Molecular Biology Reports

, Volume 41, Issue 6, pp 3723–3731 | Cite as

Mitochondrial ATPase 6/8 genes reveal genetic divergence in the Coilia dussumieri (Valenciennes, 1848) populations of north east and northwest coasts of India

  • A. Kathirvelpandian
  • A. Gopalakrishnan
  • W. S. Lakra
  • Gopal Krishna
  • Rupam Sharma
  • P. R. Divya
  • Raj Kumar
  • J. K. Jena
Article
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Accepted:

Abstract

The golden anchovy, Coilia dussumieri, though possessing discontinuous distribution along northeast and northwest coasts of India, it is being managed as unit stock for fishery assessment purposes. By considering the need for stock specific management of the species, mitochondrial ATP synthase 6 and 8 (ATPase 6/8) genes were analyzed for delineating genetic stock structure of the species. Sequence analysis revealed a total of 34 haplotypes across four populations from both the east and west coasts of India. Haplotype diversity (h) was found in the range of 0.7421–0.9368. Similarly, nucleotide diversity (π) varied from 0.0012 to 0.0025. AMOVA results indicated a high total variance of 72.66 % between east and west coast populations and less (1.34 %) among populations within the respective coast. Phylogenetic tree constructed using pair wise FST also indicated the genetic divergence of populations of east and west coasts of India. The findings of the present study will be helpful in developing stock specific management measures for conservation and sustainable utilization of the species.

Keywords

Coilia dussumieri Mitochondrial DNA ATPase 6/8 genes Population genetic structure 
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Notes

Acknowledgments

The authors acknowledge the research scholars of NBFGR Kochi Unit, Kochi for their help in carrying out the above work.

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Copyright information

© Springer Science+Business Media Dordrecht 2014

Authors and Affiliations

  • A. Kathirvelpandian
    • 1
  • A. Gopalakrishnan
    • 2
  • W. S. Lakra
    • 3
  • Gopal Krishna
    • 3
  • Rupam Sharma
    • 3
  • P. R. Divya
    • 1
  • Raj Kumar
    • 1
  • J. K. Jena
    • 4
  1. 1.National Bureau of Fish Genetic Resources Kochi UnitCochinIndia
  2. 2.Central Marine Fisheries Research InstituteCochinIndia
  3. 3.Central Institute of Fisheries EducationMumbaiIndia
  4. 4.National Bureau of Fish Genetic ResourcesLucknowIndia

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