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Euphytica

, 214:109 | Cite as

Genetic dissection of rice (Oryza sativa L.) tiller, plant height, and grain yield based on QTL mapping and metaanalysis

  • L. Lei
  • H. L. Zheng
  • J. G. Wang
  • H. L. Liu
  • J. Sun
  • H. W. Zhao
  • L. M. Yang
  • D. T. Zou
Article
  • 135 Downloads

Abstract

Tiller number per plant (TN) and plant height (PH) are important agronomic traits related to grain yield (GY) in rice (Oryza sativa L.). A total of 30 additive quantitative trait loci (A-QTL) and 9 significant additive × environment interaction QTLs (AE-QTL) were detected, while the phenotypic and QTL correlations confirmed the intrinsic relationship of the three traits. These QTLs were integrated with 986 QTLs from previous studies by metaanalysis. Consensus maps contained 7156 markers for a total map length of 1112.71 cM, onto which 863 QTLs were projected; 78 meta-QTLs (MQTLs) covering 11 of the 30 QTLs were detected from the cross between Dongnong422 and Kongyu131 in this study. A total of 705 predicted genes were distributed over the 21 MQTL intervals with physical length <0.3 Mb; 13 of the 21 MQTLs, and 34 candidate genes related to grain yield and plant development, were screened. Five major QTLs, viz. qGY6-2, qPH7-2, qPH6-3, qTN6-1, and qTN7-1, were not detected in the MQTL intervals and could be used as newly discovered QTLs. Candidate genes within these QTL intervals will play a meaningful role in molecular marker-assisted selection and map-based cloning of rice TN, PH, and GY.

Keywords

QTL analysis Metaanalysis Rice (Oryza sativa L.) Yield Plant height Tiller number per plant 

Notes

Acknowledgements

This work was supported by the National Natural Science Foundation (31601377).

Compliance with ethical standards

Conflict of interest

The authors declare no conflicts of interest regarding the publication of this paper.

Supplementary material

10681_2018_2187_MOESM1_ESM.doc (230 kb)
Supplementary material 1 (DOC 230 kb)

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© Springer Nature B.V. 2018

Authors and Affiliations

  1. 1.College of AgricultureNortheast Agricultural UniversityHarbinPeople’s Republic of China

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