Plant and Soil

, Volume 343, Issue 1–2, pp 139–160 | Cite as

Simulating soil N2O emissions and heterotrophic CO2 respiration in arable systems using FASSET and MoBiLE-DNDC

  • Ngonidzashe Chirinda
  • Daniela Kracher
  • Mette Lægdsmand
  • John R. Porter
  • Jørgen E. Olesen
  • Bjørn M. Petersen
  • Jordi Doltra
  • Ralf Kiese
  • Klaus Butterbach-Bahl
Regular Article

Abstract

Modelling of soil emissions of nitrous oxide (N2O) and carbon dioxide (CO2) is complicated by complex interactions between processes and factors influencing their production, consumption and transport. In this study N2O emissions and heterotrophic CO2 respiration were simulated from soils under winter wheat grown in three different organic and one inorganic fertilizer-based cropping system using two different models, i.e., MoBiLE-DNDC and FASSET. The two models were generally capable of simulating most seasonal trends of measured soil heterotrophic CO2 respiration and N2O emissions. Annual soil heterotrophic CO2 respiration was underestimated by both models in all systems (about 10–30% by FASSET and 10–40% by MoBiLE-DNDC). Both models overestimated annual N2O emissions in all systems (about 10–580% by FASSET and 20–50% by MoBiLE-DNDC). In addition, both models had some problems in simulating soil mineral nitrogen, which seemed to originate from deficiencies in simulating degradation of soil organic matter, incorporated residues of catch crops and organic fertilizers. To improve the performance of the models, organic matter decomposition parameters need to be revised.

Keywords

Catch crop Greenhouse gas emissions Organic farming Manure Mineral fertilizer Modelling Winter wheat 

