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Reviews in Fish Biology and Fisheries

, Volume 25, Issue 2, pp 337–363 | Cite as

Habitat-specific food webs and trophic interactions supporting coastal-dependent fishery species: an Australian case study

  • Kátya G. AbrantesEmail author
  • Adam Barnett
  • Ronald Baker
  • Marcus Sheaves
Reviews

Abstract

Coastal ecosystems such as estuaries, tidal wetlands and shallow coastal waters are often highly productive and provide important habitats to many recreationally and commercially important fish and invertebrates that use these areas as nursery, feeding and/or reproduction grounds. The diversity of coastlines found worldwide results in differences in types of provisioning and function, and in community structure and trophic organisation. Since almost all coastal fishery species require particular components of the seascapes during specific stages of their life-cycles, it is important to understand the way fish use different habitats throughout ontogeny. Access to rich feeding environments is a key contributor to habitat value, and so knowledge on food webs and feeding relationships, and how these vary over space and time, is central to understanding the importance of the different coastal environments. However, the functional roles of the different habitats in supporting fishery species are still not well understood for most regions. In this study, we review and discuss the available literature to identify key knowledge gaps in the understanding of habitat- and context-specific food webs and trophic interactions supporting fisheries species relying on coastal ecosystems. We use Australia and Australian fisheries species as a case-study, as Australia’s extensive coastline encompasses many of the coastal ecosystems and habitats found globally. Given the ever increasing transformation of coastal landscapes by either direct human action or by sea level rise and changing climate, these knowledge gaps need to be urgently addressed for appropriate management and mitigation of various impacts.

Keywords

Connectivity Critical habitats Fish Fisheries Primary producers 

Notes

Acknowledgments

This review was supported by the Fisheries Research and Development Corporation (FRDC) grant and by a grant from Winifred Violet Scott Foundation to KA. RB is partially supported by a post-doctoral fellowship from the Tropical Landscapes Joint Venture between CSIRO and JCU. We thank the reviewers for constructive comments on an earlier version of this manuscript.

