Sulfur isotopes in otoliths allow discrimination of anadromous and non-anadromous ecotypes of sockeye salmon (Oncorhynchus nerka)
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Oncorhynchus nerka occur both as anadromous sockeye salmon that spend most of their life in the ocean, and as non-anadromous kokanee salmon that remain in fresh water their entire lives. We assessed whether stable isotopes of sulfur (δ34S) in otoliths could be used to distinguish sockeye salmon and kokanee ecotypes that are otherwise difficult to identify when they share a common freshwater rearing environment. We also investigated the chemical link between salmon and their diet by measuring δ34S in various fish tissues (eggs, muscle, scales) and zooplankton. δ34S (mean±SE) in sockeye salmon eggs (18.7 ± 0.4‰) and marine zooplankton (20.5 ± 0.1‰) were enriched by 10–14‰ compared with kokanee eggs and freshwater zooplankton. δ34S in the otolith cores of sockeye salmon (19.2 ± 0.7‰) and kokanee salmon (5.3 ± 1.1‰) were similar to δ34S in marine and freshwater zooplankton, respectively, indicating that the core is derived from maternal yolk tissue and reflects the maternal diet. δ34S in the freshwater growth zone of otoliths did not differ significantly between sockeye (5.9 ± 1.1‰) and kokanee salmon (4.4 ± 1.2‰), and was similar to freshwater zooplankton. The mean difference between δ34S in the otolith core and first year of growth was 13.3 ± 1.4‰ for sockeye and 0.65 ± 1.3‰ for kokanee salmon. A quadratic discriminant function developed from measurements of δ34S in otoliths of known maternal origin provided perfect classification rates in cross-validation tests. Thus, sulfur isotope ratios in otoliths are effective in discriminating between anadromous and non-anadromous ecotypes of O. nerka.
KeywordsOncorhynchus nerka Ecotypes Sockeye salmon Kokanee Otolith microchemistry δ34S
Declining populations of anadromous salmon in western North America have prompted implementation of conservation measures including freshwater habitat restoration and hatchery supplementation (Lackey et al. 2006). The success of these approaches has been difficult to evaluate when visually indistinguishable anadromous and non-anadromous ecotypes co-exist in freshwater. For example, Oncorhynchus nerka commonly occurs both as anadromous sockeye salmon (hereafter called “sockeye”) which spend most of their life in the ocean, typically rearing in fresh water for less than 2 years, and as non-anadromous “kokanee” which live in fresh water for their entire lives. Although these ecotypes are typically genetically distinct, genetic analyses are sometimes inadequate to discriminate them when differentiation is limited or when hybridization occurs (Foote et al. 1989; Taylor et al. 1996; Wood et al. 2008).
Chemical markers including elemental ratios from otoliths such as Sr:Ca can be used to discriminate sympatric populations (Kalish 1990). However, studies that have used otolith Sr:Ca to infer maternal origin of salmonids have had mixed success (Rieman et al. 1994; Volk et al. 2000). On the other hand, Zimmerman and Reeves (2000, 2002) were successful at discriminating anadromous and non-anadromous Oncorhynchus mykiss. The limitation is due to the fact that Sr:Ca in the core of an otolith does not depend solely on the maternal origin but also on background concentrations in freshwater, migratory distances, and the length of the time in freshwater prior to spawning (Donohoe et al. 2008). δ34S offers a promising alternative to elemental signatures since organic sulfur in animal tissue is derived from organic sulfur in their diet and δ34S differs between marine and freshwater environments with little to no trophic fractionation and temperature effect (Peterson and Fry 1987; Hesslein et al. 1991; Barnes and Jennings 2007). δ34S in marine prey and sea water consistently tends to be about 20‰ (Goldhaber and Kaplan 1974; Thode 1991). In contrast, δ34S signatures in freshwater vary according to watershed geology, anthropogenic inputs, and atmospheric deposition (Mitchell et al. 2001) and tend to be lower than those in the ocean.