References

  1. Abdalla M, Wattenbach M, Smith P, Ambus P, Jones M, Williams M (2009) Application of the DNDC model to predict emissions of N2O from Irish agriculture. Geoderma 151:327–337CrossRefGoogle Scholar
  2. Ambus P, Christensen S (1995) Spatial and seasonal nitrous oxide and methane fluxes in Danish forest-, grassland-, and agroecosystems. J Environ Qual 24:993–1001CrossRefGoogle Scholar
  3. Beheydt D, Boeckx P, Sleutel S, Li C, Cleemput OV (2007) Validation of DNDC for 22 long-term N2O field emission measurements. Atmos Environ 41:6196–6211CrossRefGoogle Scholar
  4. Berntsen J, Jacobsen BH, Olesen JE, Petersen BM, Hutchings NJ (2003) Evaluating nitrogen taxation scenarios using the dynamic whole farm simulation model FASSET. Agric Syst 76:817–839CrossRefGoogle Scholar
  5. Berry PM, Sylvester-Bradley R, Philipps L, Hatch DJ, Cuttle SP, Rayans FW, Gosling P (2002) Is the productivity of organic farms restricted by the supply of available nitrogen. Soil Use Manage 18:248–255CrossRefGoogle Scholar
  6. Bertora C, Alluvione F, Zavattaro L, van Groenigen JW, Velthof G, Grignani C (2008) Pig slurry treatment modifies slurry composition, N2O, and CO2 emissions after soil incorporation. Soil Biol Biochem 40:1999–2006CrossRefGoogle Scholar
  7. Bolinder MA, Angers DA, Dubuc JP (1997) Estimating shoot root ratios and annual carbon inputs in soils for cereal crops. Agric Ecosyst Environ 63:61–66CrossRefGoogle Scholar
  8. Børgesen CD, Iversen BV, Jacobsen OH, Schaap MG (2008) Pedotransfer functions estimating soil hydraulic properties using different soil parameters. Hydrol Process 22:1630–1639CrossRefGoogle Scholar
  9. Bouwman AF, Boumans LJM, Batjes NH (2002) Modelling global annual N2O and NO emissions from fertilized fields. Glob Biogeochem Cycles 16:1080. doi:10.1029/2001GB001812 CrossRefGoogle Scholar
  10. Breland TA (1994) Enhanced mineralization and denitrification as a result or heterogeneous distribution of clover residues in soil. Plant Soil 166:1–12CrossRefGoogle Scholar
  11. Butterbach-Bahl K, Kahl M, Mykhyliv L, Werner C, Li C (2009) A European-wide inventory of soil NO emissions using the biogeochemical models DNDC/Forest-DNDC. Atmos Environ 43:1392–1402CrossRefGoogle Scholar
  12. Cassman KG, Dobermann A, Walters DT (2002) Agroecosystems, nitrogen-use efficiency, and nitrogen management. Ambio 31:132–140PubMedGoogle Scholar
  13. Chapuis-Lardy L, Wrange N, Metay A, Chotte JL, Bernoux M (2007) Soils, a sink for N2O? A review. Glob Chang Biol 13:1–17CrossRefGoogle Scholar
  14. Chatskikh D, Olesen JE (2007) Soil tillage enhanced CO2 and N2O emissions from loamy sand soil under spring barley. Soil Tillage Res 97:5–18CrossRefGoogle Scholar
  15. Chatskikh D, Olesen JE, Berntsen J, Regina K, Yamulki S (2005) Simulation of effects of soils, climate and management on N2O emission from grasslands. Biogeochemistry 76:395–419CrossRefGoogle Scholar
  16. Chatskikh D, Olesen JE, Hansen EM, Elsgaard L, Petersen BM (2008) Effects of reduced tillage on net greenhouse gas fluxes from loamy sand soil under winter crops in Denmark. Agric Ecosyst Environ 128:117–126CrossRefGoogle Scholar
  17. Chen DC, Li Y, Grace P, Mosier AR (2008) N2O emissions from agricultural lands: a synthesis of simulation approaches. Plant Soil 309:169–189CrossRefGoogle Scholar
  18. Chirinda N, Carter MS, Kristian KR, Ambus P, Olesen JE, Porter JR, Petersen SO (2010) Emissions of nitrous oxide from arable organic and conventional cropping systems on two soil types. Agric Ecosyst Environ 136:199–208CrossRefGoogle Scholar
  19. Davidson EA, Janssens IA (2006) Temperature sensitivity of soil carbon decomposition and feedbacks to climate change. Nature 440:165–173PubMedCrossRefGoogle Scholar
  20. de Bruijn AMG, Butterbach-Bahl K, Blagodatsky S, Grote R (2009) Model evaluation of different mechanisms driving free-thaw N2O emissions. Agric Ecosyst Environ 133:196–207CrossRefGoogle Scholar