References

  1. Abrantes KG, Sheaves M (2008) Incorporation of terrestrial wetland material into aquatic food webs in a tropical estuarine wetland. Estuar Coast Shelf Sci 80:401–412Google Scholar
  2. Abrantes KG, Sheaves M (2009a) Food web structure in a near-pristine mangrove area of the Australian Wet Tropics. Estuar Coast Shelf Sci 82:597–607Google Scholar
  3. Abrantes KG, Sheaves M (2009b) Sources of nutrition supporting juvenile penaeid prawns in an Australian dry tropics estuary. Mar Freshw Res 60:949–959Google Scholar
  4. Abrantes KG, Sheaves M (2010) Importance of freshwater flow in terrestrial-aquatic energetic conectivity in intermittently connected estuaries of tropical Australia. Mar Biol 157:2071–2086Google Scholar
  5. Abrantes KG, Barnett A, Marwick TR, Bouillon S (2013) Importance of terrestrial subsidies for estuarine food webs in contrasting east African catchments. Ecosphere 4:Art14Google Scholar
  6. Abrantes KG, Barnett A, Bouillon S (2014a) Stable isotope-based community metrics as a tool to identify patterns in food web structure in east African estuaries. Funct Ecol 28:270–282Google Scholar
  7. Abrantes KG, Johnston R, Connolly RM, Sheaves M (2014b) Importance of mangrove carbon for aquatic food webs in wet-dry tropical estuaries. Estuar Coast. doi: 10.1007/s12237-014-9817-2 Google Scholar
  8. Alongi DM (1996) The dynamic of benthic nutrient pools and fluxes in tropical mangrove forests. J Mar Freshw Res 54:123–148Google Scholar
  9. Alongi DM (2009) The energetics of mangrove forests. Springer, DordrechtGoogle Scholar
  10. Alongi DM, Ayukai T, Brunskill GJ, Clough BF, Wolanski E (1998) Sources, sinks, and export of organic carbon through a tropical, semi-enclosed delta (Hinchinbrook Channel, Australia). Mangroves Salt Marshes 2:237–242Google Scholar
  11. Altieri AH, Bertness MD, Coverdale TC, Herrmann NC, Angelini C (2012) A trophic cascade triggers collapse of a salt-marsh ecosystem with intensive recreational fishing. Ecology 93:1402–1410PubMedGoogle Scholar
  12. Al-Zaidan ASY, Kennedy H, Jones DA, Al-Mohanna SY (2006) Role of microbial mats in Sulaibikhat Bay (Kuwait) mudflat food webs: evidence from δ13C analysis. Mar Ecol Prog Ser 308:27–36Google Scholar
  13. Ayvazian SG, Hyndes GA (1995) Surf-zone fish assemblages in south-western Australia: do adjacent nearshore habitats and the warm Leeuwin Current influence the characteristics of the fish fauna? Mar Biol 122:527–536Google Scholar
  14. Baker R, Sheaves M (2005) Redefining the piscivore assemblage of shallow estuarine nursery habitats. Mar Ecol Prog Ser 291:197–213Google Scholar
  15. Baker R, Sheaves M (2006) Visual surveys reveal high densities of large piscivores in shallow estuarine nurseries. Mar Ecol Prog Ser 323:75–82Google Scholar
  16. Baker R, Sheaves M (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetl Ecol Manag 17:317–330Google Scholar
  17. Baker R, Fry B, Rozas LP, Minello TJ (2013) Hydrodynamic regulation of salt marsh contributions to aquatic food webs. Mar Ecol Prog Ser 490:37–52Google Scholar
  18. Balcombe SR, Bunn SE, Smith FJM, Davies PM (2005) Variability of fish diets between dry and flood periods in an arid zone floodplain river. J Fish Biol 67:1552–1567Google Scholar
  19. Barbier EB, Hacker SD, Kennedy C, Koch EW, Stier AC, Silliman BR (2011) The value of estuarine and coastal ecosystem services. Ecol Monogr 81:169–193Google Scholar
  20. Barnett A, Semmens JM (2012) Sequential movement into coastal habitats and high spatial overlap of predator and prey suggest high predation pressure in protected areas. Oikos 121:882–890Google Scholar
  21. Barnett A, Abrantes KG, Stevens JD, Semmens JM (2011) Site-fidelity and sex-specific migrations in a mobile apex predator: implications for conservation and ecosystem dynamics. Anim Behav 81:1039–1041Google Scholar
  22. Barth JA, Menge BA, Lubchenco J, Chan F, Bane JM, Kirincich AR et al (2007) Delayed upwelling alters nearshore coastal ocean ecosystems in the northern California current. Proc Natl Acad Sci USA 104:3719–3724PubMedCentralPubMedGoogle Scholar
  23. Bassett A, Barborne E, Elliott M, Li B, Jorgensen SE, Lucena-Moya P, Pardo I, Mouillot D (2013) A unifying approach to understanding transitional waters: fundamental properties emerging from ecotone ecosystems. Estuar Coast Shelf Sci 132:5–16Google Scholar
  24. Beck MW, Heck KL Jr, Able KW, Childers DL, Eggleston DB et al (2001) The identification, conservation, and management of estuarine and marine nurseries for fish and invertebrates. Bioscience 51:633–641Google Scholar
  25. Begg GA, Hopper GA (1997) Feeding patterns of school mackerel (Scomberomorus queenslandicus) and spotted mackerel (S. munroi) in Queensland east-coast waters. Mar Freshw Res 48:565–571Google Scholar
  26. Belgrano A, Scharler UM, Dunne J, Ulanowicz RE (2014) Aquatic food webs: an ecosystem approach. Oxford University Press, OxfordGoogle Scholar
  27. Belicka LL, Burkholder DA, Fourqurean JW, Heithaus MR, Macko SA, Jaffe R (2012) Stable isotope and fatty acid biomarkers of seagrass, epiphytic, and algal organic matter of consumers in a nearly pristine seagrass ecosystem. Mar Freshw Res 63:1085–1097Google Scholar
  28. Bergamino L, Lercari D, Defeo O (2011) Food web structure of sandy beaches: temporal and spatial variation using stable isotope analysis. Estuar Coast Shelf Sci 91:536–543Google Scholar
  29. Blaber SJM, Blaber TG (1980) Factors affecting the distribution of juvenile estuarine and inshore fish. J Fish Biol 17:143–162Google Scholar
  30. Bloomfield AL, Gillanders BM (2005) Fish and invertebrate assemblages in seagrass, mangrove, saltmarsh, and nonvegetated habitats. Estuaries 28:63–77Google Scholar
  31. Boesch D, Turner RE (1984) Dependence of fishery species on salt marshes: the role of food and refuge. Estuaries 7:460–468Google Scholar
  32. Boon PI, Bird FL, Bunn SE (1997) Diet of the intertidal callianassid shrimps Biffarius arenosus and Trypea australiensis (Decapoda: Thalassinidea) in Western Port (southern Australia), determined with multiple stable-isotope analyses. Mar Freshw Res 48:503–511Google Scholar
  33. Bostrom C, Pittman SJ, Simenstad C, Kneib RT (2011) Seascape ecology of coastal biogenic habitats: advances, gaps, and challenges. Mar Ecol Prog Ser 427:191–217Google Scholar
  34. Bouillon S, Connolly RM (2009) Carbon exchange among tropical coastal ecosystems. In: Nagelkerken I (ed) Ecological connectivity among tropical coastal ecosystems. Springer, New York, pp 45–70Google Scholar
  35. Bouillon S, Connolly RM, Lee SY (2008) Organic matter exchange and cycling in mangrove ecosystems: recent insights from stable isotope studies. J Sea Res 59:44–58Google Scholar
  36. Bucher DJ, Saenger P (1991) An inventory of Australian estuaries and enclosed marine waters: an overview of results. Aust Geogr Stud 29:370–381Google Scholar
  37. Bui THH, Lee SY (2014) Does ‘you are what you eat’ apply to mangrove grapsid crabs? PLoS ONE 9:e89074PubMedCentralPubMedGoogle Scholar
  38. Bunt JS, Boto KG, Boto G (1979) A survey method for estimating potential levels of mangrove forest primary production. Mar Biol 52:123–128Google Scholar
  39. Butler AJ, Jernakoff P (1999) Seagrass in Australia: strategic review and development of an R&D plan. CSIRO Publishing, ClaytonGoogle Scholar
  40. Campbell EE (1996) The global distribution of surf diatom accumulations. Rev Chil Hist Nat 69:495–501Google Scholar
  41. Campbell SJ, McKenzie LJ (2004) Flood related loss and recovery of intertidal seagrass meadows in southern Queensland, Australia. Estuar Coast Shelf Sci 60:477–490Google Scholar
  42. Carruthers TJB, Dennison WC, Longstaff BJ, Waycott M, Abal EG, McKenzie LJ, Long WJL (2002) Seagrass habitats of Northeast Australia: models of key processes and controls. Bull Mar Sci 71:1153–1169Google Scholar
  43. Carseldine L, Tibbetts IR (2005) Dietary analysis of the herbivorous hemiramphid Hyporhamphus regularis ardelio: an isotopic approach. J Fish Biol 66:1589–1600Google Scholar
