Two stable QTL involved in adult plant resistance to powdery mildew in the winter wheat line RE714 are expressed at different times along the growing season
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Abstract
Powdery mildew (Blumeria graminis f. sp. tritici) is one of the major diseases of wheat (Triticum aestivum). Adult plant resistance (APR) to powdery mildew is considered more durable than resistance conferred by major race-specific resistance genes. The objective of the present study was a better understanding of the genetic basis of APR in RE714 by means of QTL analysis of several resistance scores along the growing season. A population of 160 recombinant inbred lines obtained from the cross between RE714 and Hardi (susceptible) was assessed for APR under natural infection conditions during 3 years and a genetic map with whole genome coverage was developed with microsatellite and AFLP markers in this population. Two major QTL on chromosomes 5D and 6A were detected each year, and 6 minor QTL were detected only in 1 or 2 years. The QTL on chromosome 5D was detected during all the growing season each year and its R 2 value varied between 8.5 and 56.3%, whereas the QTL on chromosome 6A was detected at 1–4 scoring dates in the 3 years, and its R 2 value varied between 6.1 and 20.5%. The two QTL explained between 24.4 and 52.1% of the phenotypic variance for AUDPC, depending on the year. The models including QTL and cofactors in the composite interval mapping explained between 29 and 72% of the variance. The molecular markers linked to the two major QTL could be used in marker-assisted selection for adult plant resistance to powdery mildew.
Keywords
QTL mapping Triticum aestivum Blumeria graminis f. sp. tritici Adult plant resistanceNotes
Acknowledgments
Molecular mapping results were in great part obtained through the OUEST-genopole® genotyping technical platform, successively supervised by S. Prioul, A. Lostanlen and S. Coedel. QTL analysis, including permutations, was performed on the OUEST-genopole® bioinformatics platform. We thank P. Sourdille for sharing information about microsatellite primer sequences ahead of publication. We thank R. Delourme, M.-L. Pilet-Nayel and T. Baldwin for their critical reading of the manuscript.
Supplementary material
References
- Appels R (2003) A consensus molecular genetic map for wheat—a cooperative international effort. In: Progna NE (ed) Tenth International Wheat Genetics Symposium, Paestum, Italy, 1–6 Sept 2003, vol 1, pp 211–214Google Scholar
- Basten CJ, Weir BS, Zeng ZB (2003) QTL Cartographer. A Reference Manual and Tutorial for QTL mapping. Department of Statistics, North Carolina State University, RaleighGoogle Scholar
- Bennet FGA (1984) Resistance to powdery mildew in wheat: a review of its use in agriculture and breeding programmes. Plant Pathol 33:279–300. doi: 10.1111/j.1365-3059.1984.tb01324.x CrossRefGoogle Scholar
- Börner A, Schumann E, Fürste A, Cöster H, Leithold B, Röder M, Weber W (2002) Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Triticum aestivum L.). Theor Appl Genet 105:921–936. doi: 10.1007/s00122-002-0994-1 PubMedCrossRefGoogle Scholar
- Bougot Y, Lemoine J, Pavoine MT, Guyomar’ch H, Gautier V, Muranty H, Barloy D (2006) A major QTL effect controlling resistance to powdery mildew in winter wheat at the adult plant stage. Plant Breed 125:550–556. doi: 10.1111/j.1439-0523.2006.01308.x CrossRefGoogle Scholar
- Boutin-Ganache I, Raposo M, Raymond M, Deschepper CF (2001) M13-tailed primers improve the readability and usability of microsatellite analyses performed with two different allele-sizing methods. Biotechniques 31:24PubMedGoogle Scholar
- Chantret N, Pavoine MT, Doussinault G (1999) The race-specific resistance gene to powdery mildew, MlRE, has a residual effect on adult plant resistance of winter wheat line RE714. Phytopathology 89:533–539. doi: 10.1094/PHYTO.1999.89.7.533 PubMedCrossRefGoogle Scholar
- Chantret N, Sourdille P, Roder M, Tavaud M, Bernard M, Doussinault G (2000) Location and mapping of the powdery mildew resistance gene MIRE and detection of a resistance QTL by bulked segregant analysis (BSA) with microsatellites in wheat. Theor Appl Genet 100:1217–1224. doi: 10.1007/s001220051427 CrossRefGoogle Scholar
- Chantret N, Mingeot D, Sourdille P, Bernard M, Jacquemin JM, Doussinault G (2001) A major QTL for powdery mildew resistance is stable over time and at two development stages in winter wheat. Theor Appl Genet 103:962–971. doi: 10.1007/s001220100645 CrossRefGoogle Scholar