  21. Del Grosso SJ, Mosier AR, Parton WJ, Ojima DS (2005) DAYCENT model analysis of past and contemporary soil N2O and net greenhouse gas flux for major crops in the USA. Soil Tillage Res 83:9–24CrossRefGoogle Scholar
  22. Ding WL, Meng L, Yin Y, Cai Z, Zheng X (2007) CO2 emission in an intensively cultivated loam as affected by long term application of organic manure and N fertilizer. Soil Biol Biochem 39:669–679CrossRefGoogle Scholar
  23. Djurhuus J, Olesen JE (2000) Characterisation of four sites in Denmark for long-term experiments on crop rotations for organic farming. DIAS Report Plant Production No. 33Google Scholar
  24. Dobbie KE, McTaggart IP, Smith KA (1999) Nitrous oxide emissions from intensive agricultural systems: variations between crops and seasons, key driving variables, and mean emission factors. J Geophys Res 104:26891–26899CrossRefGoogle Scholar
  25. Dou Z, Fox RH, Toth JD (1994) Tillage effect on seasonal nitrogen availability in corn supplied with legume green manures. Plant Soil 162:203–210CrossRefGoogle Scholar
  26. Eckersten H, Torssell B, Kornher A, Bostrom U (2007) Modelling biomass, water and nitrogen in grass ley: estimation of N uptake parameters. Eur J Agron 27:89–101CrossRefGoogle Scholar
  27. Farquharson R, Baldock J (2008) Concepts in modelling N2O emissions from land use. Plant Soil 309:147–167CrossRefGoogle Scholar
  28. Firestone MK, Davidson EA (1989) Microbiological basis of NO and N2O production and consumption in soil. WileyGoogle Scholar
  29. Frolking SE, Moiser AR, Ojima DS, Li C, Parton WJ, Potter CS, Priesack E, Stenger R, Haberbosch C, Dorsch P, Flessa H, Smith KA (1998) Comparison of N2O emissions from soils at three temperate agricultural sites: simulations of year-round measurements by four models. Nutr Cycl Agroecosyst 52:77–105CrossRefGoogle Scholar
  30. Giltrap DL, Saggar S, Singh J (2008) Measured and modelled carbon dioxide fluxes from a grazed dairy pasture. In: Currie LD, Yates LJ (eds) Carbon and nutrient management in agriculture. Occasional Report No. 21. Fertilizer and Lime Research Centre, Massey University, Palmerston North, New Zealand, pp 376–381Google Scholar
  31. Giltrap DL, Li C, Saggar S (2010) DNDC: a process-based model of greenhouse gas fluxes from agricultural soils. Agric Ecosyst Environ 136:292–300CrossRefGoogle Scholar
  32. Gregory PJ (2006) Plant roots: their growth activity and interaction with soils. Blackwell, UK, pp 45–79Google Scholar
  33. Groffman PM, Tiedje JM, Robertson GP, Christensen S (1987) Denitrification at different temporal and geographical scales: Proximal and distal controls. In: Wilson JR (ed) Advances in nitrogen cycling in agricultural ecosystems. CAB International, Wallingford, pp 174–192Google Scholar
  34. Grote R, Lehmann E, Brummer C, Bruggemann N, Szarzynski J, Kunstmann H (2009) Modelling and observation of biospher-atmoshpere interactions in natural savannah in Burkina Faso, West Africa. Phys Chem Earth 34:251–260Google Scholar
  35. Hadas A, Agassi H, Zhevelev L, Kautsky GJ, Levy E, Fizik E, Gotessman M (2004a) Mulching with composted municipal solid wastes in the Central Negev, Israel. II. Effect on available nitrogen and phosphorus and on organic matter in soil. Soil Tillage Res 78:115–128CrossRefGoogle Scholar
  36. Hadas A, Kautsky L, Goek M, Kara EE (2004b) Rates of decomposition of plant residues and available nitrogen in soil, related to residue composition through simulation of carbon and nitrogen turnover. Soil Biol Biochem 36:255–266CrossRefGoogle Scholar
  37. Hansen B (1989) Determination of nitrogen as elementary N, an alternative to Kjeldahl. Acta Agric Scand B Soil Plant Sci 39:113–118Google Scholar