  44. Chin A, Heupel M, Simpfendorfer C, Tobin A (2013) Ontogenetic movements of juvenile blacktip reef sharks: evidence of dispersal and connectivity between coastal habitats and coral reefs. Aquat Conserv Mar Freshw Ecosyst 23:468–474Google Scholar
  45. Clements KD, Choat JH (1997) Comparison of herbivory in the closely-related marine fish genera Girella and Kyphosus. Mar Biol 127:579–586Google Scholar
  46. Clough B (1998) Mangrove forest productivity and biomass accumulation in Hinchinbrook Channel, Australia. Mangroves Salt Marshes 2:191–198Google Scholar
  47. Colombini I, Chelazzi L (2003) Influence of marine allochthonous input on sandy beach communities. Oceanogr Mar Biol Annu Rev 41:115–159Google Scholar
  48. Connell SD (1998) Patterns of piscivory by resident predatory reef fish at One Tree Reef, Great Barrier Reef. Mar Freshw Res 49:25–30Google Scholar
  49. Connolly RM (2009) Fish on Australian saltmarshes. In: Saintilan N (ed) Australian saltmarsh ecology. CSIRO Publishing, CollingwoodGoogle Scholar
  50. Connolly RM, Dalton A, Bass DA (1997) Fish use of an inundated saltmarsh flat in a temperate Australian estuary. Aust J Ecol 22:222–226Google Scholar
  51. Connolly RM, Hindell JS, Gorman D (2005) Seagrass and epiphytic algae support nutrition of a fisheries species, Sillago schomburgkii, in adjacent intertidal habitats. Mar Ecol Prog Ser 286:69–79Google Scholar
  52. Connolly RM, Currie DR, Danaher KF, Dunning M, Melzer A et al (2006) Intertidal wetlands of Port Curtis: ecological patterns and processes and their implications. Technical report no. 43, CRC for coastal zone, estuary and waterway management, BrisbaneGoogle Scholar
  53. Connolly RM, Schlacher TA, Gaston TF (2009) Stable isotope evidence for trophic subsidy of coastal benthic fisheries by river discharge plumes off small estuaries. Mar Biol Res 5:164–171Google Scholar
  54. Costanza R, d’Arge R, de Groot R, Farber S, Grasso M et al (1997) The value of the world’s ecosystem services and natural capital. Nature 387:253–260Google Scholar
  55. Crawley KR, Hyndes GA, Ayvazian SG (2006) Influence of different volumes and types of detached macrophytes on fish community structure in surf zones of sandy beaches. Mar Ecol Prog Ser 307:233–246Google Scholar
  56. Crawley KR, Hyndes GA, Vanderklift MA, Revill AT, Nichols PD (2009) Allochthonous brown algae are the primary food source for consumers in a temperate, coastal environment. Mar Ecol Prog Ser 376:33–44Google Scholar
  57. Crinall SM, Hindell JS (2004) Assessing the use of saltmarsh flats by fish in a temperate Australian embayment. Estuaries 27:728–739Google Scholar
  58. Currin CA, Newell SY, Paerl HW (1995) The role of standing dead Spartina alterniflora and benthic microalgae in salt marsh food webs: considerations based on multiple stable isotope analysis. Mar Ecol Prog Ser 121:99–116Google Scholar
  59. Currin CA, Wainright SC, Able KW, Weinstein MP, Fuller CM (2003) Determination of food web support and trophic position of the mummichog, Fundulus heteroclitus, in New Jersey smooth cordgrass (Spartina alterniflora), common reed (Phragmites australis), and restored salt marshes. Estuaries 26:495–510Google Scholar
  60. Dall W, Hill B, Rothlisberg P, Staples D (1990) The biology of the penaeidae. Adv Mar Biol 27:1–489Google Scholar
  61. Davenport SR, Bax NJ (2002) A trophic study of a marine ecosystem off southeastern Australia using stable isotopes of carbon and nitrogen. Can J Fish Aquat Sci 59:514–530Google Scholar
  62. Davis B, Johnston R, Baker R, Sheaves M (2012) Fish utilisation of wetland nurseries with complex hydrological connectivity. PLoS ONE 7:e49107PubMedCentralPubMedGoogle Scholar
  63. Davis JP, Pitt KA, Fry B, Olds AD, Connolly RM (2014) Seascape-scale trophic links for fish on inshore coral reefs. Coral Reefs 33:897–907Google Scholar
  64. de Lestang S, Platell ME, Potter IC (2000) Dietary composition of the blue swimmer crab Portunus pelagicus L. Does it vary with body size and shell state and between estuaries? J Exp Mar Biol Ecol 246:241–257PubMedGoogle Scholar
  65. Deegan LA (1993) Nutrient and energy transport between estuaries and coastal marine ecosystems by fish migration. Can J Fish Aquat Sci 50:74–79Google Scholar
  66. Deegan LA, Hughes JE, Rountree RA (2000) Salt marsh ecosystem support of marine transient species. In: Weinstein MP, Kreeger DA (eds) Concepts and controversies in tidal marsh ecology. Kluwer, Dordrecht, pp 333–365Google Scholar
  67. Degré D, Leguerrier D, Armynot du Chatelet E, Rzeznik J, Auguet J-C et al (2006) Comparative analysis of the food webs of two intertidal mudflats during two seasons using inverse modelling: Aiguillon Cove and Brouage Mudflat, France. Estuar Coast Shelf Sci 69:107–124Google Scholar
  68. Demopoulos AWJ, Cormier N, Ewel KC, Fry B (2008) Use of multiple chemical tracers to define habitat use of Indo-Pacific mangrove crab, Scylla Serrata (Decapoda: Portunidae). Estuar Coasts 31:371–381Google Scholar
  69. Dittel AI, Epifanio CE, Schwalm SM, Fantle MS, Fogel ML (2000) Carbon and nitrogen sources for juvenile blue crabs Callinectes sapidus in coastal wetlands. Mar Ecol Prog Ser 194:103–112Google Scholar
  70. Doropoulos C, Hyndes GA, Lavery PS, Tuya F (2009) Dietary preferences of two seagrass inhabiting gastropods: Allochthonous vs autochthonous resources. Estuar Coast Shelf Sci 83:13–18Google Scholar
  71. Duke N (2006) Australia’s mangroves. University of Queensland, BrisbaneGoogle Scholar
  72. Dunning M, McKinnon S, Lu C, Yeatman J, Cameron D (1994) Demersal cephalopods of the Gulf of Carpentaria, Australia. Mar Freshw Res 45:351–374Google Scholar
  73. Duong HLS, Fairweather PG (2011) Effects of sandy beach cusps on wrack accumulation, sediment characteristics and macrofaunal assemblages. Austral Ecol 36:733–744Google Scholar
  74. Edgar GJ, Shaw C (1995a) The production and trophic ecology of shallow-water fish assemblages in southern Australia I. Species richness, size-structure and production of fishes in Western Port, Victoria. J Exp Mar Biol Ecol 194:53–81Google Scholar
  75. Edgar GJ, Shaw C (1995b) The production and trophic ecology of shallow-water fish assemblages in southern Australia II. Diets of fishes and trophic relationships between fishes and benthos at Western Port, Victoria. J Exp Mar Biol Ecol 194:83–106Google Scholar
  76. Edgar GJ, Shaw C (1995c) The production and trophic ecology of shallow-water fish assemblages in southern Australia III. General relationships between sediments, seagrasses, invertebrates and fishes. J Exp Mar Biol Ecol 194:107–131Google Scholar
  77. Edwards HJ, Elliott IA, Pressey RL, Mumby PJ (2010) Incorporating ontogenetic dispersal, ecological processes and conservation zoning into reserve design. Biol Conserv 143:457–470Google Scholar
  78. Elliott M, Kennish MJ (2011) Human-induced problems (uses and abuses). In: Wolanski E, MsLusky DS (eds) Treatise on estuarine and coastal science, vol 8. Elsevier, Amsterdam, p 315Google Scholar
  79. Fairweather PG, Quinn GP (1995) Marine ecosystems: hard and soft shores. State of the Marine Environment Report, Ocean Rescue 2000, AustraliaGoogle Scholar
  80. Fantle MS, Dittel AI, Schwalm SM, Epifanio CE, Fogel ML (1999) A food web analysis of the juvenile blue crab, Callinectes sapidus, using stable isotopes in whole animals and individual amino acids. Oecologia 120:416–426Google Scholar
  81. Fernandes L, Day JON, Lewis A, Slegers S, Kerrigan B et al (2005) Establishing representative no-take areas in the Great Barrier Reef: large-scale implementation of theory on marine protected areas. Conserv Biol 19:1733–1744Google Scholar
  82. Fisher S, Brown M, Willis D (2001) Temporal food web variability in an upper Missouri River backwater: energy origination points and transfer mechanisms. Ecol Freshw Fish 10:154–167Google Scholar
  83. Fogarty MJ (2014) The art of ecosystem-based fishery management. Can J Fish Aquat Sci 71:479–490Google Scholar
  84. Fredriksen S (2003) Food web studies in a Norwegian kelp forest based on stable isotope (δ13C and δ15N) analysis. Mar Ecol Prog Ser 260:71–81Google Scholar