- Darvasi A, Soller M (1997) A simple method to calculate resolving power and confidence interval of QTL map location. Behav Genet 27:125–132. doi: 10.1023/A:1025685324830 PubMedCrossRefGoogle Scholar
- Doerge RW, Churchill GA (1996) Permutation tests for multiple loci affecting a quantitative character. Genetics 142:285–294PubMedGoogle Scholar
- Doyle J, Doyle J (1990) Isolation of DNA from fresh tissue. Focus 12:13–15Google Scholar
- Haldane JBS (1919) The combination of linkage values and the calculation of distances between the loci of linked factors. J Genet 8:299–309. doi: 10.1007/BF02983270 CrossRefGoogle Scholar
- Hsam SLK, Lapochkina IF, Zeller FJ (2003) Chromosomal location of genes for resistance to powdery mildew in common wheat (Triticum aestivum L. em Thell.). 8. Gene Pm32 in a wheat-Aegilops speltoides translocation line. Euphytica 133:367–370. doi: 10.1023/A:1025738513638 CrossRefGoogle Scholar
- Hsam SLK, Zeller FJ (2002) Breeding for powdery mildew resistance in common wheat (Triticum aestivum L.). In: Bélanger RR, Bushnell WR, Dik AJ, Carver TLW (eds) Powdery mildews: a comprehensive treatise. Am Phytopathol Soc, St Paul, pp 219–238Google Scholar
- Jakobson I, Peusha H, Timofejeva L, Jarve K (2006) Adult plant and seedling resistance to powdery mildew in a Triticum aestivum × Triticum militinae hybrid line. Theor Appl Genet 112:760–769. doi: 10.1007/s00122-005-0181-2 PubMedCrossRefGoogle Scholar
- Keller M, Keller B, Schachermayr G, Winzeler M, Schmid JE, Stamp P, Messmer MM (1999) Quantitative trait loci for resistance against powdery mildew in a segregating wheat × spelt population. Theor Appl Genet 98:903–912. doi: 10.1007/s001220051149 CrossRefGoogle Scholar
- Knapp SJ, Stroup WW, Ross WM (1985) Exact confidence intervals for heritability on a progeny mean basis. Crop Sci 25:192–194Google Scholar
- Kosambi DD (1944) The estimations of map distances from recombination values. Ann Eugen 12:172–175Google Scholar
- Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174–181. doi: 10.1016/0888-7543(87)90010-3 PubMedCrossRefGoogle Scholar
- Liang SS, Suenaga K, He ZH, Wang ZL, Liu HY, Wang DS, Singh RP, Sourdille P, Xia XC (2006) Quantitative trait loci mapping for adult-plant resistance to powdery mildew in bread wheat. Phytopathology 96:784–789. doi: 10.1094/PHYTO-96-0784 PubMedCrossRefGoogle Scholar
- Lillemo M, Asalf B, Singh R, Huerta-Espino J, Chen X, He Z, Bjørnstad Å (2008) The adult plant rust resistance loci Lr34/Yr18 and Lr46/Yr29 are important determinants of partial resistance to powdery mildew in bread wheat line Saar. Theor Appl Genet 116:1155–1166. doi: 10.1007/s00122-008-0743-1 CrossRefGoogle Scholar
- Liu SX, Griffey CA, Saghai Maroof MA (2001) Identification of molecular markers associated with adult plant resistance to powdery mildew in common wheat cultivar Massey. Crop Sci 41:1268–1275Google Scholar
- McIntosh RA, Yamazaki Y, Devos KM, Dubcovsky J, Rogers WJ, Appels R (2003) Catalogue of gene symbols for wheat. In: Progna NE (ed) Tenth International Wheat Genetics Symposium, Paestum, Italy, 1–6 Sept 2003, vol 4, pp 1–34Google Scholar
- Messmer MM, Keller M, Zanetti S, Keller B (1999) Genetic linkage map of a wheat × spelt cross. Theor Appl Genet 98:1163–1170. doi: 10.1007/s001220051181 CrossRefGoogle Scholar
- Mingeot D, Chantret N, Baret PV, Dekeyser A, Boukhatem N, Sourdille P, Doussinault G, Jacquemin JM (2002) Mapping QTL involved in adult plant resistance to powdery mildew in the winter wheat line RE714 in two susceptible genetic backgrounds. Plant Breed 121:133–140. doi: 10.1046/j.1439-0523.2002.00679.x CrossRefGoogle Scholar
- Miranda L, Murphy J, Marshall D, Cowger C, Leath S (2007) Chromosomal location of Pm35, a novel Aegilops tauschii derived powdery mildew resistance gene introgressed into common wheat (Triticum aestivum L.). Theor Appl Genet 114:1451–1456. doi: 10.1007/s00122-007-0530-4 PubMedCrossRefGoogle Scholar
- Miranda LM, Murphy JP, Marshall D, Leath S (2006) Pm34: a new powdery mildew resistance gene transferred from Aegilops tauschii Coss. to common wheat (Triticum aestivum L.). Theor Appl Genet 113:1497–1504. doi: 10.1007/s00122-006-0397-9 PubMedCrossRefGoogle Scholar
- Muranty H, Pavoine MT, Jaudeau B, Radek W, Doussinault G, Barloy D (2008) A quantitative approach detects three QTLs involved in powdery mildew resistance at the seedling stage in the winter wheat line RE714. Aust J Agric Res 59:714–722. doi: 10.1071/AR07378 CrossRefGoogle Scholar
