Fungal Diversity

, Volume 77, Issue 1, pp 1–316 | Cite as

Taxonomy and phylogeny of dematiaceous coelomycetes

  • Nalin N. Wijayawardene
  • Kevin D. Hyde
  • Dhanushka N. Wanasinghe
  • Moslem Papizadeh
  • Ishani D. Goonasekara
  • Erio Camporesi
  • D. Jayarama Bhat
  • Eric H. C. McKenzie
  • Alan J. L. Phillips
  • Paul Diederich
  • Kazuaki Tanaka
  • Wen Jing Li
  • Narumon Tangthirasunun
  • Rungtiwa Phookamsak
  • Dong-Qin Dai
  • Asha J. Dissanayake
  • Gothamie Weerakoon
  • Sajeewa S. N. Maharachchikumbura
  • Akira Hashimoto
  • Misato Matsumura
  • Ali H. Bahkali
  • Yong Wang


Coelomycetous fungi are an artificial taxonomic group which produce conidia inside a cavity i.e. conidiomata. Coelomycetes comprise about, 1000 genera and 7000 species, which can be endophytic, pathogenic or saprobic. Traditional classification of coelomycetes was previously based on morphology, such as the shape of conidiomata and mode of conidiogenesis, while it was treated as a distinct group i.e. Deuteromycotina. Sequence based taxonomic studies has been used to accommodate asexual fungi in a natural classification system, resolve generic boundaries of polyphyletic genera and species complexes, as well as establish asexual-sexual links. Nevertheless, most of genera lack sequence data, thus, morphology based identification is still important when introducing new genera or species. In this paper we illustrate, describe, and provide taxonomic notes for 235 dematiaceous coelomycetous genera, including five new genera viz. Apiculospora, Didymellocamarosporium, Melanocamarosporium, Melnikia and Paulkirkia. Phylogenetic analyses of combined sequence data are provided to show placements of dematiaceous coelomycetes in Dothideomycetes, Leotiomycetes and Sordariomycetes. One-hundred and fifty-two (65 %) of genera have sequence data, thus, their taxonomic placement in a natural classification system, is listed as an outline. However, 83 genera still lack sequence data, hence, they are treated as Ascomycota, genera incertae sedis. In addition, separate analyses are provided where better taxonomic resolution is needed.


Asexual fungi Conidiogenesis Morphology Multi-gene analyses 



We acknowledge the International Highly Cited Research Group (IHCRRGP# 14–205), Deanship of Scientific Research, King Saud University, Riyadh, Kingdom of Saudi Arabia. Nalin N. Wijayawardene, Dhanushka N. Wanasinghe, Dong Qin Dai, Ishani D. Goonasekara and Wen Jing Li thank the Mushroom Research Foundation (MRF), Chiang Rai Province, Thailand for providing Postgraduate Scholarships. Nalin N. Wijayawardene would like to thank P.M. Kirk, V.A. Mel’nik, Buddhika Dilhan, Dmitrii Shabunin, Manjari Dissanayake and Lesley Ragab for being helpful to gather old literature. Kevin D. Hyde is grateful to the Chinese Academy of Sciences, project number 2013T2S0030, for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany, research grant from the Biodiversity Research and Training Program (BRT R253012) and The Thailand Research Fund (BRG 5280002). Alan J.L. Phillips thanks Mae Fah Luang University for a Visiting Professorship during the tenure of which this paper was finalised. Yong Wang would like to thank The International Scientific Cooperated Project of Guizhou Province (No[2013] 7004). Rungtiwa Phookamsak thanks the Royal Golden Jubilee Ph.D. Program (PHD/0090/2551). Erio Camporesi is grateful to Giancarlo Lombardi, Sergio Montanari and Gigi Stagioni for their help in identifying host plants of fresh collections. K. Tanaka would like to thank the Japan Society for the Promotion of Science (JSPS, 25440199 and 26291084) and Hirosaki University Grant for Exploratory Research by Young Scientists and Newly–appointed Scientists for financial support. Yong Wang thanks Yong-Cheng Long, Prof. De-Gang Zhao and Prof. Zhuo Chen for their help in sequencing and suggestions in molecular experiments. We would like to thank MFU grant No. 56101020032 for funding to study the taxonomy and phylogeny of Dothideomycetes. The authors also wish to acknowledge Saranyaphat Boonmee, Chayanard Phukhamsakda and Qing Tian. Ishani D. Goonasekara wishes to acknowledge Liu Ende, Assistant Curator, Herbarium, Kunming Institute of Botany, Chinese Academy of Sciences (KUN), Kunming, China, Wu HaiXia and staff of International Fungal Research and Development Centre (IFRD), Key Laboratory of Resource Insect Cultivation & Utilization State Forestry Administration, The Research Institute of Resource Insects, Chinese Academy of Forestry Kunming 650224, PR China and Danushka S. Tennakoon for their assistance with herbarium material.