  85. Fry B (1988) Food web structure on Georges Bank from stable C, N, and S isotopic compositions. Limnol Oceanogr 33:1182–1190Google Scholar
  86. Fry B (2008) Open bays as nurseries for Louisiana brown shrimp. Estuar Coast 31:776–789Google Scholar
  87. Fry B, Ewel KC (2003) Using stable isotopes in mangrove fisheries research: a review and outlook. Isot Environ Health Stud 39:191–196Google Scholar
  88. Fry B, Scalan RS, Parker PL (1983) 13C/12C ratios in marine food webs of the Torres Strait, Queensland. Mar Freshw Res 34:707–715Google Scholar
  89. Galván K, Fleeger JW, Fry B (2008) Stable isotope addition reveals dietary importance of phytoplankton and microphytobenthos to salt marsh infauna. Mar Ecol Prog Ser 359:37–49Google Scholar
  90. Gehrke P (2007) A comparative analysis of coastal fishery food webs in the Great Barrier Reef region. CSIRO: Water for a Healthy Country National Research Flagship Report, 42 ppGoogle Scholar
  91. Giarrizzo T, Schwamborn R, Saint-Paul U (2011) Utilization of carbon sources in a northern Brazilian mangrove ecosystem. Estuar Coast Shelf Sci 95:447–457Google Scholar
  92. Gillanders BM, Kingsford MJ (2002) Impact of changes in flow of freshwater on estuarine and open coastal habitats and the associated organisms. Oceanogr Mar Biol 40:233–309Google Scholar
  93. Gillies CL, Stark JS, Johnstone GJ, Smith SDA (2012) Carbon flow and trophic structure of an Antarctic coastal benthic community as determined by δ13C and δ15N. Estuar Coast Shelf Sci 97:44–57Google Scholar
  94. Gillson J (2011) Freshwater flow and fisheries production in estuarine and coastal systems: where a drop of rain is not lost. Rev Fish Sci 19:168–186Google Scholar
  95. Gillson J, Scandol J, Suthers I (2009) Estuarine gillnet fishery catch rates decline during drought in eastern Australia. Fish Res 99:26–37Google Scholar
  96. Girvan M, Newman MEJ (2002) Community structure in social and biological networks. Proc Natl Acad Sci 99:7821–7826PubMedCentralPubMedGoogle Scholar
  97. Gray CA, Miskiewicz AG (2000) Larval fish assemblages in south–east Australian coastal waters: seasonal and spatial structure. Estuar Coast Shelf Sci 50:549–570Google Scholar
  98. Grober-Dunsmore R, Pittman SJ, Caldow C, Kendall MS, Frazer TK (2009) A landscape ecology approach for the study of ecological connectivity across tropical marine seascapes. In: Nagelkerken I (ed) Ecological connectivity among tropical coastal ecosystems. Springer, Berlin, pp 493–530Google Scholar
  99. Gu B, Schelske CL, Hoyer MV (1996) Stable isotopes of carbon and nitrogen as indicators of diet and trophic structure of the fish community in a shallow hypereutrophic lake. J Fish Biol 49:1233–1243Google Scholar
  100. Guarinello ML, Shumchenia EJ, King JW (2010) Marine habitat classification for ecosystem-based management: a proposed hierarchical framework. Environ Manag 45:793–806Google Scholar
  101. Guest MA, Connolly RM (2004) Fine-scale movement and assimilation of carbon in saltmarsh and mangrove habitat by resident animals. Aquat Ecol 38:599–609Google Scholar
  102. Guest M, Connolly R (2006) Movement of carbon among estuarine habitats: the influence of saltmarsh patch size. Mar Ecol Prog Ser 310:15–24Google Scholar
  103. Guest M, Connolly RM, Lee SY, Loneragan NR, Breitfuss MJ (2006) Mechanism for the small-scale movement of carbon among estuarine habitats: organic matter transfer not crab movement. Oecologia 148:88–96PubMedGoogle Scholar
  104. Guest MA, Nichols PD, Frusher SD, Hirst AJ (2008) Evidence of abalone (Haliotis rubra) diet from combined fatty acid and stable isotope analyses. Mar Biol 153:579–588Google Scholar
  105. Hadwen WL, Russell GL, Arthington AH (2007) Gut content- and stable isotope-derived diets of four commercially and recreationally important fish species in two intermittently open estuaries. Mar Freshw Res 58:363–375Google Scholar
  106. Harborne AR (2009) First among equals: why some habitats should be considered more important than others during marine reserve planning. Environ Conserv 36:87–90Google Scholar
  107. Harris GP, Heathwaite A (2012) Why is achieving good ecological outcomes in rivers so difficult? Freshw Biol 57:91–107Google Scholar
  108. Haywood MDE, Vance DJ, Loneragan NR (1995) Seagrass and algal beds as nursery habitats for tiger prawns (Penaeus semisulcatus and P. esculentus) in a tropical Australian estuary. Mar Biol 122:213–223Google Scholar
  109. Heck KL Jr, Hays CG, Orth RJ (2003) Critical evaluation of the nursery hypothesis for seagrass meadows. Mar Ecol Prog Ser 253:123–136Google Scholar
  110. Heck KL, Carruthers TJB, Duarte CM, Hughes AR, Kendrick G, Orth RJ, Williams SW (2008) Trophic transfers from seagrass meadows subsidize diverse marine and terrestrial consumers. Ecosystems 11:1198–1210Google Scholar
  111. Heithaus ER, Heithaus PA, Heithaus MR, Burkholder D, Layman CA (2011) Trophic dynamics in a relatively pristine subtropical fringing mangrove community. Mar Ecol Prog Ser 428:49–61Google Scholar
  112. Hill BJ (1976) Natural food, foregut clearance-rate and activity of the crab Scylla serrata. Mar Biol 34:109–116Google Scholar
  113. Hill BJ (1994) Offshore spawning by the portunid crab Scylla serrata (Crustacea: Decapoda). Mar Biol 120:379–384Google Scholar
  114. Hindell JS (2006) Assessing the trophic link between seagrass habitats and piscivorous fishes. Mar Freshw Res 57:121–131Google Scholar
  115. Hoedt FE, Dimmlich WF (1995) Egg and larval abundance and spawning localities of the anchovy (Engraulis australis) and pilchard (Sardinops neopilchardus) near Phillip Island, Victoria. Mar Freshw Res 46:735–743Google Scholar
  116. Hoedt FE, Dimmlich WF, Dann P (1995) Seasonal variation in the species and size composition of the clupeoid assemblages in Western Port, Victoria. Mar Freshw Res 46:1085–1091Google Scholar
  117. Hoey AS (2010) Size matters: macroalgal height influences the feeding response of coral reef herbivores. Mar Ecol Prog Ser 411:299–302Google Scholar
  118. Hollingsworth A, Connolly RM (2006) Feeding by fish visiting inundated subtropical saltmarsh. J Exp Mar Biol Ecol 336:88–98Google Scholar
  119. Howard RK (1984) The trophic ecology of caridean shrimps in an eelgrass community. Aquat Bot 18:155–174Google Scholar
  120. Hughes R, Williams S, Duarte C, Heck KJ, Waycott M (2009) Associations of concern: declining seagrasses and threatened dependent species. Front Ecol Environ 7:242–246Google Scholar
  121. Hughes JM, Stewart J, Lyle JM, McAllister J, Stocks JR, Suthers IM (2013) Latitudinal, ontogenetic and historical shifts in the diet of a carnivorous teleost, Arripis trutta (Bloch and Schneider, 1801), in a coastal pelagic ecosystem altered by climate change. Can J Fish Aquat Sci 70:1209–1230Google Scholar
  122. Huijbers CM, Schlacher TA, Schoeman DS, Weston MA, Connolly RM (2013) Urbanisation alters processing of marine carrion on sandy beaches. Landsc Urban Plan 119:1–8Google Scholar
  123. Hyndes GA, Lavery PS, Doropoulos C (2012) Dual processes for cross-boundary subsidies: incorporation of nutrients from reef-derived kelp into a seagrass ecosystem. Mar Ecol Prog Ser 445:97–107Google Scholar
  124. Hyndes GA, Nagelkerken I, McLeod RJ, Connolly RM, Lavery PS, Vanderklift MA (2014) Mechanisms and ecological role of carbon transfer within coastal seascapes. Biol Rev 89:232–254PubMedGoogle Scholar
  125. Igulu M, Nagelkerken I, van der Velde G, Mgaya Y (2013) Mangrove fish production is largely fuelled by external food sources: a stable isotope analysis of fishes at the individual, species, and community levels from across the globe. Ecosystems 16:1336–1352Google Scholar
  126. Ince R, Hyndes GA, Lavery PS, Vanderklift MA (2007) Marine macrophytes directly enhance abundances of sandy beach fauna through provision of food and habitat. Estuar Coast Shelf Sci 74:77–86Google Scholar
  127. Jackson JBC, Kirby MX, Berger WH, Bjorndal KA, Botsford LV et al (2001) Historical overfishing and the recent collapse of coastal ecosystems. Science 293:629–638PubMedGoogle Scholar
