Journal of Biomolecular NMR

, Volume 46, Issue 3, pp 251–255 | Cite as

The NMR structure of protein-glutaminase from Chryseobacterium proteolyticum

  • Hiroyuki Kumeta
  • Noriko Miwa
  • Kenji Ogura
  • Yuko Kai
  • Toshimi Mizukoshi
  • Nobuhisa Shimba
  • Ei-ichiro Suzuki
  • Fuyuhiko Inagaki
NMR Structure Note

References

  1. Ando H, Adachi M, Umeda K, Matsuura A, Nonaka M, Uchio R, Tanaka H, Motoki M (1989) Purification and characteristics of a novel transglutaminase derived from microorganisms. Agric Biol Chem 53:2613–2617Google Scholar
  2. Cornilescu G, Delaglio F, Bax A (1999) Protein backbone angle restraints from searching a database for chemical shift and sequence homology. J Biomol NMR 13:289–302CrossRefGoogle Scholar
  3. Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, Bax A (1995) NMRPipe: a multidimensional spectral processing system based on unix pipes. J Biomol NMR 6:277–293CrossRefGoogle Scholar
  4. Goddard TD, Kneller DG (1997) SPARKY 3, University of California, San Francisco http://www.cgl.ucsf.edu/home/sparky/
  5. Herrmann T, Güntert P, Wüthrich K (2002) Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. J Mol Biol 319:209–227CrossRefGoogle Scholar
  6. Holm L, Kaariainen S, Rosenstrom P, Schenkel A (2008) Searching protein structure databases with Dali Lite v.3. Bioinformatics 24:2780–2781CrossRefGoogle Scholar
  7. Kashiwagi T, Yokoyama K, Ishikawa K, Ono K, Ejima D, Matsui H, Suzuki E (2002) Crystal structure of microbial transglutaminase from Streptoverticillum mobaranse. J Biol Chem 277:44252–44260CrossRefGoogle Scholar
  8. Kikuchi Y, Itaya H, Data M, Matsui K, Wu L-F (2009) TatABC overexpression improves Corynebacterium glutamicum tat-dependent protein scretion. Appl Environ Microbiol 75:603–607CrossRefGoogle Scholar
  9. Noguchi K, Ishikawa K, Yokoyama K, Ohtsuka T, Nio N, Suzuki E (2001) Crystal structure of red sea bream transglutaminase. J Biol Chem 276:12055–12059CrossRefGoogle Scholar
  10. Shinagawa M, Shimba N, Mizukoshi T, Arashida N, Yamada N, Kikuchi Y, Suzuki E (2005) High expression with Corynebacterium glutamicum for nuclear magnetic resonance sample preparation. Anal Biochem 344:281–283Google Scholar
  11. Yamaguchi S, Jeenes DJ, Archer DB (2001) Protein-glutaminase from Chryseobacterium proteolyticum, an enzyme that deamidates glutaminyl residues in proteins. Eur J Biochem 268:1410–1421CrossRefGoogle Scholar
  12. Yee VC, Pedersen LC, Le Trong I, Bishop PD, Stenkamp RE, Teller DC (1994) Three-dimensional structure of a transglutaminase: human blood coagulation factor XIII. Proc Natl Acad Sci 91:7296–7300CrossRefADSGoogle Scholar

Copyright information

© Springer Science+Business Media B.V. 2010

Authors and Affiliations

  • Hiroyuki Kumeta
    • 1
  • Noriko Miwa
    • 2
  • Kenji Ogura
    • 1
  • Yuko Kai
    • 2
  • Toshimi Mizukoshi
    • 2
  • Nobuhisa Shimba
    • 2
  • Ei-ichiro Suzuki
    • 2
  • Fuyuhiko Inagaki
    • 1
  1. 1.Laboratory of Structural Biology, Graduate School of Pharmaceutical SciencesHokkaido UniversitySapporoJapan
  2. 2.Institute of Life SciencesAjinomoto Co., Inc.Kawasaki-shiJapan

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