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Journal of Paleolimnology

, Volume 46, Issue 4, pp 525–542 | Cite as

A diatom dataset and diatom-salinity inference model for southeast Australian estuaries and coastal lakes

  • Krystyna M. Saunders
Original paper

Abstract

To quantify the relationship between diatom species assemblages and the water chemistry of southeast Australian estuaries and coastal lakes, a new dataset of 81 modern diatom samples and water chemistry data was created. Three hundred and ninety-nine species from 53 genera were identified in 36 samples from 32 coastal water bodies in eastern Tasmania and 45 samples from 13 coastal water bodies in southern Victoria. Multivariate statistical analyses revealed that the sampling sites were primarily distributed along salinity and nutrient gradients, and that salinity, nitrate + nitrite, phosphate and turbidity explained independent portions of variance in the diatom data. Species salinity optima and tolerances were determined and a diatom-salinity inference model (WAinv r 2 = 0.72, r 2jack = 0.58, RMSEP = 0.09 log ppt) was developed. This new information on diatom species’ salinity preferences provides a useful tool for quantitatively reconstructing salinity changes over time from diatom microfossils preserved in the sediments of a range of estuaries and coastal lakes in southeast Australia. This is valuable for studies investigating long-term human impacts and climate change in the region.

Keywords

Diatoms Multivariate analyses Transfer function Australia Water quality Coast 

Notes

Acknowledgments

This study was funded by an Australian Postgraduate Award, with additional funding from the Australian Institute of Nuclear Science and Engineering, Project Aware and the PADI Foundation. I would particularly like to thank Dr. Dom Hodgson for his advice throughout the project and preparation of this manuscript. I would also like to thank Kathryn Taffs, Kaarina Weckström, John Gibson and Andrew McMinn for project advice and taxonomic assistance; Steve Juggins for statistical advice; and Kate Dziegielewska, Jessie Webb and Sarah Lovibond for field assistance. Special thanks are also due to the two anonymous reviewers of the original version of this manuscript for their very helpful suggestions, which resulted in a much improved presentation of the results.

Supplementary material

10933_2010_9456_MOESM1_ESM.pdf (328 kb)
Supplementary material 1 (PDF 328 kb)
10933_2010_9456_MOESM2_ESM.pdf (66 kb)
Supplementary material 2 (PDF 65 kb)

