Salt tolerance in wild relatives of adzuki bean, Vigna angularis (Willd.) Ohwi et Ohashi
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Salt stress is becoming a serious problem in food production field. To find sources of salt tolerance, we screened 74 accessions of adzuki bean (Vigna angularis) and 145 accessions of cross-compatible wild relatives (seven species). We performed the primary screening in soil culture and the secondary screening in hydroponic culture, and identified JP205833 of V. riukiuensis (strain ‘Tojinbaka’) and JP107879 of V. nakashimae (strain ‘Ukushima’) as the valuable source of salt tolerance. We found these two strains had different salt tolerance mechanism, where ‘Ukushima’ prevented Na+ accumulation in leaves by filtering Na+ in roots and stems, while ‘Tojinbaka’ accumulated Na+ throughout the whole plant body. We also found ‘Tojinbaka’ and ‘Ukushima’ could retain photosynthesis even under salt stress. In addition, ‘Ukushima’ and especially ‘Tojinbaka’ showed even better growth in a salt-damaged field in Fukushima, Japan where soybean cultivar ‘Tachinagaha’ could not survive. Since both salt tolerant strains are cross-compatible with adzuki bean, our results will facilitate developing salt tolerant cultivar by introducing two different mechanisms of salt tolerance.
KeywordsAdzuki bean Genetic resource Genus Vigna Legume Salt tolerance Wild crop relatives
Soil salinity is a major constraint of food production because it limits crop yield and restricts uses of uncultivated land (Flowers and Yeo 1995). Currently, approximately 20 % of irrigated cropland in the world has already been salt-damaged, and another 30 % are considered salt-affected. In total, more than 800 Mha are salt-affected land in the world (FAO 2008). Given the rapidly growing world population, development of salt tolerant crop cultivars is inevitable to stabilize food production in cropland and to use currently unfavorable land.
The genus Vigna (Leguminosae) comprises six subgenera distributed in Africa, Asia, Australia and America (Verdcourt 1970; Maréchal et al. 1978). Most of the Vigna species in Asia belong to the subgenus Ceratotropis, known as the Asian Vigna (Tomooka et al. 2002). Of these, six species have been domesticated; adzuki bean [V. angularis var. angularis (Willd.) Ohwi and Ohashi], mung bean [V. radiata (L.) Wilczek], black gram [V. mungo (L.) Hepper], moth bean [V. aconitifolia (Jacq.) Maréchal], rice bean [V. umbellata (Thunb.) Ohwi et Ohashi] and creole bean [V. reflexo-pilosa Hayata var. glabra (Maréchal, Mascherpa et Stainier) N. Tomooka et Maxted]. Wild relatives possess greater genetic diversity than their related cultigens, and have been adapted to various environments including coastal and saline areas (Tomooka et al. 2009). Therefore, such genetic resources are expected to contain genetic factors for salt tolerance, which might be useful for cross breeding (Shannon 1997).
In Asian Vigna species, adzuki bean, mung bean and black gram are especially important as human food. As for mung bean and black gram, belonging to section Ceratotropis, many studies of salt tolerance have been reported and some tolerant wild and cultivated accessions have been identified (Mohamed and El Kramany 2005; Sehrawat et al. 2013; Win et al. 2013). By contrast, for adzuki bean and other Asian wild species belonging to section Angulares, little has been studied (Yamauchi et al. 1989; Lee and Hong 2000). Adzuki bean is a traditional legume crop grown across East Asia and northern South Asia (Hanelt and IPK 2001; Zong et al. 2003). Since adzuki bean is cross-compatible with many wild species (V. hirtella Ridley, V. minima (Roxb.) Owhi et Ohashi, V. nakashimae (Ohwi) Ohwi et Ohashi, V. nepalensis Tateishi et Maxted, V. riukiuensis (Ohwi) Ohwi et Ohashi, and V. tenuicaulis N. Tomooka et Maxted), (Doi et al. 2002) screening wild relatives for salt tolerance might be an efficient approach to develop salt tolerant cultivars via cross-breeding, and to isolate tolerance genes by linkage analysis.