  128. Jenkins GP, May HMA, Wheatley MJ, Holloway MG (1997) Comparison of fish assemblages associated with seagrass and adjacent unvegetated habitats of Port Phillip Bay and Corner Inlet, Victoria, Australia, with emphasis on commercial species. Estuar Coast Shelf Res 44:569–588Google Scholar
  129. Jennings S, Reñones O, Morales-Nin B, Polunin NVC, Moranda J, Coll J (1997) Spatial variation in the δ15N and δ13C stable isotope composition of plants, invertebrates and fishes on Mediterranean reefs: implications for the study of trophic pathways. Mar Ecol Prog Ser 146:109–116Google Scholar
  130. Jepsen DB, Winemiller KO (2002) Structure of tropical river food webs revealed by stable isotope ratios. Oikos 96:46–55Google Scholar
  131. Jernakoff P (1987) Foraging patterns of juvenile western rock lobsters Panulirus cygnus George. J Exp Mar Biol Ecol 113:125–144Google Scholar
  132. Johansson CL, Bellwood DR, Depczynski M, Hoey AS (2013) The distribution of the sea urchin Echinometra mathaei (de Blainville) and its predators on Ningaloo Reef, Western Australia: the implications for top-down control in an intact reef system. J Exp Mar Biol Ecol 442:39–46Google Scholar
  133. Joll LM, Phillips BF (1984) Natural diet and growth of juvenile western rock lobsters Panulirus cygnus George. J Exp Mar Biol Ecol 75:145–169Google Scholar
  134. Jones G, Andrew N (1990) Herbivory and patch dynamics on rocky reefs in temperate Australasia: the roles of fish and sea urchins. Aust J Ecol 15:505–520Google Scholar
  135. Kerr EA, Strother S (1990) Seasonal changes in standing crop of Zostera muelleri in south-eastern Australia. Aquat Bot 38:369–376Google Scholar
  136. Kingsford M (2002) The distribution patterns of exploited girellid, kyphosid and sparid fishes on temperate rocky reefs in New South Wales, Australia. Fish Sci 68(Suppl 1):131Google Scholar
  137. Kirkman H, Kendrick GA (1997) Ecological significance and commercial harvesting of drifting and beachcast macroalgae and seagrasses in Australia: a review. J Appl Phycol 9:311–326Google Scholar
  138. Klumpp D, Nichols P (1983) A study of food chains in seagrass communities II. Food of the rock flathead, Platycephalus laevigatus Cuvier, a major predator in a Posidonia australis seagrass bed. Aust J Mar Freshw Res 34:745–754Google Scholar
  139. Klumpp DW, Howard RK, Pollard DA (1989) Trophodynamics and nutritional ecology of seagrass communities. In: Larkum AWD, McComb AJ, Shepherd SA (eds) Biology of seagrasses: a treatise on the biology of seagrasses with special reference to the Australian region. Elsevier, Amsterdam, pp 394–457Google Scholar
  140. Kneib RT (1997) The role of tidal marshes in the ecology of estuarine nekton. Oceanogr Mar Biol Annu Rev 35:163–220Google Scholar
  141. Kneib RT (2000) Salt marsh ecoscapes and production transfers by estuarine nekton in the southeastern United States. In: Weinstein MP, Kreeger DA (eds) Concepts and controversies in tidal marsh ecology. Kluwer, Dordrecht, pp 267–291Google Scholar
  142. Koehn JD, Hobday AJ, Pratchett MS, Gillanders BM (2011) Climate change and Australian marine and freshwater environments, fishes and fisheries: synthesis and options for adaptation. Mar Freshw Res 62:1148–1164Google Scholar
  143. Krumme U (2009) Diel and tidal movements by fish and decapods linking tropical coastal ecosystems. In: Nagelkerken I (ed) Ecological connectivity among tropical coastal ecosystems. Springer, Berlin, pp 271–324Google Scholar
  144. Kutt A (2007) Bird assemblage in a dune-mangrove mosaic, Cairns, Queensland. Aust Zool 34:158–164Google Scholar
  145. Laegdsgaard P, Johnson CR (1995) Mangrove habitats as nurseries: unique assemblages of juvenile fish in subtropical mangroves in eastern Australia. Mar Ecol Prog Ser 126:67–81Google Scholar
  146. Lanyon JM, Marsh H (1995) Temporal changes in the abundance of some tropical intertidal seagrasses in North Queensland. Aquat Bot 49:217–237Google Scholar
  147. Layman CA (2007) What can stable isotope ratio reveal about mangroves as fish habitat? Bull Mar Sci 80:513–527Google Scholar
  148. Layman CA, Allgeier JE, Rosemond AD, Dahlgren CP, Yeager LA (2011) Marine fisheries declines viewed upside down: human impacts on consumer-driven nutrient recycling. Ecol Appl 21:343–349PubMedGoogle Scholar
  149. Le Quesne WJF (2000) Nekton utilisation of intertidal estuarine marshes in the Knysna Estuary. Trans R Soc S Afr 55:205–214Google Scholar
  150. Lenanton RCJ (1982) Alternative non-estuarine nursery habitats for some commercially and recreationally important fish of south-western Australia. Aust J Mar Freshw Res 33:881Google Scholar
  151. Lenanton RCJ, Potter IC (1987) Contribution of estuaries to commercial fisheries in temperate Western Australia and the concept of estuarine dependence. Estuaries 10:28–35Google Scholar
  152. Lenanton RCJ, Robertson AI, Hansen JA (1982) Nearshore accumulations of detached macrophytes as nursery areas for fish. Mar Ecol Prog Ser 9:51–57Google Scholar
  153. Link JS (2002) Ecological considerations in fisheries management: when does it matter? Fisheries 27:10–17Google Scholar
  154. Link JS, Stockhausen WT, Methratta ET (2006) Food-web theory in marine ecosystems. In: Belgrano A, Scharler UM, Dunne J, Ulanowicz RE (eds) Aquatic food webs: an ecosystem approach. Oxford University Press, OxfordGoogle Scholar
  155. Linke TE, Platell ME, Potter IC (2001) Factors influencing the partitioning of food resources among six fish species in a large embayment with juxtaposing bare sand and seagrass habitats. J Exp Mar Biol Ecol 266:193–217Google Scholar
  156. Loneragan NR, Bunn SE (1999) River flows and estuarine ecosystems: implications for coastal fisheries from a review and a case study of the Logan River, southeast Queensland. Austral Ecol 24:431–440Google Scholar
  157. Loneragan NR, Bunn SE, Kellaway DM (1997) Are mangroves and seagrasses sources of organic carbon for penaeid prawns in a tropical Australian estuary? A multiple stable-isotope study. Mar Biol 130:289–300Google Scholar
  158. Lugendo BR, Nagelkerken I, Kruitwagen G, van der Velde G, Mgaya YD (2007) Relative importance of mangroves as feeding habitats for fishes: a comparison between mangrove habitats with different settings. Bull Mar Sci 80:497–512Google Scholar
  159. MacArthur LD, Phillips DL, Hyndes GA, Hanson CE, Vanderklift MA (2011) Habitat surrounding patch reefs influences the diet and nutrition of the western rock lobster. Mar Ecol Prog Ser 436:191–205Google Scholar
  160. MacIntyre HL, Geider RJ, Miller DC (1996) Microphytobenthos: the ecological role of the “secret garden” of unvegetated, shallow-water marine habitats. I. Distribution, abundance and primary production. Estuaries 19:186–201Google Scholar
  161. Manson FJ, Loneragan NR, Harch BD, Skilleter GA, Williams L (2005a) A broad-scale analysis of links between coastal fisheries production and mangrove extent: a case-study for northeastern Australia. Fish Res 74:69–85Google Scholar
  162. Manson FJ, Loneragan N, Skilleter G, Phinn S (2005b) An evaluation of the evidence for linkages between mangroves and fisheries: a synthesis of the literature and identification of research directions. Oceanogr Mar Biol Annu Rev 43:485–515Google Scholar
  163. Mazumder D, Saintilan N, Williams RJ (2006) Trophic relationships between itinerant fish and crab larvae in a temperate Australian saltmarsh. Mar Freshw Res 57:193–199Google Scholar
  164. Mazumder D, Saintilan N, Williams RJ, Szymczak R (2011) Trophic importance of a temperate intertidal wetland to resident and itinerant taxa: evidence from multiple stable isotope analyses. Mar Freshw Res 62:11–19Google Scholar
  165. McCann KS, Rasmussen JB, Umbanhowar J (2005) The dynamics of spatially coupled food webs. Ecol Lett 8:513–523PubMedGoogle Scholar
  166. McComb AJ, Humphries R (1992) Loss of nutrients from catchments and their ecological impacts in the Peel-Harvey estuarine system, Western Australia. Estuaries 15:529–537Google Scholar
  167. McKenzie LJ (1994) Seasonal changes in biomass and shoot characteristics of a Zostera capricorni Aschers. dominant meadow in Cairns Harbour, northern Queensland. Mar Freshw Res 45:1337–1352Google Scholar
