Natural Computing

, Volume 5, Issue 1, pp 1–13 | Cite as

Automated Design and Programming of a Microfluidic DNA Computer

  • Michael S. Livstone
  • Ron Weiss
  • Laura F. Landweber

Abstract

Previously, we described ways to implement the functions AND and OR in a DNA computer consisting of microreactors with attached heating elements that control annealing of DNA. Based on these findings, we have devised a similar device that can solve a satisfiability problem in any form. The device occupies linear space and operates in quadratic time, while a previously described competing device is built in quadratic space and operates in quadratic time or greater. Reducing the number of reactors in a DNA computer reduces the loss of DNA through binding to the surfaces of the system.

Keywords

algorithm Boolean expression DNA computing microfluidics NP-complete satisfiability 

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Copyright information

© Springer 2006

Authors and Affiliations

  • Michael S. Livstone
    • 1
  • Ron Weiss
    • 2
  • Laura F. Landweber
    • 1
  1. 1.Department of Ecology and Evolutionary BiologyPrinceton UniversityPrincetonUSA
  2. 2.Department of Electrical EngineeringPrinceton UniversityPrincetonUSA

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