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Journal of Assisted Reproduction and Genetics

, Volume 35, Issue 8, pp 1473–1482 | Cite as

Genome-wide screening differential long non-coding RNAs expression profiles discloses its roles involved in OHSS development

  • Haiyan Lin
  • Yu Li
  • Weijie Xing
  • Qi Qiu
  • Wenjun Wang
  • Qingxue Zhang
Genetics
  • 53 Downloads

Abstract

Objective

To screen differentially expressed lncRNAs involved in OHSS. OHSS is defined as ovarian hyperstimulation syndrome. It is characterized as enlarged ovary and increased vascular permeability.

Design

Case-control study.

Setting

University-affiliated hospital.

Patient(s)

Patients with OHSS high risk (n = 30) and low risk (n = 30) were included in this study.

Intervention(s)

None.

Main outcome measure(s)

LncRNAs from women with OHSS high risk and low risk were used for high-throughput sequencing profiling. The eight most differentially expressed lncRNAs in granulosa cells were validated by semi-quantitative reverse transcription-polymerase chain reaction analysis.

Result(s)

A total of 23,815 lncRNAs were detected and 482 were differentially expressed (fold-change ≥2; p < 0.05, FDR value < 0.001), of which 205 were upregulated and 277 were downregulated. Lnc-SEC16B.1-6, lnc-SNURF-13, lnc-LGR6-6, and lnc-H2AFY2-2 were up-regulated, while lnc-BRD2-2, lnc-HSPA6-2, and lnc-CLIC6-5 were downregulated significantly in granulosa cells. These results were confirmed by qRT-PCR. KEGG pathways and Gene Ontology enrichment analysis revealed that several biological processes were significantly associated. Meanwhile, the lncRNA/miRNA interaction network was established according to ceRNA network model.

Conclusion(s)

Comprehensive expression screening identified eight novel lncRNAs associated with risk factors of OHSS process. Although it is unclear how these altered lncRNAs regulate the process of OHSS, our findings suggest these lncRNAs may be novel players in OHSS development.

Keywords

OHSS lncRNA Development 

Notes

Acknowledgements

This study was funded by National Natural Science Funding (no. 81701519).

Supplementary material

10815_2018_1199_MOESM1_ESM.xls (170 kb)
ESM 1 (XLS 169 kb)

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Copyright information

© Springer Science+Business Media, LLC, part of Springer Nature 2018

Authors and Affiliations

  • Haiyan Lin
    • 1
  • Yu Li
    • 1
  • Weijie Xing
    • 2
  • Qi Qiu
    • 1
  • Wenjun Wang
    • 1
  • Qingxue Zhang
    • 1
  1. 1.Department of Gynecology and ObstetricsSun Yat-Sen Memorial HospitalGuangzhouChina
  2. 2.Department of Gynecology and Obstetrics, The third Affiliated HospitalSun Yat-Sen UniversityGuangzhouChina

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