References

  1. ANZECC (2000) Australian and New Zealand guidelines for fresh and marine water quality. Australian and New Zealand Environment and Conservation Council, Canberra. Available from http://www.environment.gov.au/water/quality/nwqms/index.html, Cited Aug 2006
  2. Battarbee RW (1986) Diatom analysis. In: Berglund BE (ed) Handbook of holocene palaeoecology and palaeohydrology. Wiley, New York, pp 527–570Google Scholar
  3. Battarbee RW, Jones VJ, Flower RJ, Cameron NG, Bennion H, Carvalho L, Juggins S (2001) Diatoms. In: Smol JP, Birks HJB, Last WM (eds) Tracking environmental change using lake sediments: terrestrial, algal and siliceous indicators, vol 3. Kluwer, Dordrecht, pp 155–202CrossRefGoogle Scholar
  4. Bennion H (2010) European Diatom Database: http://www.ecrc.ucl.ac.uk/index.php/content/view/296/146//(cited 13/1/10)
  5. Bennion H, Juggins S, Anderson NJ (1996) Predicting epilimnetic phosphorus concentrations using an improved diatom-based transfer function and its application to lake eutrophication management. Environ Sci Technol 30:2004–2007CrossRefGoogle Scholar
  6. Bigler C, Hall RI (2003) Diatoms as quantitative indicators of July temperature: a validation attempt at century-scale with meteorological data from northern Sweden. Palaeogeogr Palaeoclimatol Palaeoecol 189:147–160CrossRefGoogle Scholar
  7. Birks HJB (1998) Numerical tools in paleolimnology—progress, potentialities, and problems. J Paleolimnol 20:307–322CrossRefGoogle Scholar
  8. Birks HH, Birks HJB, Flower RJ, Peglar SM, Ramdani M (2001) Recent ecosystem dynamics in nine North African lakes in the CASSARINA Project. Aquat Ecol 35:461–478CrossRefGoogle Scholar
  9. Blinn DW, Bailey PCE (2001) Land-use influence on stream water quality and diatom communities in Victoria, Australia: a response to secondary salinization. Hydrobiologia 466:231–244CrossRefGoogle Scholar
  10. BOM (2009) http://www.bom.gov.au. Cited Nov 2008
  11. Clarke A, Juggins S, Conley DJ (2003) A 150-year reconstruction of the history of coastal eutrophication in Roskilde Fjord, Denmark. Mar Pol Bul 46:1615–1629CrossRefGoogle Scholar
  12. Davis JR, Koop K (2006) Eutrophication in Australian rivers, reservoirs and estuaries—a southern hemisphere perspective on the science and its implications. Hydrobiologia 559:23–76CrossRefGoogle Scholar
  13. Duke N, Lawn PT, Roelfsema CM, Zahmel KN, Pedersen DK, Harris C, Steggles N, Tack C (2003) Assessing historical change in coastal environments: Port Curtis, Fitzroy River Estuary and Moreton Bay Regions. Report to the Cooperative Research Centre for Coastal Zone Estuary and Water Management. Brisbane: Marine Botany Group, Centre for Marine Studies, University of QueenslandGoogle Scholar
  14. Ellegaard M, Clarke A, Reuss N, Drew S, Weckström K, Juggins S, Anderson NJ, Conley DJ (2006) Multi-proxy evidence of long-term changes in ecosystem structure in a Danish marine estuary, linked to increased nutrient loading. Estuar Coast Shelf Sci 68:567–578CrossRefGoogle Scholar
  15. Eriksen R (1997) A practical manual for the determination of salinity, dissolved oxygen, and nutrients in seawater. Antarctic Co-operative Research Centre Report No. 11, Hobart, AustraliaGoogle Scholar
  16. Fluin J, Gell PA, Haynes D, Tibby J, Hancock G (2007) Palaeolimnological evidence for the independent evolution of neighbouring terminal lakes, the Murray Darling Basin, Australia. Hydrobiologia 591:117–134CrossRefGoogle Scholar
  17. Fritz SC, Juggins S, Battarbee RW, Engstrom DR (1991) Reconstruction of past changes in salinity and climate using a diatom-based transfer function. Nature 352:706–708CrossRefGoogle Scholar
  18. Gasse F, Juggins S, Khelifa LB (1995) Diatom-based transfer functions for inferring past hydrochemical characteristics of African lakes. Palaeogeogr Palaeoclimatol Palaeoecol 117:31–54CrossRefGoogle Scholar
  19. Gehrels WR, Szkornik K, Bartholdy J, Kirby JR, Bradley SL, Marshall WA, Heinemeier J, Pedersen JBT (2006) Late Holocene sea-level changes and isostasy in western Denmark. Quat Int 66:208–302Google Scholar