The contribution of marine and freshwater prey in the diet of salmonids is expected to be reflected by the chemical composition in their tissues (DeNiro and Epstein 1978; Hesslein et al. 1993; Doucett et al. 1999a), as well as in the protein matrix of their otoliths (Weber et al. 2002). Although proteins for less than 5% of an otolith’s weight, they play an important role in the morphogenesis of the microcrystalline calcium carbonate of otoliths (Kang et al. 2008). Sulfur-based amino acids, such as cysteine, are in four of the five proteins found in otoliths, and these are important for the proper folding and stabilization of a protein’s three-dimensional structure (R. Kollamar, SUNY Downstate Medical Center, NY, USA, pers. comm.). Because anadromous ecotypes accumulate the bulk of their chemical constituents during their ocean life (Burgner 1991; Naiman et al. 2002), their eggs, and to a lesser extent their alevins are expected to carry a marine δ34S signature until the start of exogenous feeding, and then again when they migrate to sea. In contrast, non-anadromous ecotypes are expected to carry a freshwater δ34S signature throughout their lives. δ34S has the additional advantage of potentially being useful to discriminate hatchery from wild fish (Weber et al. 2002).
The ability to determine the dietary history of anadromous fish using otolith δ34S signatures was demonstrated by Weber et al. (2002). However, little is known of the variability in δ34S signatures as Weber et al. (2002) analyzed only the otoliths of two salmon: a wild Chinook salmon (O. tchawytsha) and a hatchery-reared Chinook salmon. Also, when young salmon and kokanee co-exist in ectogenic meromictic lakes, which are not uncommon in coastal British Columbia (Walker and Likens 1975), complications may result from the intrusion of saltwater. In ectogenic meromictic lakes, water below the chemocline contains marine-derived sulfur, which may be brought to the surface by methane production or strong wind events and incorporated in the food web via primary producers. Zooplankton may thus serve as a direct vector of marine δ34S to anadromous and non-anadromous fry and smolt ecotypes.
The main objective of this study was to expand on the work of Weber et al. (2002) by assessing the usefulness of δ34S to discriminate anadromous and non-anadromous ecotypes of O. nerka, on the basis of their maternal origin, as either marine or freshwater. This was accomplished by analyzing δ34S in otoliths of adult kokanee and sockeye from several British Columbia lakes, including a meromictic lake. In addition, we measured the δ34S signature in fish eggs, muscles, scales and zooplankton, the primary prey consumed by kokanee and sockeye. To illustrate the utility of this approach, we used δ34S to assess the maternal origin of a sample of O. nerka collected from a meromictic lake, where both ecotypes live in sympatry.
To assess the applicability of δ34S to discriminate among ecotypes, we proceeded in four steps. First, we collected freshwater and marine zooplankton to characterize baseline δ34S. Second, we measured δ34S in various tissues of adult sockeye and kokanee as well as juvenile sockeye caught in the marine environment and contrasted these values to zooplankton δ34S to assess the trophic transfer in δ34S in aquatic food chains. Third, we measured δ34S in the otoliths of adult sockeye and kokanee of known maternal origin. Finally, we contrasted the δ34S signature in otoliths of O. nerka of unknown origin to those of adult kokanee and sockeye to assess their origin.
Type and number of samples analyzed by collection site and date (Z = zooplankton, K = kokanee, S = sockeye, Unk = unknown)
Collection month/year (no. of samples)
10/08(3), 06/09(1), 09/09(1)
06/06(3), 07/06(5), 09/06(5), 07/05(2), 10/05(2)
K whole fish
05/07(1), 06/07(1), 08/07(1), 09/07(1)
Z (Woss Lake)
07/03(1), 08/03(1), 09/03(1)
WCVI & QCI
10/07(8), 12/07(2), 12/08(4), 12/08(2)
Adult sockeye were caught in Sproat and Nimpkish lakes in 2006, and Sakinaw Lake in 2003 (Fig. 1, Table 1) during their spawning migration to their natal freshwater system. Sproat and Nimpkish are large oligotrophic dimictic lakes, while Sakinaw Lake is meromictic. The latter is a stably stratified ex-fjord, which became isolated from the Strait of Georgia approximately 11,000 years ago by sills uplifted by post-glacial isostatic rebound (Perry and Pedersen 1993). The lake consists of two basins: one relatively shallow (49 m) and wholly fresh, and the other a deep (~140 m) meromictic basin that contains relict seawater below the upper 30 m. The lake is on average 2 m above mean sea level, and a high level of sulfate is present in the oxic part of the water column (up to 65 μM) (Perry and Pedersen 1993). The water level of the lake is regulated by a small dam on the outflow near the ocean.