  168. McLachlan A (1985) The biomass of macro- and interstitial fauna on clean and wrack-covered beaches in Western Australia. Estuar Coast Shelf Sci 21:587–599Google Scholar
  169. McLachlan A, Brown AC (2006) Ecology of sandy shores. Elsevier, AmsterdamGoogle Scholar
  170. McLachlan A, Hesp P (1984) Faunal response to morphology and water circulation of a sandy beach with cusps. Mar Ecol Prog Ser 19:133–144Google Scholar
  171. McTigue TA, Zimmerman RJ (1991) Carnivory vs herbivory in juvenile Penaeus setiferus (Linnaeus) and Penaeus aztecus (Ives). J Exp Mar Biol Ecol 151:1–16Google Scholar
  172. Melville AJ, Connolly RM (2003) Spatial analysis of stable isotope data to determine primary sources of nutrition for fish. Oecologia 136:499–507PubMedGoogle Scholar
  173. Melville AJ, Connolly RM (2005) Food webs supporting fish over subtropical mudflats are based on transported organic matter not in situ microalgae. Mar Biol 148:363–371Google Scholar
  174. Meynecke J-O, Lee SY, Duke NC, Warnken J (2006) Effect of rainfall as a component of climate change on estuarine fish production in Queensland, Australia. Estuar Coast Shelf Sci 69:491–504Google Scholar
  175. Meynecke J-O, Lee SY, Duke NC, Warnken J (2007) Relationships between estuarine habitats and coastal fisheries in Queensland, Australia. Bull Mar Sci 80:773–793Google Scholar
  176. Meynecke J-O, Lee SY, Duke NC (2008a) Linking spatial metrics and fish catch reveals the importance of coastal wetland connectivity to inshore fisheries in Queensland, Australia. Biol Conserv 141:981–996Google Scholar
  177. Meynecke J-O, Poole GC, Werry J, Lee SY (2008b) Use of PIT tag and underwater video recording in assessing estuarine fish movement in a high intertidal mangrove and salt marsh creek. Estuar Coast Shelf Sci 79:168–178Google Scholar
  178. Michael PJ, Hyndes GA, Vanderklift MA, Vergés A (2013) Identity and behavior of herbivorous fish influence large-scale spatial patterns of macroalgal herbivory in a coral reef. Mar Ecol Prog Ser 482:227–240Google Scholar
  179. Micheli F (1993) Feeding ecology of mangrove crabs in North Eastern Australia: mangrove litter consumption by Sesarma messa and Sesarma smithii. J Exp Mar Biol Ecol 171:165–186Google Scholar
  180. Middelburg JJ, Barranguet C, Boschker HTS, Herman PMJ, Moens T, Heip CHR (2000) The fate of intertidal microphytobenthos carbon: an in situ 13C-labeling study. Limnol Oceanogr 45:1224–1234Google Scholar
  181. Minello TJ, Zimmerman RJ, Martinez EX (1989) Mortality of young brown shrimp Penaeus aztecus in estuarine nurseries. Trans Am Fish Soc 118:693–708Google Scholar
  182. Minello TJ, Able KW, Weinstein MP, Hays CG (2003) Salt marshes as nurseries for nekton: testing hypotheses on density, growth and survival through meta-analysis. Mar Ecol Prog Ser 246:39–59Google Scholar
  183. Minello TJ, Matthews GA, Caldwell PA, Rozas LP (2008) Population and production estimates for decapod crustaceans in wetlands of Galveston Bay, Texas. Trans Am Fish Soc 137:129–146Google Scholar
  184. Minello TJ, Rozas LP, Baker R (2012) Geographic variability in salt marsh flooding patterns may affect nursery value for fishery species. Estuar Coasts 35:501–551Google Scholar
  185. Montgomery SS (1990) Movements of juvenile eastern king prawns, Penaeus plebejus, and identification of stock along the east coast of Australia. Fish Res 9:189–208Google Scholar
  186. Morton RM, Pollock BR, Beumer JP (1987) The occurrence and diet of fishes in a tidal inlet to a saltmarsh in southern Moreton Bay, Queensland. Aust J Ecol 12:217–237Google Scholar
  187. Nagelkerken I (2009) Ecological connectivity among tropical coastal ecosystems. Springer, BerlinGoogle Scholar
  188. Nagelkerken I, van der Velde G (2004) Are Caribbean mangroves important feeding grounds for juvenile reef fish from adjacent seagrass beds? Mar Ecol Prog Ser 274:143–151Google Scholar
  189. Nagelkerken I, Blaber SJM, Bouillon S, Green P, Haywood M, Kirton LG, Meynecke J-O, Pawlik J, Penrose HM, Sasekumar A, Somerfield PJ (2008) The habitat function of mangroves for terrestrial and marine fauna: a review. Aquat Bot 89:155–185Google Scholar
  190. Nagelkerken I, Sheaves M, Baker R, Connolly RM (2013) The seascape nursery: a novel spatial approach to identify and manage nurseries for coastal marine fauna. Fish Fish. doi: 10.1111/faf.12057 Google Scholar
  191. Nakano S, Miyasaka H, Kuhara N (1999) Terrestrial-aquatic linkages: riparian arthropod inputs alter trophic cascades in a stream food web. Ecology 80:2435–2441Google Scholar
  192. Nemerson DM, Able KW (2004) Spatial patterns in diet and distribution of juveniles of four fish species in Delaware Bay marsh creeks: factors influencing fish abundance. Mar Ecol Prog Ser 276:249–262Google Scholar
  193. Nemeth RS (2009) Dynamics of reef fish and decapod crustacean spawning aggregations: underlying mechanisms, habitat linkages and trophic interactions. In: Nagelkerken I (ed) Ecological connectivity among tropical coastal ecosystems. Springer, New York, pp 73–134Google Scholar
  194. Nichols PD, Klumpp DW, Johns RB (1986) Lipid components and utilization in consumers of a seagrass community: an indication of carbon source. Compar Biochem Physiol B 83:103–113Google Scholar
  195. Nixon SW (1980) Between coastal marshes and coastal water—a review of twenty years of speculation and research in the role of salt marshes in estuarine productivity and water chemistry. In: Hamilton P, MacDonald KB (eds) Wetland processes with emphasis on modeling. Plenum Press, New YorkGoogle Scholar
  196. Nyunja J, Ntiba M, Onyari J, Mavuti K, Soetaert K, Bouillon S (2009) Carbon sources supporting a diverse fish community in a tropical coastal ecosystem (Gazi Bay, Kenya). Estuar Coast Shelf Sci 83:333–341Google Scholar
  197. Oakes JM, Connolly RM, Revill AT (2010) Isotope enrichment in mangrove forests separates microphytobenthos and detritus as carbon sources for animals. Limnol Oceanogr 55:393–402Google Scholar
  198. Odum EP (1968) A research challenge: evaluating the productivity of coastal and estuarine water. In: Proceedings of the second sea grant conference, University of Rhode Island, pp 63–64Google Scholar
  199. Odum EP (2000) Tidal marshes as outwelling/pulsing ecosystems. In: Weinstein MP, Kreeger DA (eds) Concepts and controversies in tidal marsh ecology. Kluwer, Dordrecht, pp 3–7Google Scholar
  200. Odum W, Heald E (1975) The detritus based food web of an estuarine mangrove community. Bull Mar Sci 22:671–737Google Scholar
  201. Olds AD, Connolly RM, Pitt KA, Maxwell PS (2012) Habitat connectivity improves reserve performance. Conserv Lett 5:56–63Google Scholar
  202. Onuf CP, Teal JM, Valiela I (1977) Interactions of nutrients, plant growth and herbivory in a mangrove ecosystem. Ecology 58:514–526Google Scholar
  203. OzCoasts (2009) Australian Online Coastal Information. www.ozcoasts.org.au. Accessed 20 Oct 2013
  204. Palmer C, Woinarski JCZ (1999) Seasonal roosts and foraging movements of the black flying fox (Pteropus alecto) in the Northern Territory: resource tracking in a landscape mosaic. Wildl Res 26:823–838Google Scholar
  205. Pasquaud S, Lobry J, Elie P (2007) Facing the necessity of describing estuarine systems: a review of food web ecology study techniques. Hydrobiologia 588:159–172Google Scholar
  206. Pimm SL, Lawton JH (1980) Are food webs divided into compartments? J Anim Ecol 49:879–898Google Scholar
  207. Pinnegar JK, Polunin NVC, Francour P, Badalamenti F, Chemello R et al (2000) Trophic cascades in benthic marine ecosystems: lessons for fisheries and protected-area management. Environ Conserv 27:179–200Google Scholar
  208. Polis GA (1999) Why are parts of the world green? Multiple factors control productivity and the distribution of biomass. Oikos 86:3–15Google Scholar
  209. Polis GA, Anderson WB, Holt RD (1997) Towards an integration of landscape and food web ecology: the dynamics of spatially subsidized food webs. Annu Rev Ecol Syst 28:289–316Google Scholar
  210. Poloczanska ES, Babcock RC, Butler A, Hobday AJ, Milton DA et al (2007) Climate change and Australian marine life. Oceanogr Mar Biol 45:407–478Google Scholar