  20. Gell PA, Sluiter IR, Fluin J (2002) Seasonal and interannual variations in diatom assemblages in Murray River connected wetlands in north-west Victoria, Australia. Mar Freshw Res 53:981–992CrossRefGoogle Scholar
  21. Glew JR (1991) Miniature gravity corer for recovering short gravity cores. J Paleolimnol 5:285–287CrossRefGoogle Scholar
  22. Hassan GS, Espinosa MA, Isla FI (2007) Dead diatom assemblages in surface sediments from a low impacted estuary: the Queque’n Salado river, Argentina. Hydrobiologia 579:257–270CrossRefGoogle Scholar
  23. Hassan GS, Espinosa MA, Isla FI (2009) Diatom-based inference model for paleosalinity reconstructions in estuaries along the northeastern coast of Argentina. Palaeogeogr Palaeoclimatol Palaeoecol 275:77–91CrossRefGoogle Scholar
  24. Haynes D, Gell PA, Tibby J, Hancock G, Goonan P (2007) Against the tide: the freshening of naturally saline coastal lakes, southeastern South Australia. Hydrobiologia 591:165–183CrossRefGoogle Scholar
  25. Hill MO (1973) Diversity and evenness: a unifying notation and its consequences. Ecology 54:427–432 CrossRefGoogle Scholar
  26. Hodgson DA, Tyler PA, Vyverman W (1996) The palaeolimnology of Lake Fidler, a meromictic lake in south west Tasmania and the significance of recent human impact. J Paleolimnol 18:313–333CrossRefGoogle Scholar
  27. Hodgson DA, Vyverman WG, Tyler PA (1997) Diatoms of meromictic lakes adjacent to the Gordon River, and of the Gordon River estuary in south-west Tasmania. In: Lange-Berlot H, Kociolek P (eds) Bioliotheca diatomologica band 35. Gebruder Borntraeger, BerlinGoogle Scholar
  28. Horton BP, Corbett R, Culver SJ, Edwards RJ, Hillier C (2006) Modern saltmarsh diatom distributions of the Outer Banks, North Carolina, and the development of a transfer function for high resolution reconstructions of sea level. Estuar Coast Shelf Sci 69:381–394CrossRefGoogle Scholar
  29. John J (1983) The diatom flora of the Swan River Estuary Western Australia, vol 64. Bibliotheca Phycologica, VaduzGoogle Scholar
  30. Juggins S (1992) Diatoms in the Thames Estuary, England: ecology, paleoecology, and salinity transfer function. In: Lange-Bertalot H (ed) Bibliotheca Diatomologica, vol 25. J. Cramer, Berlin, pp 1–216Google Scholar
  31. Juggins S (2003) C2 user guide. Software for ecological and palaeoecological data analysis and visualisation. University of Newcastle, Newcastle Upon TyneGoogle Scholar
  32. Juggins S (2004) Monitoring long-term trends in eutrophication and nutrients in the coastal zone. Available from http://Craticula.ncl.ac.uk/Molten/jsp/
  33. Kingston JC, Birks HJB, Uutala AJ, Cumming BF, Smol JP (1992) Assessing trends in fishery resources and lake water aluminum from paleolimnological analyses of siliceous algae. Can J Fish Aquat Sci 49:116–127CrossRefGoogle Scholar
  34. Lim DSS, Smol JP, Douglas MSV (2007) Diatom assemblages and their relationship to lakewater nitrogen levels and other limnological variables from 36 lakes and ponds on Banks Island, N.W.T., Canadian Arctic. Hydrobiologia 586:191–211CrossRefGoogle Scholar
  35. Philibert A, Gell PA, Newall P, Chessman B, Bate N (2006) Development of diatom-based tools for assessing stream water quality in south-eastern Australia: assessment of environmental transfer functions. Hydrobiologia 572:103–114CrossRefGoogle Scholar
  36. Reid MA, Tibby JC, Penny D, Gell PA (1995) The use of diatoms to assess past and present water quality. Aust J Ecol 20:57–64CrossRefGoogle Scholar
  37. Ryves DB, Clarke AL, Appleby PG, Amsinck SL, Jeppesen E, Landkildehus F, Anderson NJ (2004) Reconstructing the salinity and environment of the Limfjord and Vejlerne Nature Reserve, Denmark, using a diatom model for brackish lakes and fjords. Can J Fish Aquat Sci 61:1988–2006CrossRefGoogle Scholar
  38. Saunders KM, McMinn A, Roberts D, Hodgson DA, Heijnis H (2007) Recent human-induced salinity changes in Ramsar-listed Orielton lagoon, southeast Australia. Aquat Conserv Mar Freshw Ecosyst 17:51–70CrossRefGoogle Scholar
  39. Saunders KM, Hodgson DA, Harrison J, McMinn A (2008) Palaeoecological tools for improving the management of coastal ecosystems: a case study from Lake King (Gippsland Lakes) Australia. J Paleolimnol 40:33–47CrossRefGoogle Scholar
