Molecular Breeding

, Volume 33, Issue 2, pp 477–488 | Cite as

High-resolution mapping of the barley Ryd3 locus controlling tolerance to BYDV

  • Thomas Lüpken
  • Nils Stein
  • Dragan Perovic
  • Antje Habekuß
  • Albrecht Serfling
  • Ilona Krämer
  • Urs Hähnel
  • Burkhard Steuernagel
  • Uwe Scholz
  • Ruvini Ariyadasa
  • Mihaela Martis
  • Klaus Mayer
  • Rients E. Niks
  • Nicholas C. Collins
  • Wolfgang Friedt
  • Frank Ordon
Article

Abstract

Barley yellow dwarf disease (BYD) is transmitted by aphids and is caused by different strains of Barley yellow dwarf virus (BYDV) and Cereal yellow dwarf virus (CYDV). Economically it is one of the most important diseases of cereals worldwide. Besides chemical control of the vector, growing of tolerant/resistant cultivars is an effective way of protecting crops against BYD. The Ryd3 gene in barley (Hordeum vulgare L.) confers tolerance to BYDV-PAV and BYDV-MAV and the locus was previously mapped on the short arm of barley chromosome 6H near the centromere. We applied a strategy for high-resolution mapping and marker saturation at the Ryd3 locus by exploiting recent genomic tools available in barley. In a population of 3,210 F2 plants, 14 tightly linked markers were identified, including 10 that co-segregated with Ryd3. The centromeric region where Ryd3 is located suffers suppressed recombination or reduced recombination rate, suggesting potential problems in achieving (1) map-based cloning of Ryd3 and (2) marker selection of the resistance in breeding programmes without the introduction of undesirable traits via linkage drag.

Keywords

Hordeum vulgare L. High-resolution mapping Map-based cloning Ryd3 Barley yellow dwarf virus 

Supplementary material

11032_2013_9966_MOESM1_ESM.xls (34 kb)
Supplementary material 1 (XLS 34 kb)

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Copyright information

© Springer Science+Business Media Dordrecht 2013

Authors and Affiliations

  • Thomas Lüpken
    • 1
  • Nils Stein
    • 2
  • Dragan Perovic
    • 1
  • Antje Habekuß
    • 1
  • Albrecht Serfling
    • 1
  • Ilona Krämer
    • 1
  • Urs Hähnel
    • 2
  • Burkhard Steuernagel
    • 2
  • Uwe Scholz
    • 2
  • Ruvini Ariyadasa
    • 2
  • Mihaela Martis
    • 3
  • Klaus Mayer
    • 3
  • Rients E. Niks
    • 4
  • Nicholas C. Collins
    • 5
  • Wolfgang Friedt
    • 6
  • Frank Ordon
    • 1
  1. 1.Julius Kuehn-Institute (JKI), Federal Research Centre for Cultivated PlantsInstitute for Resistance Research and Stress ToleranceQuedlinburgGermany
  2. 2.Leibniz Institute of Plant Genetics and Crop Plant Research (IPK)Stadt Seeland (OT) GaterslebenGermany
  3. 3.Munich Information Center for Protein Sequences/Institute of Bioinformatics and Systems Biology (MIPS/IBIS)Institute for Bioinformatics and Systems Biology, Helmholtz Center MunichNeuherbergGermany
  4. 4.Department of Plant Breeding, Graduate School of Experimental Plant SciencesWageningen UniversityWageningenThe Netherlands
  5. 5.Australian Centre for Plant Functional Genomics, School of Agriculture, Food and WineUniversity of AdelaideGlen OsmondAustralia
  6. 6.Institute of Crop Science and Plant Breeding IJustus-Liebig-UniversityGiessenGermany

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