- Parlevliet JE (1983) Durable resistance in self-fertilizing annuals. In: Lamberti F, Waller JM, Van der Graaff NA (eds) Durable resistance in crops. Plenum Press, New York, pp 347–362Google Scholar
- R-Development-Core-Team (2006) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, AustriaGoogle Scholar
- Robe P, Doussinault G (1995) Genetic analysis of powdery-mildew resistance of a winter-wheat line, RE714, and identification of a new specific-resistance gene. Plant Breed 114:387–391. doi: 10.1111/j.1439-0523.1995.tb00817.x CrossRefGoogle Scholar
- Robe P, Pavoine MT, Doussinault G (1996) Early assessment of adult plant reaction of wheat (Triticum aestivum L) to powdery mildew (Erysiphe graminis f sp tritici) at the five-leaf stage. Agronomie 16:441–451. doi: 10.1051/agro:19960704 CrossRefGoogle Scholar
- Singrün C, Hsam SLK, Hartl L, Zeller FJ, Mohler V (2003) Powdery mildew resistance gene Pm22 in cultivar Virest is a member of the complex Pm1 locus in common wheat (Triticum aestivum L. em Thell.). Theor Appl Genet 106:1420PubMedGoogle Scholar
- Somers DJ, Isaac P, Edwards K (2004) A high-density microsatellite consensus map for bread wheat (Triticum aestivum L.). Theor Appl Genet 109:1105–1114. doi: 10.1007/s00122-004-1740-7 PubMedCrossRefGoogle Scholar
- Sourdille P, Cadalen T, Guyomarc’h H, Snape JW, Perretant MR, Charmet G, Boeuf C, Bernard S, Bernard M (2003) An update of the Courtot × Chinese Spring intervarietal molecular marker linkage map for the QTL detection of agronomic traits in wheat. Theor Appl Genet 106:530–538PubMedGoogle Scholar
- Sourdille P, Gandon B, Chiquet V, Nicot N, Somers DJ, Murigneux A, Bernard M (2004) Wheat Génoplante SSR mapping data release: a new set of markers and comprehensive genetic and physical mapping data. http://wheat.pw.usda.gov/ggpages/SSRclub/GeneticPhysical/
- Suenaga K, Khairallah M, William HM, Hoisington DA (2005) A new intervarietal linkage map and its application for quantitative trait locus analysis of “gigas” features in bread wheat. Genome 48:65–75. doi: 10.1139/g04-092 PubMedCrossRefGoogle Scholar
- Sun X-L, Liu D, Zhang H-Q, Huo N-X, Zhou R-H, Jia J-Z (2006) Identification and mapping of two new genes conferring resistance to powdery mildew from Aegilops tauschii (Coss.) Schmal. J Integr Plant Biol 48:1204–1209. doi: 10.1111/j.1744-7909.2006.00328.x CrossRefGoogle Scholar
- Tixier MH, Sourdille P, Röder M, Leroy P, Bernard M (1997) Detection of wheat microsatellites using a non radioactive silver-nitrate staining method. J Genet Breed 51:175–177Google Scholar
- Tucker D, Griffey C, Liu S, Brown-Guedira G, Marshall D, Maroof M (2007) Confirmation of three quantitative trait loci conferring adult plant resistance to powdery mildew in two winter wheat populations. Euphytica 155:1–13. doi: 10.1007/s10681-006-9295-0 CrossRefGoogle Scholar
- Tucker DM, Griffey CA, Liu S, Maroof MAS (2006) Potential for effective marker-assisted selection of three quantitative trait loci conferring adult plant resistance to powdery mildew in elite wheat breeding populations. Plant Breed 125:430–436. doi: 10.1111/j.1439-0523.2006.01233.x CrossRefGoogle Scholar
- van Ooijen JW (1992) Accuracy of mapping quantitative trait loci in autogamous species. Theor Appl Genet 84:803–811. doi: 10.1007/BF00227388 CrossRefGoogle Scholar
- Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Frijters A, Pot J, Pelemen J, Kuiper M, Zabeau M (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 23:4407–4414. doi: 10.1093/nar/23.21.4407 PubMedCrossRefGoogle Scholar
- Yao G, Zhang J, Yang L, Xu H, Jiang Y, Xiong L, Zhang C, Zhang Z, Ma Z, Sorrells M (2007) Genetic mapping of two powdery mildew resistance genes in einkorn (Triticum monococcum L.) accessions. Theor Appl Genet 114:351–358. doi: 10.1007/s00122-006-0438-4 PubMedCrossRefGoogle Scholar
- Zeng ZB (1993) Theoretical basis for separation of multiple linked gene effects in mapping quantitative trait loci. Proc Natl Acad Sci USA 90:10972–10976. doi: 10.1073/pnas.90.23.10972 PubMedCrossRefGoogle Scholar
- Zeng ZB (1994) Precision mapping of quantitative trait loci. Genetics 136:1457–1468PubMedGoogle Scholar
- Zhu ZD, Zhou RH, Kong XY, Dong YC, Jia JZ (2005) Microsatellite markers linked to 2 powdery mildew resistance genes introgressed from Triticum carthlicum accession PS5 into common wheat. Genome 48:585–590. doi: 10.1139/g05-016 PubMedCrossRefGoogle Scholar