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Euphytica

, 213:115 | Cite as

Genetic mapping of the qGCR6 locus affecting glossiness of cooked rice

  • Sheng-Shan Wang
  • Kai-Yi Chen
  • Yann-Rong Lin
  • Rong-Kuen ChenEmail author
Article
  • 197 Downloads

Abstract

A japonica variety, Koshihikari, is known to have favorable eating quality. Two rice backcross inbred lines (BILs) developed from Koshihikari exhibited significantly different glossiness of cooked rice (GCR), an eating quality trait measured using the Toyo-taste meter. Genetic analysis indicated that the genetic composition of these two BILs differed only on the short arm of chromosome 6, which led to the identification of the qGCR6 locus. Through high-resolution genetic mapping, the qGCR6 locus was further delimited to a 43.9 kb chromosomal region containing ten putative genes. The DNA marker SNP2175, which tightly links to qGCR6, was developed and can be used in marker-assisted breeding programs.

Keywords

Eating quality Genetic mapping DNA marker Rice 

Notes

Acknowledgements

This study was supported by grants from the Tainan District Agricultural Research and Extension Station, Council of Agriculture, Executive Yuan, Taiwan.

Supplementary material

10681_2017_1904_MOESM1_ESM.tif (342 kb)
Supplementary material 1 (TIFF 341 kb)
10681_2017_1904_MOESM2_ESM.tif (348 kb)
Supplementary material 2 (TIFF 347 kb)
10681_2017_1904_MOESM3_ESM.pdf (98 kb)
Supplementary material 3 (PDF 98 kb)

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Copyright information

© Springer Science+Business Media Dordrecht 2017

Authors and Affiliations

  • Sheng-Shan Wang
    • 1
  • Kai-Yi Chen
    • 2
  • Yann-Rong Lin
    • 2
  • Rong-Kuen Chen
    • 1
    Email author
  1. 1.Tainan District Agricultural Research and Extension StationTainanTaiwan
  2. 2.Department of AgronomyNational Taiwan UniversityTaipeiTaiwan

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