Endophytic bacteria from Ilex paraguariensis shoot cultures: localization, characterization, and response to isothiazolone biocides
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Abstract
Nodal segment explants of Ilex paraguariensis, collected from greenhouse-grown plants, were found to contain endophytic bacteria. After culturing in bioreactors, 16 rRNA gene analyses and analytical profile index biochemical tests were used to identify these bacteria as Stenotrophomonas malthophilia. The presence of bacterial cells in the intercellular spaces of stem cortical parenchyma was detected in histological sections by scanning electron microscopy. A range of commercial isothiazolone biocides were tested for their ability to repress the growth of Gram-negative bacteria grown in liquid media during the micropropagation phase. The addition of 0.75 ml l−1 Delcide™ TG (5-chloro-2-methyl-4-isothiazolin-3-one + 2-methyl-4-isothiazolin-3-one, 1.05% and 0.45%, respectively) to the culture media resulted in 100% visibly clean cultures, with no suppression of shoot growth.
Keywords
Bioreactors Contamination 16S rDNA analysis Woody plant species MicropropagationNotes
Acknowledgments
The authors are grateful for funding support from SGCyT-UNNE (grant no. 014/10, 005/11), CONICET (PIP 0734), and Establecimiento Las Marías S.A.C.I.F.A. We extend our deepest appreciation to the companies that provided the biocides.
References
- Bacon C, Hinton D (2006) Bacterial endophytes: the endophytic niche, its occupants, and its utility. In: Gnanamanickam SS (ed) Plant-associated bacteria. Springer, The Netherlands, pp 155–194CrossRefGoogle Scholar
- Ballantyne B, Jordan ST (2004) Chemistry of biocides. In: Marrs TC, Ballantyne B (eds) Pesticide toxicology and international regulation. Wiley, London, pp 365–410Google Scholar
- Berg G, Egamberdieva D, Lugtenberg B, Hagemann M (2010) Symbiotic plant–microbe interactions: stress protection, plant growth promotion, and biocontrol by Stenotrophomonas. In: Seckbach J, Grube M (eds) Symbioses and stress: joint ventures in biology. Cellular origin, life in extreme habitats and astrobiology, vol. 17. Springer, The NetherlandsGoogle Scholar
- Berthouly M, Etienne H (2005) Temporary immersion system: a new concept for use liquid medium in mass propagation. In: Hvoslef-Eide A, Preil W (eds) Liquid culture system for in vitro plant propagation. Springer, The Netherlands, pp 165–195CrossRefGoogle Scholar
- Chun J, Lee JH, Jung Y, Kim S, Kim BK, Lim YW (2007) EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57:2259–2261PubMedCrossRefGoogle Scholar
- Clinical and Laboratory Standards Institute (2009) Performance standards for antimicrobial susceptibility testing; nineteenth informational supplement M100-S19. CLSI, WayneGoogle Scholar
- Collavino M, Sansberro P, Mroginski L, Aguilar M (2010) Comparison of in vitro solubilization activity of diverse bacteria native to acid soil and its ability to promote Phaseolus vulgaris plant growth. Biol Fertil Soils 46:727–736CrossRefGoogle Scholar
- Collier PJ, Austin P, Gilbert P (1991) Isothiazolone biocides: enzyme-inhibiting pro-drugs. Int J Pharm 16:195–201. doi: 10.1016/0378-5173(91)90237-I CrossRefGoogle Scholar
- Crossman L, Gould V, Dow J, Vernikos G, Okazaki A, Sebahia M, Saunders D, Arrowsmith C, Carver T, Peters N, Adlem E, Kerhornou A, Lord A, Murphy L, Seeger K, Squares R, Rutter S, Quail M, Rajandream A, Harris D, Churcher C, Bentley S, Parkhill J, Thomson N, Avison M (2008) The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants. Genome Biology 9:74–86. doi: 10.1186/gb-2008-9-4-r74 CrossRefGoogle Scholar
- Dawes CJ (1988) Introduction to Biological Electron Microscopy: Theory and Techniques, 3rd edn. Ladd Research Industries, Burlington, Vermont, USA, p 315Google Scholar