  38. Heinemeyer A, Hartley IP, Evans SP, Carreira de la Fuente JA, Ineson P (2007) Forest soil CO2 flux: uncovering the contribution and environmental responses of ectomycorrhizas. Global Chang Biol 13:1786–1797CrossRefGoogle Scholar
  39. Hutchings NJ, Olesen JE, Petersen BM, Berntsen J (2007) Modelling spatial heterogeneity in grazed grassland and its effects in nitrogen cycling and greenhouse gas emissions. Agric Ecosyst Environ 121:153–163CrossRefGoogle Scholar
  40. IPCC (2007) The physical science basis. In: Solomon S, Qin D, Manning M, Chen Z, Marquis M, Averyt KB, Tignor M, Miller HL (eds) Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change. Cambridge University Press, CambridgeGoogle Scholar
  41. Jarecki MK, Parkin TB, Chan ASK, Kaspar TC, Moorman TB, Singer JW, Kerr BJ, Hatfield JL, Jones R (2009) Cover crop effects on nitrous oxide emission from a manure-treated Mollisol. Agric Ecosyst Environ 134:29–35CrossRefGoogle Scholar
  42. Johnson JMF, Weyers FAJ, LS RDC (2007) Agricultural opportunities to mitigate greenhouse gas emissions. Environ Pollut 150:107–124PubMedCrossRefGoogle Scholar
  43. Jones SK, Rees RM, Skiba UM, Ball BC (2005) Greenhouse gas emissions from a managed grassland. Glob Planet Change 47:201–211CrossRefGoogle Scholar
  44. Keeney DR, Nelson DW (1982) Nitrogen-inorganic forms. In: Page AL et al (eds) Methods of soil analysis. Part 2. Agronomy monographs 9, 2nd edn. American Society of Agronomy and Soil Science of America, Madison, pp 643–693Google Scholar
  45. Kesik M, Ambus P, Baritz R, Brüggeman N, Butterbach-Bahl K, Damm M, Duyzer J, Horvath L, Kiese R, Kitzler B, Leip A, Li C, Pihlatie M, Pilegaard K, Seufert G, Simpson D, Skiba U, Smiatek G, Vesala T, Zechmeister-Boltenstern S (2005) Inventories of N2O and NO emissions from European forest soils. Biogeosciences 2:353–375CrossRefGoogle Scholar
  46. Khan SA, Mulvaney RL, Ellsworth TR, Boast CW (2007) The myth of nitrogen fertilization for soil carbon sequestration. J Environ Qual 36:1821–1832PubMedCrossRefGoogle Scholar
  47. Kiese R, Li C, Hilbert DW, Papen H, Butterbach-Bahl K (2005) Regional application of PnET-N-DNDC for estimating the N2O source strength of tropical rainforests in the wet tropics of Australia. Glob Chang Biol 11:128–144CrossRefGoogle Scholar
  48. Koga N, Tsuruta H, Sawamoto T, Nishimura S, Yagi K (2004) N2O emission and CH4 uptake in arable fields managed under conventional and reduced tillage cropping systems in northern Japan. Glob Biogeochem Cycles 18:GB4025. doi:10.1029/2004GB002260 CrossRefGoogle Scholar
  49. Kroeze C, Mosier A, Bouwman L (1999) Closing the global N2O budget: a retrospective analysis 1500–1994. Glob Biogeochem Cycles 13:1–8CrossRefGoogle Scholar
  50. Li C, Frolking S, Frolking TA (1992) A model of nitrous oxide evolution from soil driven by rainfall events: 1. Model structure and sensitivity. J Geophys Res 97(D9):9759–9776Google Scholar
  51. Li C, Aber J, Stange F, Butterbach-Bahl K, Papen H (2000) A process-oriented model of N2O and NO emissions from forest soils: 1. Model development. J Geophys Res 105:4369–4384CrossRefGoogle Scholar
  52. Li C, Xiao X, Frolking S, Moore B, Salas W, Qiu J, Zhang Y, Zhuang Y, Wang X (2003) Greenhouse gas emissions from croplands of China. Quat Sci 23:493–503Google Scholar
  53. Luo Y, Zhou X (2006) Soil respiration and the environment. Academic, USA, p 21Google Scholar
  54. Magid J, Henriksen O, Thorup-Kristensen K, Mueller T (2001) Disproportionately high N-mineralisation rates from green manures at low temperatures-implications for modelling and management in cool temperate agro-ecosystems. Plant Soil 228:73–82CrossRefGoogle Scholar
  55. Marschner B, Kalbitz K (2003) Controls of bioavailability and biodegradability of dissolved organic matter in soils. Geoderma 113:211–235CrossRefGoogle Scholar
  56. Matejovic I (1997) Determination of carbon and nitrogen in samples of various soils by dry combustion. Commun Soil Sci Plant Anal 28:1499–1511CrossRefGoogle Scholar