Supplementary material

13225_2016_360_MOESM1_ESM.doc (813 kb)
Supplementary Table 1 (DOC 813 kb)


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Copyright information

© School of Science 2016

Authors and Affiliations

  • Nalin N. Wijayawardene
    • 1
    • 2
    • 3
  • Kevin D. Hyde
    • 2
    • 3
    • 4
    • 5
  • Dhanushka N. Wanasinghe
    • 2
    • 3
    • 4
    • 5
  • Moslem Papizadeh
    • 6
  • Ishani D. Goonasekara
    • 2
    • 3
    • 4
    • 5
  • Erio Camporesi
    • 7
    • 8
    • 9
  • D. Jayarama Bhat
    • 10
    • 11
  • Eric H. C. McKenzie
    • 12
  • Alan J. L. Phillips
    • 13
  • Paul Diederich
    • 14
  • Kazuaki Tanaka
    • 15
    • 23
  • Wen Jing Li
    • 2
    • 3
    • 4
    • 5
  • Narumon Tangthirasunun
    • 2
    • 3
    • 16
  • Rungtiwa Phookamsak
    • 2
    • 3
    • 4
    • 5
  • Dong-Qin Dai
    • 2
    • 3
    • 4
    • 5
  • Asha J. Dissanayake
    • 2
    • 3
    • 22
  • Gothamie Weerakoon
    • 19
  • Sajeewa S. N. Maharachchikumbura
    • 20
  • Akira Hashimoto
    • 15
    • 23
  • Misato Matsumura
    • 15
    • 23
  • Ali H. Bahkali
    • 21
  • Yong Wang
    • 1
    • 17
    • 18
  1. 1.Department of Plant Pathology, Agriculture CollegeGuizhou UniversityGuiyangPeople’s Republic of China
  2. 2.School of ScienceMae Fah Luang UniversityChiang RaiThailand
  3. 3.Center of Excellence in Fungal Research and School of ScienceMae Fah Luang UniversityChiang RaiThailand
  4. 4.Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of BotanyChinese Academy of SciencesKunmingPeople’s Republic of China
  5. 5.World Agroforestry Centre, East and Central AsiaKunmingPeople’s Republic of China
  6. 6.Microorganisms Bank, Iranian Biological Resource Center (IBRC), Academic Center for Education, Culture and Research (ACECR)TehranIran
  7. 7.A.M.B. Gruppo Micologico ForliveseForlìItaly
  8. 8.A.M.B. Circolo MicologicoBresciaItaly
  9. 9.Società per gli Studi Naturalistici della RomagnaBagnacavalloItaly
  10. 10.P.O. Goa VelhaIndia
  11. 11.Department of BotanyGoa UniversityGoaIndia
  12. 12.Manaaki Whenua Landcare ResearchAucklandNew Zealand
  13. 13.Faculty of Sciences, Biosystems and Integrative Sciences Institute (BioISI)University of LisbonLisbonPortugal
  14. 14.Musée national d’histoire naturelleLuxembourgLuxembourg
  15. 15.Faculty of Agriculture and Life ScienceHirosaki UniversityHirosakiJapan
  16. 16.Laboratoire Interdisciplinaire des Energies de Demain (LIED)Université Paris DiderotParisFrance
  17. 17.Guizhou Key Laboratory Agro-BioengineeringGuizhou UniversityGuiyangPeople’s Republic of China
  18. 18.Center for Research and Development of Fine Chemicals of Guizhou UniversityGuiyangPeople’s Republic of China
  19. 19.Scientific Affiliate, Integrative Research Center, Science & Education, The Field MuseumChicagoUSA
  20. 20.Guizhou Key Laboratory of Agricultural BiotechnologyGuizhou Academy of Agricultural SciencesGuiyang CityPeople’s Republic of China
  21. 21.College of Science, Botany and Microbiology DepartmentKing Saud UniversityRiyadhSaudi Arabia
  22. 22.Institute of Plant and Environment ProtectionBeijing Academy of Agriculture and Forestry SciencesBeijingPeople’s Republic of China
  23. 23.The United Graduate School of Agricultural SciencesIwate UniversityMoriokaJapan

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