Nine kokanee were collected from Ruby Lake, Alouette Reservoir, and Sakinaw Lake (Fig. 1) in the fall of 2005, fall of 2007, and winter of 2008, respectively (Table 1). Ruby Lake and Alouette Reservoir have obstructions that prevent anadromous fish from entering. Ruby Lake is upstream of Sakinaw Lake while Alouette Reservoir drains into the lower Fraser River. Kokanee collected from Sakinaw Lake were mature females, recognizable by their shape, color, and relatively small size. Kokanee were collected using a 23 mm mesh size purse seine, except at Alouette Lake where gillnets were used. Ten additional specimens of unknown origin were collected in Sakinaw Lake in the fall of 2005 and winter of 2008 (Table 1) to test the utility of δ34S to assess the maternal origin from field samples. We were uncertain whether these relatively large (>18 cm) fish were sockeye or kokanee. Juvenile salmon were collected along the coast of British Columbia using a mid-water trawl in the fall of 2007 (Table 1).
Although preservation techniques varied, these seem to have little impact on δ34S (Edwards et al. 2002). Fish tissues from kokanee, sockeye and juvenile salmon from the BC coast were either from fresh or frozen fish, except for kokanee samples from Alouette Lake that were preserved in 95% ethanol. Zooplankton samples were either fresh samples, preserved in 3.7–5% formalin, or preserved in 95% ethanol.
Sample preparation and chemical analysis
Fish scales were sonified for 5 min in 3% ultrapure hydrogen peroxide to loosen debris, rinsed three times with Milli-Q water, dried, and stored in tight vials. Fish eggs, fish muscle, whole fish, and zooplankton samples were dried in an oven at 68°C, ground to a fine powder with a pestle and mortar, and stored in airtight vials prior to processing. Except for the marine zooplankton and coastal juvenile salmon, sulfur stable isotope analyses were conducted by Iso-Analytical Limited (Sandbach, UK). Tin capsules containing 2 mg of sample or reference material plus 4 mg of vanadium pentoxide were processed with an automatic sampler coupled to a Europa Scientific 20–20 isotope ratio mass spectrometer (Crewe, UK). Results are presented in delta notation (in per mil ‰) using V-CDT (troilite of the Canyon Diablo meteorite) as a reference. Samples were processed with at least 20% replication (i.e., two subsamples were analyzed from 20% of the samples), and the mean of the two subsamples was used in the analysis. The greatest difference between any pair of replicates was 0.82‰ with a mean difference of 0.094 ± 0.05‰ (1SE). Three inorganic standards were used to set the calibration scale and two organic standards were run routinely to check accuracy. The reference material used was IA-R036 (Iso-Analytical working standard barium sulfate, δ34SV-CDT = 20.74‰) calibrated and traceable to NBS-127 (barium sulfate, δ34SV-CDT = 20.3‰). IAEA-S-1 (silver sulfide, δ34SV-CDT = 0.3‰), IA-R025 (Iso-Analytical working standard barium sulfate, δ34SV-CDT = 8.53‰, calibrated and traceable to NBS-127), and IA-R036 were used for calibration and correction of the 18O contribution to the SO+ ion signal. Organic standards, more similar to fish samples than inorganic standards, were also used for quality control. IA-R036 and IA-R027 (Iso-Analytical working standard whale baleen, δ34SV-CDT = 16.3‰, calibrated and traceable to NBS-127) showed analytical precision of 0.036‰ and 0.039‰ (1SE, n = 11).
