Tree Genetics & Genomes

, 11:92 | Cite as

Genetic provenance and best practice woodland management: a case study in native alder (Alnus glutinosa)

  • Gemma E. Beatty
  • W. Ian Montgomery
  • David G. Tosh
  • Jim Provan
Original Article
Part of the following topical collections:
  1. Germplasm Diversity

Abstract

In recent years, the native woodlands of Europe, including those of Britain and Ireland, have increasingly come under threat from a range of biotic and abiotic factors, and are therefore a conservation priority demanding careful management in order to realise their inherent ecological and cultural benefits. Because the distribution of genetic variation across populations and regions is increasingly considered an important component of woodland management, we carried out a population genetic analysis on black alder (Alnus glutinosa) across Northern Ireland in order to inform “best practice” strategies. Our findings suggest that populations harbour high levels of genetic diversity, with very little differentiation between populations. Significant F IS values were observed in over half of the populations analysed, however, which could reflect inbreeding as a result of the patchy occurrence of alder in Northern Ireland, with scattered, favourable damp habitats being largely isolated from each other by extensive tracts of farmland. Although there is no genetic evidence to support the broad-scale implementation of tree seed zones along the lines of those proposed for native woodlands in Great Britain, we suggest that the localised occurrence of rare chloroplast haplotypes should be taken into account on a case-by-case basis. This, coupled with the identification of populations containing high genetic diversity and that are broadly representative of the region as a whole, will provide a sound genetic basis for woodland management, both in alder and more generally for species that exhibit low levels of genetic differentiation.

Keywords

Gene flow Genetic diversity Inbreeding Microsatellites Population genetics 

Notes

Acknowledgments

This study was funded by the Natural Heritage Research Partnership (NHRP) between the Northern Ireland Environment Agency (NIEA) and Quercus, Queen’s University Belfast (QUB). John Farren acted as NIEA Client Officer.

Data archiving statement

All data will be deposited in DRYAD on acceptance.

Supplementary material

11295_2015_919_MOESM1_ESM.doc (58 kb)
Table S1 (DOC 58 kb)
11295_2015_919_MOESM2_ESM.doc (141 kb)
Table S2 (DOC 141 kb)
11295_2015_919_MOESM3_ESM.pptx (1.6 mb)
Figs. S1-S11 Bubble plots showing allele frequencies at each locus. Size of bubbles are proportional to allele frequency. (PPTX 1629 kb)

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Copyright information

© Springer-Verlag Berlin Heidelberg 2015

Authors and Affiliations

  • Gemma E. Beatty
    • 1
    • 2
    • 3
  • W. Ian Montgomery
    • 1
    • 2
    • 3
  • David G. Tosh
    • 1
    • 2
  • Jim Provan
    • 1
    • 2
    • 3
  1. 1.School of Biological SciencesQueen’s University BelfastBelfastUK
  2. 2.Quercus, School of Biological SciencesQueen’s University BelfastBelfastUK
  3. 3.Institute for Global Food SecurityQueen’s University BelfastBelfastUK

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