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Journal of Plant Pathology

, Volume 101, Issue 4, pp 1047–1054 | Cite as

Complete genome sequences of five prunus necrotic ringspot virus isolates from Inner Mongolia of China and comparison to other PNRSV isolates around the world

  • Shuang Song
  • Ping-ping Sun
  • Ya-han Chen
  • Qiang Ma
  • Xiao-yun Wang
  • Ming-min ZhaoEmail author
  • Zheng-nan LiEmail author
Original Article
  • 51 Downloads

Abstract

Prunus necrotic ringspot virus (PNRSV) is an important virus of stone fruit trees (Prunus sp.). In this study, complete genomic sequences of five PNRSV isolates from P. persica (Pea1 and Pea4), P. avium (Che1 and Che2) and P. cerasifera (P.cerasifera1) in Inner Mongolia of China were determined and analyzed together with other previously published PNRSV sequences in the world. Phylogenetic analysis based on RNA3 sequences divided the five isolates into PV32 (Che1, Che2 and P.cerasifera1) and PV96 (Pea1 and Pea4) group, and re-grouped PNRSV isolates in the world into six groups including a new proposed group (PchMx-Azt) composed of two flowering peach isolates from Mexico. Distinct origins for RNAs of isolate P.cerasifera1 suggested potential reassortment in evolution of PNRSV. In addition, nine recombination events were predicted in RNA1–3 among the isolates.

Keywords

PNRSV Stone fruits Reassortment Recombination 

Notes

Acknowledgements

This work was supported by the State Key Laboratory of Crop Stress Biology for Arid Areas Open Project (CSBAA2016005) and the University Nursing Program for Young Scholars with Creative Talents in Heilongjiang Province (uNPYSCT-2018157). The authors are grateful to Dr. Lei Zhang from University of Florida, USA for giving great comments and suggestions on improving the manuscript.

Funding

The State Key Laboratory of Crop Stress Biology for Arid Areas Open Project (CSBAA2016005) and the University Nursing Program for Young Scholars with Creative Talents in Heilongjiang Province (uNPYSCT-2018157).

Compliance with ethical standards

Conflict of interest

The authors declare that they have no conflict of interest.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

Informed consent

Informed consent was obtained from all individual participants included in the study.

Supplementary material

42161_2019_335_MOESM1_ESM.docx (14 kb)
Supplementary Table S1 (DOCX 13.7 kb)
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Supplementary Table S2 (DOCX 14.1 kb)
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Supplementary Table S3 (DOCX 14.0 kb)

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Copyright information

© Società Italiana di Patologia Vegetale (S.I.Pa.V.) 2019

Authors and Affiliations

  1. 1.College of Horticulture and Plant ProtectionInner Mongolia Agricultural UniversityHohhotChina
  2. 2.College of AgricultureNortheast Agricultural UniversityHarbinChina

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