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Journal of Genetics

, 98:4 | Cite as

The complete chloroplast genome of the threatened Dipentodon sinicus (Dipentodontaceae)

  • Ming-Tai An
  • Xing-Yong Cui
  • Jia-Xin Yang
  • Guo-Xiong HuEmail author
Research Note
  • 4 Downloads

Abstract

Dipentodon is a monotypic genus of Dipentodontaceae and the only species, Dipentodon sinicus, is scattered in southwest China as well as adjacent Myanmar, northeast India and northern Vietnam. This species was evaluated as vulnerable in ‘China Species Red List’. Here, we assembled and characterized the complete chloroplast (cp) genome of D. sinicus using Illumina sequencing data for the first time. The complete cp genome was 158,795 bp in length, consisting of a pair of inverted repeats of 26,587 bp, a large single-copy region of 87,233 bp and a small single-copy region of 18,388 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 30 tRNA genes and four rRNA genes. Phylogenetic analysis based on 16 complete cp genome sequences indicated that D. sinicus is a member of Huerteales, consistent with its position in the latest classification of flowering plants (AGP IV).

Keywords

chloroplast genome Dipentodontaceae Huerteales Dipentodon sinicus 

Notes

Acknowledgements

This work was supported by the Natural Science Foundation of Guizhou Province (Qian-Ke-He [2016]1049 and [2016]1033), Application Fundamentals Major Special Projects (Qian-Ke-He JZ [2014] 2002) and the Second Investigation on National Key Protected Wild Plant Resources in Guizhou Province (Lin-Hu-Fa-No. [2012] 87 and Qian-Lin-Hu-Tong-No. [2013] 251).

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Copyright information

© Indian Academy of Sciences 2019

Authors and Affiliations

  • Ming-Tai An
    • 1
    • 2
  • Xing-Yong Cui
    • 1
  • Jia-Xin Yang
    • 3
  • Guo-Xiong Hu
    • 2
    • 3
    Email author
  1. 1.College of ForestryGuizhou UniversityGuiyangPeople’s Republic of China
  2. 2.Research Center for Biodiversity and Nature ConservationGuizhou UniversityGuiyang People’s Republic of China
  3. 3.College of Life SciencesGuizhou UniversityGuiyangPeople’s Republic of China

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