  211. Pratchett MS, Gust N, Goby G, Klanten SO (2001) Consumption of coral propagules represent a signifcant trophic link between corals and reef fish. Coral Reefs 20:13–17Google Scholar
  212. Preen AR, Lee Long WJ, Coles RG (1995) Flood and cyclone related loss, and partial recovery, of more than 1000 km2 of seagrass in Hervey Bay, Queensland, Australia. Aquat Bot 52:3–17Google Scholar
  213. Raubenheimer D, Zemke-White WL, Phillips RJ, Clements KD (2005) Algal macronutrients and food selection by the omnivorous marine fish Girella tricuspidata. Ecology 86:2601–2610Google Scholar
  214. Rezende EL, Albert EA, Fortuna MA, Bascompte J (2009) Compartments in a marine food web associated with phylogeny, body mass, and habitat structure. Ecol Lett 12:779–788PubMedGoogle Scholar
  215. Riera P, Montagna PA, Kalke RD, Richard P (2000) Utilization of estuarine organic matter during growth and migration by juvenile brown shrimp Penaeus aztecus in a South Texas estuary. Mar Ecol Prog Ser 199:205–216Google Scholar
  216. Robertson AI (1984) Trophic interactions between the fish fauna and macrobenthos of an eelgrass community in Western Port, Victoria. Aquat Bot 18:135–153Google Scholar
  217. Robertson AI (1988) Abundance, diet and predators of juvenile banana prawns, Penaeus merguiensis, in a tropical mangrove estuary. Aust J Mar Freshw Res 39:467–478Google Scholar
  218. Robertson AI, Daniel PA (1989) The influence of crabs on litter processing in high intertidal mangrove forests in tropical Australia. Oecologia 78:191–198Google Scholar
  219. Robertson AI, Duke NC (1987) Mangroves as nursery sites: comparisons of the abundance and species composition of fish and crustaceans in mangroves and other nearshore habitats in tropical Australia. Mar Biol 96:193–205Google Scholar
  220. Robertson AI, Duke NC (1990) Recruitment, growth and residence time of fishes in a tropical Australian mangrove system. Estuar Coast Shelf Sci 31:723–743Google Scholar
  221. Robertson AI, Lenanton RCJ (1984) Fish community structure and food chain dynamics in the surf-zone of sandy beaches: the role of detached macrophyte detritus. J Exp Mar Biol Ecol 84:265–283Google Scholar
  222. Robins JB, Halliday IA, Staunton-Smith J, Mayer DG, Sellin MJ (2005) Freshwater-flow requirements of estuarine fisheries in tropical Australia: a review of the state of knowledge and application of a suggested approach. Mar Freshw Res 56:343–360Google Scholar
  223. Ruello NV (1975) Geographical distribution, growth and breeding migration of the Eastern Australian king prawn Penaeus plebejus Hess. Aust J Mar Freshw Res 26:343–354Google Scholar
  224. Russell DJ, Garrett RN (1983) Use by juvenile barramundi, Lates calcarifer (Bloch), and other fishes of temporal supralittoral habitats in a tropical estuary in Northern Australia. Aust J Mar Freshw Res 34:805–811Google Scholar
  225. Russell DJ, Garrett RN (1988) Movements of juvenile barramundi, Lates calcarifer (Bloch), in north-eastern Queensland. Aust J Mar Freshw Res 39:117–123Google Scholar
  226. Sadovy de Mitcheson Y, Cornish A, Domeier M et al (2008) A global baseline for spawning aggregations of reef fishes. Conserv Biol 22:1233–1244PubMedGoogle Scholar
  227. Saintilan N, Hossain K, Mazumder D (2007) Linkages between seagrass, mangrove and saltmarsh as fish habitat in the Botany Bay estuary, New South Wales. Wetl Ecol Manag 15:277–286Google Scholar
  228. Salini JP, Blaber SJM, Brewer DT (1990) Diets of piscivorous fishes in a tropical Australian estuary, with special reference to predation on penaeid prawns. Mar Biol 105:363–374Google Scholar
  229. Salini JP, Blaber SJM, Brewer DT (1994) Diets of trawled predatory fish of the Gulf of Carpentaria, Australia, with particular reference to predation on prawns. Aust J Mar Freshw Res 45:397–441Google Scholar
  230. Scharf FS, Schlicht KK (2000) Feeding habits of red drum Sciaenops ocellatus in Galveston Bay, Texas: seasonal diet variation and predator-prey size relationships. Estuaries 23:128–139Google Scholar
  231. Scheffer M, Carpenter S, de Young B (2005) Cascading effects of overfishing marine systems. Trends Ecol Evol 20:579–581PubMedGoogle Scholar
  232. Schlacher TA, Connolly RM (2009) Land-ocean coupling of carbon and nitrogen fluxes on sandy beaches. Ecosystems 12:311–321Google Scholar
  233. Schlacher TA, Skillington AJ, Connolly RM, Robinson W, Gaston TF (2008) Coupling between marine plankton and freshwater flow in the plumes off a small estuary. Int Rev Hydrobiol 93:641–658Google Scholar
  234. Schlacher TA, Connolly RM, Skillington AJ, Gaston TF (2009) Can export of organic matter from estuaries support zooplankton in nearshore, marine plumes? Aquat Ecol 43:383–393Google Scholar
  235. Shahraki M, Fry B, Krumme U, Rixen T (2014) Microphytobenthos sustain fish food webs in intertidal arid habitats: a comparison between mangrove-lined and un-vegetated creeks in the Persian Gulf. Estuar Coast Shelf Sci 149:203–212Google Scholar
  236. Sheaves M (1995) Large lutjanid and serranid fishes in tropical estuaries: are they adults or juveniles? Mar Ecol Prog Ser 129:31–40Google Scholar
  237. Sheaves M (2009) Consequences of ecological connectivity: the coastal ecosystem mosaic. Mar Ecol Prog Ser 391:107–115Google Scholar
  238. Sheaves M, Johnston R (2008) Influence of marine and freshwater connectivity on the dynamics of subtropical estuarine wetland fish metapopulations. Mar Ecol Prog Ser 357:225–243Google Scholar
  239. Sheaves M, Molony B (2000) Short-circuit in the mangrove food chain. Mar Ecol Prog Ser 199:97–109Google Scholar
  240. Sheaves M, Johnston R, Abrantes K (2007) Fish fauna of dry tropical and subtropical estuarine floodplain wetlands. Mar Freshw Res 58:931–993Google Scholar
  241. Sheaves M, Johnston R, Connolly R, Baker R (2012) Importance of estuarine mangroves to juvenile banana prawns. Estuar Coast Shelf Sci 114:208–219Google Scholar
  242. Sheaves M, Sheaves J, Stegemann K, Molony B (2014) Resource partitioning and habitat-specific dietary plasticity of two estuarine sparid fishes increase food web complexity. Mar Freshw Res 65:114–123Google Scholar
  243. Sheaves M, Baker R, Nagelkerken I, Connolly RM (2015) True value of estuarine and coastal nurseries for fish: incorporating complexity and dynamics. Estuar Coasts 38:401–414Google Scholar
  244. Sherwood GD, Rose GA (2005) Stable isotope analysis of some representative fish and invertebrates of the Newfoundland and Labrador continental shelf food web. Estuar Coast Shelf Sci 63:537–549Google Scholar
  245. Short AD (2006) Australian beach systems-nature and distribution. J Coast Res 22:11–27Google Scholar
  246. Smith KA, Suthers IM (2000) Consistent timing of juvenile fish recruitment to seagrass beds within two Sydney estuaries. Mar Freshw Res 51:765–776Google Scholar
  247. Sogard S (1992) Variability in growth rates of juvenile fishes in different estuarine habitats. Mar Ecol Prog Ser 85:35–53Google Scholar
  248. Somers IF, Crocos PJ, Hill BJ (1987) Distribution and abundance of the tiger prawns Penaeus esculentus and P. semisulcatus in the north-western Gulf of Carpentaria, Australia. Aust J Mar Freshw Res 38:63–78Google Scholar
  249. Speed CW, Meekan MG, Field IC, McMahon CR, Abrantes K, Bradshaw CJA (2012) Trophic ecology of reef sharks determined using stable isotopes and telemetry. Coral Reefs 31:357–367Google Scholar
  250. Spencer J, Monamy V, Breitfuss M (2009) Saltmarsh as habitat for birds and other vertebrates. In: Saintilan N (ed) Australian saltmarsh ecology, vol 7. CSIRO Publishing, Melbourne, pp 143–159Google Scholar
  251. St John J (1999) Ontogenetic changes in the diet of the coral reef grouper Plectropomus leopardus (Serranidae): patterns in taxa, size and habitat of prey. Mar Ecol Prog Ser 180:233–246Google Scholar
  252. Steneck RS, Graham MH, Bourque BJ, Corbett D, Erlandson JM, Estes JA, Tegner MJ (2002) Kelp forest ecosystems: biodiversity, stability, resilience and future. Environ Conserv 29:436–459Google Scholar