Plant salt tolerance is considered to involve either avoidance (“excluder type”) or tolerance (“includer type”) mechanisms (Levitt 1980; Munns and Tester 2008). The “excluder type” plants are able to exclude toxic ions from internal plant tissue, while “includer type” plants take up Na+ ions with a relatively lower toxicity (Johnson et al. 1991). In genus Vigna, only “excluder type” has been reported so far, where salt tolerant accessions of mung bean and V. unguiculata (L.) Walp. (cowpea) can restrict Na+ uptake from the root or prevent Na+ migration from the root to the aerial part (Jacoby 1964; Lessani and Marschner 1978; Fernandes de Melo et al. 1994; West and Francois 1982; Bernardo et al. 2006). In adzuki bean, similar mechanisms were reported in response to salt stress while no salt tolerant cultivars were found (Yamauchi et al. 1989).
In this study, we screened adzuki bean and its wild relatives for salt tolerance. Some of the selected strains were further investigated for Na+ accumulation and photosynthetic response, and tested for growth in a salt-damaged field.
Materials and methods
Plant materials used in this study
No. of accessions
Origin (no. of accessions)
Japan (49), Republic of Korea (18), Nepal (2)
Japan (3), Myanmar (2)
Thailand (5), Myanmar (7), Laos (19)
Thailand (11), Indonesia (1), Myanmar (3), Laos (8)
Republic of Korea (30), Japan (1)
Japan (27),Taiwan (1)
Thailand (4), Myanmar (24), Laos (2)
Salt tolerance screening in soil culture
Primary screening for salt tolerance was conducted at NIAS in Tsukuba, Japan (36°03′N, 140°10′E). The 219 accessions were grown in plastic pots (7 cm in diameter × 9 cm in height) under natural light condition in a greenhouse from June in 2009. The soil used in the pot was KUREHA-Engei-Baido (KUREHA Inc, Japan). Twenty-one days after sowing, an adequate amount of salt solutions was applied in the pool and then the pots were immersed for 2 weeks. NaCl concentration was set to 0, 50, 100, 150 or 200 mM. Two plants with two replications were tested in each treatment.
Tolerance was evaluated at 1 and 2 weeks after treatment started. Each plant was visually scored by percent of wilted leaves as follows; 1 = No leaves wilted, 2 = 1–25 % of leaves wilted, 3 = 26–50 % of leaves wilted, 4 = 51–75 % of leaves wilted, 5 = 76–99 % of leaves wilted and 6 = all leaves wilted (ESM Fig. 1).
Salt tolerance screening in hydroponic culture
Measuring Na+ accumulation in plants
Four days after the NaCl concentration reached 200 mM, leaves, stems and roots were separately harvested from the three plants of V. angularis (JP233136, ‘Kyoto Dainagon’), V. nakashimae (JP107879, ‘Ukushima’) and V. riukiuensis (JP235833, ‘Tojinbaka’). The harvested samples were dried at 62 ºC for 24 h, ground into a powder and were reduced to ash for sodium extraction with 100 μL of 1 N HNO3. The cation concentrations in the leaves, stems and roots were determined using an ion chromatograph with a conductivity detector (Shimazu, Japan). Oxalic acid (3.3 mM) was used as the mobile phase. The mobile phase was degassed by degasser (DGU-12A) and pumped with liquid chromatograph pump (LC-9A) at speed 1 μL/min. This mobile phase was flown to the auto injector (SIL-6B) and mixed with 10 µL of ample solutions to be homogenized, which was controlled by the system controller (SCL-6B). The Na+ concentration was detected through the analytical column (IC-C3) in the column oven (CTO-10A) at 40 ºC. The result was printed by a chromatopac (C-R 6A). The standard solution of the Na+ concentration (for 100 % was equated with 2 ppm) was measured for wring a standard calibration to calculate the correct ion concentrations of the sample solution.
