Abstract
The complete nucleotide sequence of Chinese rape mosaic virus has been determined. The virus is a member of the tobamovirus genus of plant virus and is able to infect Arabidopsis thaliana (L.) Heynh systemically. The analysis of the sequence shows a gene array that seems to be characteristic of crucifer tobamoviruses and which is slightly different from the one most frequently found in tobamoviruses. Based on gene organization and on comparisons of sequence homologies between members of the tobamoviruses, a clustering of crucifer tobamoviruses is proposed that groups the presently known crucifer tobamovirus into two viruses with two strains each. A name change of Chinese rape mosaic virus to oilseed rape mosaic virus is proposed.
Abbreviations
- 2-ME:
-
2-mercaptoethanol
- EDTA:
-
ethylenediaminetetraacetic acid
- SDS:
-
sodium dodecyl sulfate
- UTR:
-
untranslated region
- MP:
-
movement protein
- CP:
-
capsid protein
- CRMV:
-
Chinese rape mosaic virus
- TVCV:
-
turnip vein clearing virus
- PaMMV:
-
paprika mild mottle virus
- PMMV-I:
-
pepper mild mottle virus (Italian isolate)
- PMMV-S:
-
pepper mild mottle virus (Spanish isolate)
- ToMV:
-
tomato mosaic virus
- TMV:
-
tobacco mosaic virus
- TMGMV:
-
tobacco mild green mosaic virus
- ORSV:
-
odontoglossum ringspot virus
- SHMV:
-
sunn hemp mosaic virus
- CGMMV:
-
cucumber green mottle mosaic virus
- ORMV:
-
oilseed rape mosaic virus
References
Ausubel FM, Brent R, Kingston RE Moore DD, Seidman JG, Smith JA, Struhl K: Current Protocols in Molecular Biology. Greene Publishing Associates/Wiley Interscience, London (1987).
Dangl JL: Applications of Arabidopsis thaliana to outstanding issues in plant-pathogen interactions. Int Rev Cytol 144: 53–83 (1993).
Dawson WO: Tobamovirus-plant interactions. Virology 186: 359–367 (1992).
Dorokhov YL, Ivanov PA, Novikov VK, Agranovsky AA, Morozov SY, Efimov VA, Casper R, Atabekov JG: Complete nucleotide sequence and genome organization of a tobamovirus infecting Cruciferae plants. FEBS Lett 350: 5–8 (1994).
Fraile A, Aranda MA, Garciá-Arenal F: Evolution of the tobamoviruses (in press).
Garciá-Luque I, Ferrero ML, Rodríguez LM, Alonso E, de la Cruz A, Sanz AI, Vaquero C, Serr MT, Díaz-Ruiz JR: The nucleotide sequence of the coat protein genes and 3′ non-coding regions of two resistance-breaking tobamoviruses in pepper shows that they are different viruses. Arch Virol 131: 75–88 (1993).
Gibbs A, Po T, Liang-yi K, Ying-chun T, Randles JW: Classification of several tobamoviruses isolated in China on the basis of the amino acid composition of their virion proteins. Intervirology 18: 160–163 (1982).
Gibbs A: Tobamovirus classification. In: Van Regenmortel MHV, Fraenkel-Conrat H (eds) The Plant Viruses. The Rod Shaped Plant Viruses, vol 2, pp. 168–180. Plenum Press, New York (1986).
Ikeda R, Watanabe E, Watanabe Y, Okada Y: Nucleotide sequence of tobamovirus Ob which can spread systematically in N gene tobacco. J Gen Virol 74: 1939–1944 (1993).
Ishikawa M, Obata F, Kumagai T, Ohno T: Isolation of mutants of Arabidopsis thaliana in which accumulation of tobacco mosaic virus coat protein is reduced to low levels. Mol Gen Genet 230: 33–38 (1991).
Lartey RT, Hartson SD, Pennington RE, Sherwood JL, Melcher U: Occurrence of a vein-clearing tobamovirus in turnip. Plant Dis 77: 21–24 (1993).
Lartey RT, Lane LC, Melcher U: Electron microscopic and molecular characterization of turnip vein-clearing virus. Arch Virol 138: 287–298 (1994).
Li XH, Simon AE: Symptom intensification on cruciferous hosts by the virulent sat-RNA of turnip crinkle virus. Phytopathology 80: 238–242 (1990).
Martínez-Herrera D, Romero J, Martínez-Zapater JM, Ponz F: Suitability of Arabidopsis thaliana as a system for the study of plant-virus interactions. Fitopatoloía 29: 132–136 (1994).
Matthews REF: Plant Virology, 3rd ed. Academic Press, San Diego (1991).
Mayo MA, Martelli GP: New families and genera of plant viruses. Arch Virol 133: 496–498 (1993).
Palukaitis P, Randles JW, Ying-tuan T, Liang-yi K, Po T: Taxonomy of several tobamoviruses from China as determined by molecular hybridization analysis with complementary DNA. Intervirology 16: 136–141 (1981).
Palukaitis P, Zaitlin M: TMV: Intectivity and replication. In: Van Regenmortel MHV, Fraenkel-Conrat H (eds) The Plant Viruses. The Rod Shaped Plant Viruses, vol 2, pp. 111–119. Plenum Press, New York (1986).
Ryu KH, Park WM: Nucleotide sequence analysis of a cDNA clone encoding the 34K movement protein gene of odontoglossum ringspot virus, ORSV-Cy, the Korean isolate. Plant Mol Biol 26: 995–999 (1994).
Ryu KH, Choi CW, Choi JK, Park WM: Cloning of the 3′-terminal region encoding movement and coat proteins of a Korean isolate of odontoglossum ringspot virus. Arch Virol 140: 481–490 (1995).
Simon AE: Interaction between Arabidopsis thaliana and viruses. In: Meyerowitz EM, Somerville CR (eds) Arabidopsis, pp. 685–704. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1994).
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Aguilar, I., Sánchez, F., Martín, A.M. et al. Nucleotide sequence of Chinese rape mosaic virus (oilseed rape mosaic virus), a crucifer tobamovirus infectious on Arabidopsis thaliana . Plant Mol Biol 30, 191–197 (1996). https://doi.org/10.1007/BF00017814
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1007/BF00017814