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Metascience

, Volume 18, Issue 2, pp 179–205 | Cite as

Life Through A Microbial Lens

  • Susan Spath
  • Maureen O’Malley
  • Jesse Zaneveld
  • Rob Knight
  • Carl Zimmer
Review Symposium

Keywords

Horizontal Gene Transfer Genetic Code Living Thing Science Writer Personal Sense 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

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References

  1. Blount, Z. D., C. Z. Borland and R. E. Lenski. “Historical Contingency and the Evolution of a Key Innovation in an Experimental Population of Escherichia coli”, Proceedings of the National Academy of Sciences 105 (2008), pp. 7899–7906.CrossRefGoogle Scholar
  2. Ditzler, M. A., D. Rueda, J. Mo, K. Hakansson and N. G. Walter. “A Rugged Free Energy Landscape Separates Multiple Functional RNA Folds Throughout Denaturation”, Nucleic Acids Research 36 (2008) pp. 7088–7099.CrossRefGoogle Scholar
  3. Eckburg, P. B., E. M. Bik, C. N. Bernstein, E. Purdom, L. Dethlefsen, M. Sargent, S. R. Gill, K. E. Nelson and D. A. Relman “Diversity of the Human Intestinal Microbial Flora”, Science 308 (2005), pp. 1635–1638.CrossRefGoogle Scholar
  4. Federoff, N. V. and N. M. Brown. Mendel in the Kitchen: A Scientist’s View of Genetically Modified Foods (Washington, DC: Joseph Henry Press, 2004).Google Scholar
  5. Hotopp, J. C., M. E. Clark, D. C. Oliveira, J. M. Foster, P. Fischer, M. C. Torres, J. D. Giebel, N. Kumar, N. Ishmael, S. Wang, J. Ingram, R. V. Nene, J. Shepard, J. Tomkins, S. Richards, D. J. Spiro, E. Ghedin, B. E. Slatko, H. Tettelin and J. H. Werren, “Widespread Lateral Gene Transfer from Intracellular Bacteria to Multicellular Eukaryotes”, Science 317 (2007), pp. 1753–1756.CrossRefGoogle Scholar
  6. Jarvis, K. G., J. A. Giron, A. E. Jerse, T. K. McDaniel, M. S. Donnenberg and J. B. Kaper, “Enteropathogenic Escherichia coli Contains a Putative Type III Secretion System Necessary for the Export of Proteins Involved in Attaching and Effacing Lesion Formation”, Proceedings of the National Academy of Sciences 92 (1995), pp. 7996–8000.CrossRefGoogle Scholar
  7. Oyama, S, P. E. Griffiths and R. D. Gray. Cycles of Contingency: Developmental Systems and Evolution (Cambridge, MA: MIT Press, 2001).Google Scholar
  8. Tuerk, C. and L. Gold. “Systematic Evolution of Ligands by Exponential Enrichment: RNA Ligands to Bacteriophage T4 DNA Polymerase”, Science 249 (1990), pp. 505–510.CrossRefGoogle Scholar
  9. Turnbaugh, P. J., M. Hamady, T. Yatsunenko, B. L. Cantarel, A. Duncan, R. E. Ley, M. L. Sogin, W. J. Jones, B. A. Roe, J. P. Affourtit, M. Egholm, B. Henrissat, A. C. Heath, R. Knight and J. I. Gordon. “A Core Gut Microbiome in Obese and Lean Twins”, Nature 457 (2008), pp. 480–484.CrossRefGoogle Scholar
  10. Welch, R. A., V. Burland, G. Plunkett, III, P. Redford, P. Roesch, D. Rasko, E. L. Buckles, S. R. Liou, A. Boutin, J. Hackett, D. Stroud, G. F. Mayhew, D. J. Rose, S. Zhou, D. C. Schwartz, N. T. Perna, H. L. Mobley, M. S. Donnenberg and F. R. Blattner. “Extensive Mosaic Structure Revealed by the Complete Genome Sequence of Uropathogenic Escherichia coli”, Proceedings of the National Academy of Sciences 99 (2002), pp. 17020–17024.CrossRefGoogle Scholar
  11. Yarus, M., J. G. Caporaso and R. Knight. “Origins of the Genetic Code: The Escaped Triplet Theory”, Annual Review of Biochemistry 74 (2005), pp. 179–198.Google Scholar

Copyright information

© Springer Science+Business Media B.V. 2009

Authors and Affiliations

  • Susan Spath
    • 1
  • Maureen O’Malley
    • 2
  • Jesse Zaneveld
    • 3
  • Rob Knight
    • 3
  • Carl Zimmer
    • 4
  1. 1.BerkeleyUSA
  2. 2.ESRC Centre for Genomics in SocietyUniversity of ExeterExeterUK
  3. 3.Molecular, Cellular & Developmental Biology and Chemistry & BiochemistryUniversity of ColoradoBoulderUSA
  4. 4.ConnecticutUSA

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