Curr Opin Cell Biol 6: 522–526 (1994).
Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1989).
Segev N: Mediation of the attachment or fusion step in vesicular transport by the GTP-binding Ypt1 protein. Science 252: 1553–1556 (1991).
Terryn N, VanMontagu M, Inzé D: GTP-binding proteins in plants. Plant Mol Biol 22: 143–152 (1993).
Teyssendier de la Serve B, Jouanneau JP: Preferential incorporation ofexogenous cytokinin, N6-benzyladenine, into 18S and 25S ribosomal RNA of tobacco cells in suspension culture. Biochimie 61: 913–922 (1979).
Valencia A, Chardin P, Wittinghofer A, Sander C: The ras protein family: evolutionary tree and role of conserved amino acids. Biochemistry 30: 4637–4648 (1991).
Wilson DB, Wilson MF: Identification and subcellular localization of human rab5b, a new member of the ras-related superfamily of GTPases. J Clin Invest 89: 996–1005 (1992).
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Jako, C., de la Serve, B.T. Cloning and characterization of a cDNA encoding a Rab1-like small GTP-binding protein from Petunia hybrida . Plant Mol Biol 31, 923–926 (1996). https://doi.org/10.1007/BF00019480
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DOI: https://doi.org/10.1007/BF00019480