- Falkiner FR (1997) Antibiotics in plant tissue culture and micropropagation—what are we aiming at? In: Cassells AC (ed) Pathogen and microbial contamination management in micropropagation. Kluwer, Dordrecht, pp 155–160CrossRefGoogle Scholar
- George MW, Tripepi RR (2001) Plant Preservative Mixture ™ can affect shoot regeneration from leaf explants of Chrysanthemum, European birch, and Rhododendron. HortSci 36:768–769Google Scholar
- Kan FL, Chen ZY, Wang ET, Tian CF, Sui XH, Chen WX (2007) Characterization of symbiotic and endophytic bacteria isolated from root nodules of herbaceous legumes grown in Qinghai-Tibet plateau and in other zones of China. Arch Microbiol 188:103–115PubMedCrossRefGoogle Scholar
- Lata H, Li XC, Silva B, Moraes RM, Halda-Alija L (2006) Identification of IAA-producing endophytic bacteria from micropropagated Echinacea plants using 16S rRNA sequencing. Plant Cell Tiss Org Cult 85:353–359CrossRefGoogle Scholar
- Leifert C, Ritchie JY, Waities WM (1991) Contaminants of plant-tissue and cell cultures. World J Microb Biotechnol 7:452–469CrossRefGoogle Scholar
- Levitt J, Naidorf I, Shugaevsky P (1955) The undetected anaerobe in endodontics: a sensitive medium for detection of both aerobes and anaerobes. New York J Dentist 25:377–382Google Scholar
- Luna C, Collavino M, Mroginski L, Sansberro P (2008) Identification and control of bacterial contaminants from Ilex dumosa nodal segments culture in a temporal immersion bioreactor system using 16S rDNA analysis. Plant Cell Tiss Organ Cult 95:13–19. doi: 10.1007/s11240-008-9408-7 Google Scholar
- Luna C, Sansberro P, Mroginski L, Tarragó J (2003) Micropropagation of Ilex dumosa (Aquifoliaceae) from nodal segments in a tissue culture system. Biocell 27:205–212PubMedGoogle Scholar
- Minkwitz A, Berg G (2001) Comparison of antifungal activities and 16S ribosomal DNA sequences of clinical and environmental isolates of Stenotrophomonas maltophilia. J Clin Microbiol 39:139–145PubMedCrossRefGoogle Scholar
- Miyazaki J, Tan BH, Errington SG (2010) Eradication of endophytic bacteria via treatment of axillary buds of Petunia hybrid using Plant Preservative Mixture (PPM™). Plant Cell Tiss Organ Cult 102:365–372. doi: 10.1007/s11240-010-9741-5 CrossRefGoogle Scholar
- Murashige T, Skoog F (1962) A revised medium for rapid growth and bio-assays with tobacco tissue cultures. Physiol Plant 15:473–497CrossRefGoogle Scholar
- Paul AL, Semer C, Kucharek T, Ferl R (2001) The fungicidal and phytotoxic properties of benomyl and PPM in supplemented agar media supporting transgenic Arabidopsis plants for a space shuttle flight experiment. Appl Microbiol Biotechnol 55:480–485PubMedCrossRefGoogle Scholar
- Reed BM, Mentzer J, Tanprasert P, Yu X (1998) Internal bacterial contamination of micropropagated hazelnut: identification and antibiotic treatment. Plant Cell Tiss Org Cult 52:67–70CrossRefGoogle Scholar
- Rowntree JK (2006) Development of novel methods for the initiation of in vitro bryophyte cultures for conservation. Plant Cell Tiss Org Cult 87:191–201CrossRefGoogle Scholar
- Taghavi S, Garafola C, Monchy S, Newman L, Hoffman A, Weyens N, Barac T, Vangronsveld J, van der Lelie D (2009) Genome survey and characterization of endophytic bacteria exhibiting a beneficial effect on growth and development of poplar trees. Appl Environ Microbiol 75:748–757. doi: 10.1128/AEM.02239-08 PubMedCrossRefGoogle Scholar
- Weisburg WG, Barns SM, Pelletier DA, Lane DJ (1991) 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173:697–703PubMedGoogle Scholar
- Whipps J (2001) Microbial interactions and biocontrol in the rhizosphere. J Exp Bot 52:487–511PubMedCrossRefGoogle Scholar
- Williams T (2007) The mechanism of action of isothiazolone biocides. Power Plant Chem 9:14–22Google Scholar
- Whitby P, Carter K, Burns J, Royall J, LiPuma J, Stull T (2000) Identification and detection of Stenotrophomonas malthophilia by rRNA-directed PCR. J Clin Microbiol 38:4305–4309PubMedGoogle Scholar