  253. Stouffer DB, Bascompte J (2011) Compartmentalization increases food-web persistence. Proc Nat Acad Sci 108:3648–3652PubMedCentralPubMedGoogle Scholar
  254. Sullivan MJ, Moncreiff CA (1990) Edaphic algae are an important component of salt marsh food-webs: evidence from multiple stable isotope analyses. Mar Ecol Prog Ser 62:149–159Google Scholar
  255. Svensson CJ, Hyndes GA, Lavery PS (2007) Food web analysis in two permanently open temperate estuaries: consequences of saltmarsh loss? Mar Environ Res 64:286–304PubMedGoogle Scholar
  256. Swain DP, Sinclair AF (2000) Pelagic fishes and the cod recruitment dilemma in the Northwest Atlantic. Can J Fish Aquat Sci 57:1321–1325Google Scholar
  257. Teal JM (1962) Energy flow in the salt marsh ecosystem of Georgia. Ecology 43:614–624Google Scholar
  258. Thomas BE, Connolly RM (2001) Fish use of subtropical saltmarshes in Queensland, Australia: relationships with vegetation, water depth and distance onto the marsh. Mar Ecol Prog Ser 209:175–288Google Scholar
  259. Thresher RE, Nichols PD, Gunn JS, Bruce BD, Furnali DM (1992) Seagrass detritus as the basis of a coastal planktonic food chain. Limnol Oceanogr 37:1754–1758Google Scholar
  260. Tibbetts IR, Carseldine L (2005) Trophic shifts in three subtropical Australian halfbeaks (Teleostei: Hemiramphidae). Mar Freshw Res 56:925–932Google Scholar
  261. Tracey S, Lyle J (2011) Linking scallop distribution and abundance with fisher behaviour: implication for management to avoid repeated stock collapse in a recreational fishery. Fish Manag Ecol 18:221–232Google Scholar
  262. Travers MJ, Potter IC (2002) Factors influencing the characteristics of fish assemblages in a large subtropical marine embayment. J Fish Biol 2002:764–784Google Scholar
  263. Tupper M (2007) Identification of nursery habitats for commercially valuable humphead wrasse Chelinus undulates and large groupers (Pisces: Serranidae) in Palau. Mar Ecol Prog Ser 332:189–199Google Scholar
  264. Turner RE (1977) Intertidal vegetation and commercial yields of penaeid shrimp. Trans Am Fish Soc 106:411–416Google Scholar
  265. Valentine JF, Duffy JE (2006) The central role of grazing in seagrass ecology. In: Larkum WDA, Orth RJ, Duarte CM (eds) Seagrasses: biology, ecology and conservation. Springer, DordrechtGoogle Scholar
  266. Vance DJ, Haywood MDE, Staples DJ (1990) Use of a mangrove estuary as a nursery area by postlarval and juvenile banana prawns, Penaeus merguiensis de Mann, in northern Australia. Estuar Coast Shelf Sci 31:689–701Google Scholar
  267. Vander Zanden MJ, Fetzer WW (2007) Global patterns of aquatic food chain length. Oikos 116:1378–1388Google Scholar
  268. Vander Zanden MJ, Shuter BJ, Lester N, Rasmussen JB (1999) Patterns of food chain length in lakes: a stable isotope study. Am Nat 154:406–416PubMedGoogle Scholar
  269. Vanderklift MA, Wernberg T (2008) Detached kelps from distant sources are a food subsidy for sea urchins. Oecologia 157:327–335PubMedGoogle Scholar
  270. Vasconcelos RP, Reis-Santos P, Costa MJ, Cabral HN (2011) Connectivity between estuaries and marine environment: integrating metrics to assess estuarine nursery function. Ecol Indic 11:1123–1133Google Scholar
  271. Vasconcelos RP, Eggleston DB, LePape O, Tulp I (2014) Patterns and process of habitat-specific demographic variability in exploited marine species. ICES J Mar Sci 71:638–647Google Scholar
  272. Vaslet A, Phillips DL, France C, Feller IC, Baldwin CC (2012) The relative importance of mangroves and seagrass beds as feeding areas for resident and transient fishes among different mangrove habitats in Florida and Belize: evidence from dietary and stable-isotope analyses. J Exp Mar Biol Ecol 434–435:81–93Google Scholar
  273. Verweij MC, Nagelkerken I (2007) Short and long-term movement and site fidelity of juvenile Haemulidae in back-reef habitats of a Caribbean embayment. Hydrobiologia 592:257–270Google Scholar
  274. Verweij MC, Nagelkerken I, Wartenbergh SL, Pen IR, van der Velde G (2006) Caribbean mangroves and seagrass beds as daytime feeding habitats for juvenile French grunts, Haemulon flavolineatum. Mar Biol 149:1291–1299Google Scholar
  275. Vinagre C, Salgado J, Cabral HN, Costa MJ (2011) Food web structure and habitat connectivity in fish estuarine nurseries—impact of river flow. Estuar Coasts 34:663–674Google Scholar
  276. Walters C, Martell SJD, Christensen V, Mahmoudi B (2008) An ecosim model for exploring Gulf of Mexico ecosystem management options: implications of including multistanza life-history models for policy predictions. Bull Mar Sci 83:251–271Google Scholar
  277. Waycott M, Longstaff BJ, Mellors J (2005) Seagrass population dynamics and water quality in the Great Barrier Reef region: a review and future research directions. Mar Poll Bull 51:343–350Google Scholar
  278. Waycott M, Duarte CM, Carruthers TJB, Orth RJ, Dennison WC et al (2009) Accelerating loss of seagrasses across the globe threatens coastal ecosystems. Proc Natl Acad Sci 106:12377–12381PubMedCentralPubMedGoogle Scholar
  279. Weinstein MP, Kreeger DA (eds) (2000) Concepts and controversies in tidal marsh ecology. Kluwer, DordrechtGoogle Scholar
  280. Wernberg T, Vanderklift MA, How J, Lavery PS (2006) Export of detached macroalgae from reefs to adjacent seagrass beds. Oecologia 147:692–701PubMedGoogle Scholar
  281. Westera M, Lavery P, Hyndes G (2003) Differences in recreationally targeted fishes between protected and fished areas of a coral reef marine park. J Exp Mar Biol Ecol 294:145–168Google Scholar
  282. Westneat M, Resing J (1988) Predation on coral spawn by planktivorous fish. Coral Reefs 7:89–92Google Scholar
  283. Wild C, Jantzen C, Struck U, Hoegh-Guldberg O, Huettel M (2008) Biogeochemical responses following coral mass spawning on the Great Barrier Reef: pelagic-benthic coupling. Coral Reefs 27:123–132Google Scholar
  284. Winemiller KO, Akin S, Zeug SC (2007) Production sources and food web structure of a temperate tidal estuary: integration of dietary and stable isotope data. Mar Ecol Prog Ser 343:63–76Google Scholar
  285. Wolanski E, Burrage D, King B (1989) Trapping and dispersion of coral eggs around Bowden Reef, Great Barrier Reef, following mass coral spawning. Cont Shelf Res 9:479–496Google Scholar
  286. Worm B, Barbier EB, Beaumont N, Duffy JE, Folke C, Halpern BS, Jackson JBC, Lotze HK, Micheli F, Palumbi SR, Sala E, Selkoe KA, Stachowicz JJ, Watson R (2006) Impacts of biodiversity loss on ocean ecosystem services. Science 314:787–790PubMedGoogle Scholar
  287. Wyatt ASJ, Waite AM, Humphries S (2012) Stable isotope analysis reveals community-level variation in fish trophodynamics across a fringing coral reef. Coral Reefs 31:1029–1044Google Scholar
  288. Yick JL, Barnett A, Tracey SR (2012) The trophic ecology of two abundant mesopredators in south-east coastal waters of Tasmania, Australia. Mar Biol 159:1183–1196Google Scholar
  289. Yoshino K, Tsugeki NK, Amano Y, Hayami Y, Hamaoka H, Omori K (2012) Intertidal bare mudflats subsidize subtidal production through outwelling of benthic microalgae. Estuar Coast Shelf Sci 109:138–143Google Scholar
  290. Young CM (1990) Larval predation by epifauna on temperate reefs: scale, power and the scarcity of measurable effects. Aust J Ecol 15:413–426Google Scholar
  291. Zagars M, Ikejima K, Kasai A, Arai N, Tongnunui P (2013) Trophic characteristics of a mangrove fish community in Southwest Thailand: important mangrove contribution and intraspecies feeding variability. Estuar Coast Shelf Sci 119:145–152Google Scholar

Copyright information

© Springer International Publishing Switzerland 2015

Authors and Affiliations

  • Kátya G. Abrantes
    • 1
    • 2
    Email author
  • Adam Barnett
    • 1
    • 2
  • Ronald Baker
    • 1
    • 2
    • 3
  • Marcus Sheaves
    • 1
    • 2
  1. 1.College of Marine and Environmental SciencesJames Cook UniversityTownsvilleAustralia
  2. 2.Centre for Tropical Water and Aquatic Ecosystem Research (TropWATER)James Cook UniversityTownsvilleAustralia
  3. 3.CSIROTownsvilleAustralia

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