Evaluation of photosynthetic activity and stomatal conductance
Seeds of V. angularis (JP233136, ‘Kyoto Dainagon’), V. nakashimae (JP107879, ‘Ukushima’) and V. riukiuensis (JP235833, ‘Tojinbaka’) were germinated on Seramis (Effem GmbH, Verden, Germany) clay and hydroponically grown in a greenhouse for 4 weeks before measuring photosynthetic rate and stomatal conductance. To minimize the osmotic shock, 50 mM NaCl was added to the nutrient solution 3 days before the NaCl concentration was raised to 100 mM. The salt treated plants were grown for 7 days in 100 mM NaCl conditions. The control plants were grown in salt-free nutrient solution during the experiment. The photosynthetic rate and stomatal conductance of the topmost fully expanded leaves were measured using a portable photosynthesis system (LI-6400, LI-COR Inc., Lincoln, NE, USA). The measurements were obtained from 10:00 am–14:00 pm at 1 day before salt treatment, 3 days after 50 mM NaCl treatment, 3 and 7 days after 100 mM NaCl treatment. The measurement was done for 10 replications in each of salt treated and control plant under 1200 μmol photon m−2 s−1 photosynthetic photon flux density, at 31.9 ± 3.2 °C leaf temperature, 38.8 ± 4.7 % relative humidity and 399.9 ± 0.2 ppm CO2 concentration. The measurements were performed after approximately 3 min of light exposure when the CO2 gas exchange rate reached a steady state.
Growth test in a salt-damaged field
We borrowed a salt-damaged field and a de-salted field from a farmer in Soma-city, Fukushima prefecture, Japan, where tsunami covered his field by the East Japan Earthquake on March 11, 2011. We sowed seeds of V. nakashimae (JP107879, ‘Ukushima’) and V. riukiuensis (JP235833, ‘Tojinbaka’) and soybean (Glycine max) (JP67666, cv. ‘Tachinagaha’) on June 11th, 2013, and harvested the whole plant shoot above ground on October 31th, 2013. We cultivated 32 plants for each strain/cultivar in a salt damaged and a de-salted field, and measured dry weight of each plant to evaluate plant growth.
Evaluation of salt tolerance in soil culture
A total of 219 accessions of eight species (Table 1, ESM Table 1) were evaluated for salt tolerance in soil culture (ESM Fig. 1; ESM Table 2). Levels of damage under 50, 100, 150 or 200 mM of NaCl for 1 and 2 weeks were visualized as heat maps based on the wilt score (Fig. 1). The results showed most accessions of V. nakashimae and V. riukiuensis were highly tolerant and survived 2 weeks in 150 mM NaCl. In this screening V. nakashimae showed better performance, since in 200 mM NaCl condition, 19 of 31 accessions of V. nakashimae survived 2 weeks, while only 3 of 28 accessions of V. riukiuensis could survive. Especially, JP212341, JP212342 and JP107879 (strain ‘Ukushima’) of V. nakashimae showed no visual damage symptoms in 150 mM NaCl for 2 weeks and in 200 mM for 1 week (ESM Table 2). Large intraspecific variations were observed in V. minima, V. tenuicaulis and V. angularis, while no tolerant accessions were found in V. hirtella and V. napelensis. In cultivated accessions, one of the V. angularis accession (JP81144) was the most tolerant but leaf wilt was already observed at 2 weeks of 100 mM treatment (ESM Table 2).