  57. Olesen JE, Askegaard M, Rasmussen IA (2000) Design of an organic farming crop-rotation experiment. Acta Agric Scand B Soil Plant Sci 50:13–21Google Scholar
  58. Olesen JE, Petersen BM, Berntsen J, Hansen S, Jamieson PD, Thomsen AG (2002a) Comparison of methods for simulating effects of nitrogen on green area index and dry matter growth in winter wheat. Field Crops Res 74:131–149CrossRefGoogle Scholar
  59. Olesen JE, Berntsen J, Hansen EM, Petersen BM, Petersen J (2002b) Crop nitrogen demand and canopy area expansion in winter wheat during vegetative growth. Eur J Agron 16:279–296CrossRefGoogle Scholar
  60. Olesen JE, Hansen EM, Askegaard M, Rasmussen IA (2007) The value of catch crops and organic manures for spring barley in organic arable farming. Field Crops Res 100:168–178CrossRefGoogle Scholar
  61. Olesen JE, Askegaard M, Rasmussen IA (2009) Winter cereal yields as affected by animal manure and green manure in organic arable farming. Eur J Agron 30:119–128CrossRefGoogle Scholar
  62. Parkin TB (2008) Effect of sampling frequency on estimates of cumulative nitrous oxide emissions. J Environ Qual 37:1390–1395PubMedCrossRefGoogle Scholar
  63. Pathak H, Li C, Wassmann H, Ladha JK (2006) Simulation of nitrogen balance in rice-wheat systems of the Indo-Gangetic plains. Soil Sci Soc Am J 70:1612–1622CrossRefGoogle Scholar
  64. Petersen SO (1999) Nitrous oxide emissions from manure and inorganic fertilizer applied to spring barley. J Environ Qual 28:1610–1618CrossRefGoogle Scholar
  65. Petersen BM, Jensen LS, Hansen S, Pedersen A, Henriksen TM, Sørensen P, Trinsoutrot-Gattin I, Berntsen J (2005) CN-SIM: a model for the turnover of soil organic matter. II. Short-term carbon and nitrogen development. Soil Biol Biochem 37:375–393CrossRefGoogle Scholar
  66. Petersen SO, Regina K, Pollinger A, Rigler E, Valli L, Yamulki S, Esala M, Syvasalo E, Vinther FP (2006) Nitrous oxide emissions from organic and conventional crop rotations in five European countries. Agric Ecosyst Environ 112:200–206CrossRefGoogle Scholar
  67. Pringle MJ, Baxter SJ, Marchant BP, Lark RM (2008) Spatial analysis of the error in a model of nitrogen. Ecol Model 211:453–467CrossRefGoogle Scholar
  68. Rochette P, Desjardins RL, Pattey E (1991) Spatial and temporal variability of soil respiration in agricultural fields. Can J Soil Sci 71:189–196CrossRefGoogle Scholar
  69. Roelandt C, Van Wesemael B, Rounsevell M (2005) Estimating annual N2O emissions from agricultural soils in temperate climates. Glob Chang Biol 11:1701–1711CrossRefGoogle Scholar
  70. Roland K, Sun Q, Ingwersen J, Chen X, Zhang F, Müller T, Römheld V (2010) Modelling water dynamics with DNDC and DAISY in a soil of the North China Plain: a comparative study. Environ Modell Softw 25:583–601CrossRefGoogle Scholar
  71. Saggar S, Giltrap DL, Li C, Tate KR (2007) Modelling nitrous oxide emissions from grazed grasslands in New Zealand. Agric Ecosyst Environ 119:205–216CrossRefGoogle Scholar
  72. SAS Institute (1996) SAS/STAT™ Software: changes and enhancements through release 6.11. SAS Institute, Cary, NCGoogle Scholar
  73. Schimel JP, Bennett J (2004) Nitrogen mineralization: challenges of a changing paradigm. Ecology 85:591–602CrossRefGoogle Scholar
  74. Schjønning P, Munkholm LJ, Elmholt S, Olesen JE (2007) Organic matter and soil tilth in arable farming: Management makes a difference within 5–6 years. Agric Ecosyst Environ 122:157–172CrossRefGoogle Scholar
  75. Sharifi M, Zebarth BJ, Burton DL, Grant CA, Porter GA (2008) Organic amendment history and crop rotation effects on soil nitrogen mineralization potential and soil nitrogen supply in a potato cropping system. Agron J 100:1562–1572CrossRefGoogle Scholar