  40. Smol JP, Douglas MSV (2007) Crossing the final ecological threshold in high Arctic ponds. Proc Nat Acad Sci USA 104:12395–12397CrossRefGoogle Scholar
  41. SoE (2006) State of the environment report. Australian Commonwealth Government Department of Environment and Heritage, available at: http://www.deh.gov.au/soe/2006/
  42. Sonneman JA, Sincock A, Fluin J, Reid MA, Newall P, Tibby JC, Gell P (2000) An illustrated guide to common stream diatom species from temperate Australia. Cooperative Research Centre for Freshwater Ecology, AlburyGoogle Scholar
  43. Stoemer EF, Smol JP (1999) The diatoms: applications for the environmental and earth sciences. Cambridge University Press, Cambridge, pp 352–373Google Scholar
  44. Taffs KH (2005) Diatoms of Northern New South Wales, Australia. Unpublished dataset. Southern Cross University, AustraliaGoogle Scholar
  45. Taffs KH, Farago LJ, Heijnis H, Jacobsen G (2008) A diatom-based Holocene record of human impact from a coastal environment: Tuckean Swamp, eastern Australia. J Paleolimnol 39:71–82CrossRefGoogle Scholar
  46. Taukulis FE, John J (2009) Development of a diatom-based transfer function for lakes and streams severely impacted by secondary salinity in the south-west region of Western Australia. Hydrobiologia 626:129–143CrossRefGoogle Scholar
  47. R Development Core Team (2006) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. ISBN 3-900051-07-0. Available from http://www.R-project.org
  48. ter Braak CJF (1995) Ordination. In: Jongman RHG, ter Braak CJF, van Tongeren OFR (eds) Data analysis in community and landscape ecology. Cambridge University Press, Cambridge, pp 91–173CrossRefGoogle Scholar
  49. ter Braak CJF, Smilauer P (2002) CANOCO Reference manual and CanoDraw for Windows user’s guide: software for canonical community ordination (version 4.5). Microcomputer Power, IthacaGoogle Scholar
  50. Tibby J, Gell PA, Fluin J, Sluiter IR (2007) Diatom-salinity relationships in wetlands: assessing the influence of salinity variability on the development of inference models. Hydrobiologia 591:207–218CrossRefGoogle Scholar
  51. Underwood GJC, Phillips J, Saunders K (1998) Distribution of estuarine benthic diatom species along salinity and nutrient gradients. Eur J Phycol 33:173–183CrossRefGoogle Scholar
  52. Vos PC, de Wolf H (1993) Reconstruction of sedimentary environments in Holocene coastal deposits of the southwest Netherlands; the Poortvliet boring, a case study of paleoenvironmental diatom research. Hydrobiologia 269/270:297–306CrossRefGoogle Scholar
  53. Vyverman W, Vyverman R, Hodgson D, Tyler P (1995) Diatoms from Tasmanian mountain lakes: a reference data-set (TASDIAT) Bibliotheca Diatomologica, Band 33. J. Cramer in der Gebrüder Borntraeger Verlagsbuchhandlung, Berlin, pp 1–193Google Scholar
  54. Weckström K, Juggins S (2005) Coastal diatom-environment relationships from the Gulf of Finland, Baltic Sea. J Phycol 42:21–35CrossRefGoogle Scholar
  55. Weckström K, Juggins S, Korhola A (2004) Quantifying background nutrient concentrations in coastal waters: a case study from an urban embayment of the Baltic Sea. Ambio 33:324–327Google Scholar
  56. Willis KJ, Birks JB (2006) What is natural? The need for a long-term perspective in biodiversity conservation. Science 314:1261–1264CrossRefGoogle Scholar
  57. Wilson SE, Cumming BF, Smol JP (1996) Assessing the reliability of salinity inference models from diatom assemblages: an examination of a 219-lake data set from western North America. Can J Fish Aquat Sci 53:1580–1594Google Scholar
  58. Witkowski A, Lange-Berlot H, Metzeltin D (2000) Diatom flora of marine coasts. In: Lange-Berlot H (ed) Iconographica diatomologica: annotated diatom micrographs, vol 7. A. R. G. Ganter Verlag K. G, BerlinGoogle Scholar

Copyright information

© Springer Science+Business Media B.V. 2010

Authors and Affiliations

  1. 1.Institute of Geography and Oeschger Centre for Climate Change ResearchUniversity of BernBernSwitzerland
  2. 2.Institute of Antarctic and Marine StudiesUniversity of TASHobartAustralia

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