Evaluation of salt tolerance in hydroponic culture
According to soil culture screening, we selected 20 tolerant and 10 susceptible accessions and re-evaluated in hydroponic culture (Figs. 1, 2; ESM Table 3). To attenuate osmotic shock, we initiated salt stress with 50 mM NaCl for 1 week, 100 mM for another 1 week, and finally set it to 200 mM. We evaluated wilt scores every week (ESM Fig. 1). The result was visualized as heat maps (Fig. 2). Almost all accessions were severely damaged at 1 week after NaCl concentration reached 200 mM (Fig. 2; ESM Table 3). However, some accessions of V. nakashimae and V. riukiuensis exhibited no or little damage at this time point and survived for 2 weeks or longer in 200 mM NaCl condition. In this experiment, JP235833, strain ‘Tojinbaka’ of V. riukiuensis, showed the highest tolerance and survived up to 6 weeks in 200 mM NaCl (week 8 in Fig. 2). Although V. nakashimae accessions scored the higher tolerance in soil culture screening, none of them could survive more than 3 weeks in 200 mM NaCl (week 6 in Fig. 2). Compared to soil culture, phenotypic variation in V. angularis and V. hirtella was smaller in hydroponic culture while that in V. nakashimae was greater.
Na+ accumulation in plant body
Photosynthetic rate and stomatal conductance under salt stress
Stomatal conductance (gs) of ‘Kyoto-Dainagon’, ‘Ukushima’ and ‘Tojinbaka’ under salt stress for 13 days or control condition was compared (Fig. 5b). The result showed that gs fell down to almost zero in ‘Kyoto-Dainagon’ and ‘Ukushima’ by salt stress, whereas ‘Tojinbaka’ still maintained gs approximately 25 % of that in control condition.
Growth test in a salt-damaged field
In this study, we have screened accessions of adzuki bean and the six related wild species for breeding salt tolerant cultivars or isolating tolerance genes. Our results revealed salt tolerance in adzuki bean was limited, but was prominent in several accessions of the two wild species, V. riukiuensis and V. nakashimae (Figs. 1, 2; ESM Tables 2, 3). Of these, we identified two strains, JP235833 of V. riukiuensis (‘Tojinbaka’) and JP107879 of V. nakashimae (‘Ukushima’) as highly valuable genetic source of salt tolerance (Figs. 1, 2, 3, 4, 5, 6). The amount of accumulated Na+ in plant body revealed that the strain ‘Ukushima’ filtered Na+ by roots and stems to prevent Na+ uptake into leaves while ‘Tojinbaka’ accumulated similar amount of Na+ throughout the whole plant body (Fig. 4). In addition, both strains have capacity to retain photosynthetic activity and growth under salt stress compared with that of adzuki bean cv. ‘Kyoto-Dainagon’ or soybean cv. ‘Tachinagaha’, although this capacity is limited in ‘Ukushima’ (Figs. 5, 6).
Salt tolerance and other features in the selected strains
The different characteristics of Na+ accumulation observed in strains ‘Ukushima’ and ‘Tojinbaka’ indicated different mechanisms of salt tolerance. Since in ‘Ukushima’ the amount of Na+ uptake was highest in the roots and the lowest in the leaves, this strain is considered to have “excluder type” mechanism where Na+ is excluded from internal tissue, or accumulated in apoplastic compartments (Levitt 1980, Fig. 4). In contrast, Na+ was accumulated throughout the whole plant body in ‘Tojinbaka’, suggesting this strain has an “includer type” mechanism where Na+ is partly detoxified or isolated into vacuoles (Levitt 1980). Perhaps the former mechanism was also present in adzuki bean cv. ‘Kyoto-Dainagon’ but was not strong enough to prevent Na+ uptake into aerial parts, sine Na+ uptake into the leaves were still lower compared to that into the stems (Fig. 4).
Since both ‘Ukushima’ and ‘Tojinbaka’ are cross compatible with adzuki bean, they could be of great value for breeding to improve salt tolerance of this domesticated species. In addition, it would be interesting to introduce both “excluder type” and “include type” mechanisms into one adzuki bean cultivar. Further, crossing these two strains to adzuki bean would also facilitate linkage analysis to isolate genes of different salt tolerance mechanisms. Such genes, if identified, will be very useful to improve salt tolerance of crops through transgenic techniques, or genome editing. Indeed, we already developed F2 plants derived from ‘Ukushima’ X ‘Tojinbaka’ and observed a transgressive segregation of salt tolerance (unpublished data). This fact suggested that salt tolerance in these two strains is genetically different and additive to each other.