  76. Smith KA, Dobbie KE (2001) The impact of sampling frequency and sampling times on chamber-based measurements of N2O emissions from fertilized soils. Global Chang Biol 7:933–945CrossRefGoogle Scholar
  77. Smith P, Smith JU, Powlson DS, McGill WB, Arah JRM, Chertov OG, Coleman K, Franko U, Frolking S, Jenkinson DS, Jensen LS, Kelly RH, Klein-Gunnewiek H, Komarov AS, Li C, Molina JAE, Mueller T, Parton WJ, Thornely JHM, Whitmore AP (1997) A comparison of the performance of nine soil organic matter models using datasets from seven long-term experiments. Geoderma 81:153–225CrossRefGoogle Scholar
  78. Smith KA, Ball T, Conen F, Dobbie KE, Massheder J, Rey A (2003) Exchange of greenhouse gases between soil and atmosphere: interactions of soil physical factors and biological processes. Eur J Soil Sci 54:779–791CrossRefGoogle Scholar
  79. Stange F, Butterbach-Bahl K, Papen H, Zechmeister-Boltenstern S, Li C, Aber J (2000) A process-oriented model of N2O and NO emissions from forest soils. 2. Sensitivity analysis and validation. J Geophys Res 105:4385–4398CrossRefGoogle Scholar
  80. Subedi KD, Ma BL, Liang BC (2006) New method to estimate root biomass in soil through root-derived carbon. Soil Biol Biochem 38:2212–2218CrossRefGoogle Scholar
  81. Tang H, Qiu J, Van Ranst E, Li C (2006) Estimation of soil organic carbon storage in cropland of China based on DNDC model. Geoderma 134:200–206CrossRefGoogle Scholar
  82. Tedischi LO (2006) Assessment of the adequacy of mathematical models. Agric Syst 89:225–247CrossRefGoogle Scholar
  83. Thorup-Kristensen K, Dresbøll DB (2010) Incorporation time of nitrogen catch crops influences the N effect for the succeeding crop. Soil Use Manage 26:27–35CrossRefGoogle Scholar
  84. Tonitto C, David MB, Li C, Drinkwater LE (2007) Application of the DNDC model to tile-drained Illinois agroecosystems: model comparison of conventional and diversified rotations. Nutr Cycl Agroecosyst 78:65–81CrossRefGoogle Scholar
  85. Van Den Bossche A, de Bolle S, de Neve S, Hofman G (2009) Effect of tillage intensity on N mineralization of different crop residues in a temperate climate. Soil Tillage Res 103:316–324CrossRefGoogle Scholar
  86. Watson CA, Atkinson D, Gosling P, Jackson LR, Rayns FW (2002) Managing soil fertility in organic farming systems. Soil Use Manage 18:239–247CrossRefGoogle Scholar
  87. Werner C, Butterbach-Bahl K, Haas E, Hickler T, Kiese R (2007) A global inventory of N2O emissions from tropical rainforest soils using a detailed biogeochemical model. Glob Biogeochem Cycles 21:GB3010. doi:10.1029/2006GB002909 CrossRefGoogle Scholar
  88. Wraith JM, Robinson DA, Jones SB, Long D (2005) Spatially characterizing apparent electrical conductivity and water content of surface soils with time domain refectometry. Comput Electron Agric 46:239–262CrossRefGoogle Scholar
  89. Yoh M, Toda H, Kanda K, Tsuruta H (1997) Diffusion of N2O cycling in a fertilized soil. Nutr Cycl Agroecosyst 49:29–33CrossRefGoogle Scholar
  90. Zhang Y, Li C, Zhou X, Moore B III (2002) A simulation model linking crop growth and soil biogeochemistry for sustainable agriculture. Ecol Model 151:75–108CrossRefGoogle Scholar

Copyright information

© Springer Science+Business Media B.V. 2010

Authors and Affiliations

  • Ngonidzashe Chirinda
    • 1
    • 3
  • Daniela Kracher
    • 2
  • Mette Lægdsmand
    • 1
  • John R. Porter
    • 3
  • Jørgen E. Olesen
    • 1
  • Bjørn M. Petersen
    • 1
  • Jordi Doltra
    • 1
  • Ralf Kiese
    • 2
  • Klaus Butterbach-Bahl
    • 2
  1. 1.Department of Agroecology and EnvironmentAarhus UniversityTjeleDenmark
  2. 2.Institute for Meteorology and Climate Research, Atmospheric Environmental Research (IMK-IFU)Karlsruhe Institute of TechnologyGarmisch-PartenkirchenGermany
  3. 3.Faculty of Life SciencesUniversity of CopenhagenTaastrupDenmark

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