Australasian Plant Pathology

, Volume 45, Issue 5, pp 447–464 | Cite as

Colletotrichum species in Australia

  • Roger G. Shivas
  • Yu Pei Tan
  • Jacqueline Edwards
  • Quang Dinh
  • Aaron Maxwell
  • Vera Andjic
  • José R. Liberato
  • Chris Anderson
  • Dean R. Beasley
  • Kaylene Bransgrove
  • Lindy M. Coates
  • Karren Cowan
  • Rosalie Daniel
  • Jan R. Dean
  • Mereia Fong Lomavatu
  • Doris Mercado-Escueta
  • Roger W. Mitchell
  • Raja Thangavel
  • Lucy T. T. Tran-Nguyen
  • Bevan S. Weir
Original Paper

Abstract

Forty-four species of Colletotrichum are confirmed as present in Australia based on DNA sequencing analyses. Many of these species were identified directly as a result of two workshops organised by the Subcommittee on Plant Health Diagnostics in Australia in 2015 that covered morphological and molecular approaches to identification of Colletotrichum. There are several other species of Colletotrichum reported from Australia that remain to be substantiated by DNA sequence-based methods. This body of work aims to provide a basis from which to critically examine a number of isolates of Colletotrichum deposited in Australian culture collections.

Keywords

Biosecurity Diagnostics Molecular methods Phylogenetic methods Plant pathogens Taxonomy 

Notes

Acknowledgments

We thank Plant Health Australia (PHA) who provided funds for two workshops on the identification and classification of Colletotrichum species. The workshops were organised by the Subcommittee on Plant Health Diagnostics in collaboration with PHA as part of a professional development program for plant health diagnosticians. PHA sourced funding from the Department of Agriculture and Water Resources through a grant from the Plant Biosecurity and Response Reform program. The authors especially wish to thank Julie McClements (Culture Collection WAC, WA), and Robyn Brett (Herbarium VPRI, Vic) for providing cultures.

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Copyright information

© Australasian Plant Pathology Society Inc. 2016

Authors and Affiliations

  • Roger G. Shivas
    • 1
  • Yu Pei Tan
    • 1
  • Jacqueline Edwards
    • 2
    • 3
  • Quang Dinh
    • 2
  • Aaron Maxwell
    • 4
    • 5
  • Vera Andjic
    • 4
  • José R. Liberato
    • 6
  • Chris Anderson
    • 7
  • Dean R. Beasley
    • 1
  • Kaylene Bransgrove
    • 8
  • Lindy M. Coates
    • 9
  • Karren Cowan
    • 7
  • Rosalie Daniel
    • 10
  • Jan R. Dean
    • 9
  • Mereia Fong Lomavatu
    • 11
  • Doris Mercado-Escueta
    • 12
  • Roger W. Mitchell
    • 9
  • Raja Thangavel
    • 13
  • Lucy T. T. Tran-Nguyen
    • 6
  • Bevan S. Weir
    • 14
  1. 1.Department of Agriculture and FisheriesPlant Pathology Herbarium, Biosecurity QueenslandDutton ParkAustralia
  2. 2.Biosciences Research, Agriculture Victoria, Department of Economic Development, Jobs, Transport and ResourcesAgriBio Centre, La Trobe UniversityBundooraAustralia
  3. 3.School of Applied Systems BiologyLa Trobe UniversityMelbourneAustralia
  4. 4.Department of Agriculture and Water ResourcesPerth AirportAustralia
  5. 5.Murdoch UniversityPerthAustralia
  6. 6.Plant Industries Division, Department of Primary Industry and ResourcesDarwinAustralia
  7. 7.Biosecurity Queensland, Department of Agriculture and FisheriesBrisbaneAustralia
  8. 8.Australian Tropical HerbariumJames Cook UniversitySmithfieldAustralia
  9. 9.Horticulture and Forestry Science, Agri-Science Queensland, Department of Agriculture and FisheriesDutton ParkAustralia
  10. 10.New South Wales Department of Primary IndustriesCentral Coast Primary Industries CentreGosfordAustralia
  11. 11.Australian Centre for Pacific Islands ResearchUniversity of the Sunshine CoastMaroochydoreAustralia
  12. 12.Department of Agriculture and Water ResourcesRoseberyAustralia
  13. 13.Biosecurity New ZealandMinistry of Primary IndustriesAucklandNew Zealand
  14. 14.Landcare ResearchSt JohnsNew Zealand

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