Measuring photosynthetic response of ‘Ukushima’ and ‘Tojinbaka’ also revealed different features of these two strains. Even 50 mM of NaCl decreased photosynthetic rate in adzuki bean cv. ‘Kyoto-Dainagon’ (JP233136), but not at all in ‘Tojinbaka’ (Fig. 5a). In the 100 mM NaCl condition, cv. ‘Kyoto-Dainagon’ almost lost stomatal conductance and arrested photosynthesis while ‘Tojinbaka’ still retained 50–60 % photosynthetic rate with relatively lower stomatal conductance (Fig. 5a, b). In ‘Ukushima’, the photosynthetic response to salt stress was similar to cv. ‘Kyoto-Dainagon’ but less severe. Thus, at least in hydroponic culture, the strain ‘Tojinbaka’ of V. riukiuensis is the most tolerant to salt stress. Interestingly, without salt stress, the strain ‘Ukushima’ exhibited higher photosynthetic rate than cv. ‘Kyoto-Dainagon’, while ‘Tojinbaka’ achieved similar rate of photosynthesis with lower stomatal conductance (Fig. 5a, b). Thus, these two strains could also be useful in breeding for higher productivity (photosynthetic rate), drought tolerance or efficient water use (comparable photosynthetic rate under lower stomatal conductance).
In addition to the two strains described above, we also identified other tolerant accessions from V. nakashimae and V. riukiuensis. The tolerant accessions of these species are often found in coastal areas and thus are considered to adapt to salt affected environment (Tomooka et al. 1992, 2002). Our results also demonstrated the importance of detailed geographical information of genetic resources when screening for tolerance against environmental stresses.
Peformance of selected strains under salt-damaged field
The tsunami that followed the East Japan Earthquake on March 11, 2011 left 24,000 ha of salt-damaged farmland (Endo and Kang 2015). In the salt-damaged field, it is still impossible to cultivate crops including soybean (Fig. 6). However, both of the selected strains of V. nakashimae and V. riukiuensis, ‘Ukushima’ and ‘Tojinbaka’, respectively, showed similar or even better growth in the salt-damaged field. Therefore, these strains with different salt tolerance mechanism selected by soil pot and hydroponic culture experiments are considered to be practically useful genetic resources for breeding of salt tolerant adzuki bean cultivars.
Difference of salt tolerance in soil culture and hydroponic culture
Although several strains of V. nakashimae and V. riukiuensis repeatedly exhibited salt tolerance, we found some differences between the results of soil culture and hydroponic culture (Figs. 1, 2, 6; ESM Tables 2, 3). In general, strains of V. nakashimae were revealed to be more salt tolerant than those of V. riukiuensis in soil culture, whereas the tendency was opposite in hydroponic culture. Such differences might be because in soil culture the salt water in the pool gradually reached the root system of the plants, while in hydroponic culture plant roots were directly exposed to salt-containing solution. The effect of symbiotic arbuscular mycorrhizal fungi (Evelin et al. 2009) or other soil micro-organisms is also possible, which would make evaluation of salt tolerance more complicated. Thus, the screening in hydroponic culture might provide more direct evaluation of salt tolerance in genetic resources.
We would demonstrate that wild relatives of domesticated species are genetic resources of great value for tolerance against salt, and probably against other environmental stresses. The wild species of genus Vigna could be a good example according to its huge diversity of environmental habitations. Although we screened only ~200 wild accessions belonging to section Angulares, which is one of the sections of subgenus Ceratotropis of genus Vigna, we successfully obtained highly valuable source of salt tolerance. Since more diversity is found in other subgenera including subgenus Plectotropis and subgenus Vigna, we expect we can find more valuable source of stress tolerance. Finding adaptive traits and genes from the wild species will facilitate development of stress tolerant crops and contribute the issue of global food security.
We appreciate the National Institute of Agrobiological Sciences (NIAS) genebank project for financial support and also supplying the seeds of accessions.
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