Marine zooplankton and coastal juvenile salmon were freeze-dried, then oven-dried and homogenised. Tin capsules were packed with 7–9 mg of sample and 2 mg of vanadium pentoxide and analyzed on a CF-IRMS Costech EA-Thermo Delta V IRMS at University of Victoria. Bovine Liver from the National Institute of Standards and Technology was run as the standard (δ34S 6.948 ± 0.3‰, 1SE).
Otoliths were cleaned in de-ionized water, dried, embedded in resin (Buehler 20-8130 epoxide resin with Buehler 20-8132 hardener), cured overnight at 62°C in a drying oven, and polished on both sides to expose the core area and banding. The grinding axis was through the core. Composition of sulfur isotopes in the cores to the outer edges of otoliths was analyzed by secondary ion mass spectrometry (SIMS) at the University of California in Los Angeles using a CAMECA ims 1270. Sulfur isotopic compositions were determined by sputtering otoliths with a ~2 nA to 3 nA cesium (Cs+) primary ion beam with a 25 μm spot diameter. Negative secondary ions were extracted at 10 kV, with an energy band-pass of 50 eV, and analyzed at a mass resolving power (M/ΔM) of 4000, sufficient to resolve hydride interferences. A pre-sputter time of 120 s was applied, during which centering of the secondary ions and the magnetic field setting was performed in an automated fashion. 34S/32S ratios were determined using a single electron multiplier detector and 30 –magnet-cycles-per-spot analysis which gave an in-run analytical precision between 1‰ and 2‰. Intensities were corrected for dead-time (27 nsec), and isotopic ratios were expressed as δ34S (V-CDT). Usually two analysis spots were placed in each of three zones: the core, the first year of growth, and the last year of growth. Identification of the zone corresponding to the core and first year of growth was based on the hatch check and first-feeding check (Marshall and Parker 1982). Additional measurements were obtained in the core area in order to monitor local heterogeneities. Instrumental mass fractionation was determined throughout each analytical session from replicate analysis of the outer edge of sockeye otolith assuming a marine 34S/32S of 0.04505, or δ34S (V-CDT) = +20‰ relative to V-CDT 34S/32S = 0.044163 (Ding et al. 2001). Analyses of fish of unknown maternal origin were interspersed with those of known maternal origin and isotopic data were corrected using the average instrumental mass fractionation factor from each analytical session. Instrumental mass fractionation for 34S/32S in otoliths shows only minor variability after exchange of samples in the analysis chamber, and reproduced well in two individual sessions separated by 1 year (−14.8 ± 0.4‰ in 2007, and −15.7 ± 0.4‰ in 2008; all errors are 1SE). It is also reasonable to apply the same instrumental mass fractionation for different regions of the otoliths and for different ecotypes (sockeye and kokanee) because they show similar S ion intensities, therefore suggesting that compositional variations (e.g., from different relative abundances of carbonate and organic matter) are minor.
Estimates of δ34S in the otolith core, first year of growth and the difference between the core and first year of kokanee and sockeye otoliths were compared using ANOVA (Proc GLM, SAS Institute 2008). To evaluate the effectiveness of sulfur isotopes in identifying ecotypes of O. nerka, we performed discriminant function analysis (DISCRIM, SAS Institute version 9.2) using δ34S from the core of ecotypes of known maternal origin. Before proceeding with discriminant function analysis, we tested for homogeneity of the within-group covariance matrices using a Bartlett’s modification of the likelihood ratio test (Morrison 1976; Anderson 1984). The error rate was estimated via crossvalidation, where each observation was classified using a discriminant function computed from all observations, except for the observation being classified.
Results and discussion
δ34S in zooplankton
Seasonal and interannual variation tended to be higher in freshwater than in the marine environment. Seasonal variation of δ34S in freshwater zooplankton in Nimpkish/Woss Lake, Sproat Lake and Alouette Lake was up to 2.8‰. In the meromictic Sakinaw Lake, the overall mean δ34S in freshwater zooplankton averaged 9.4‰ (Fig. 2). However, δ34S in zooplankton varied among years and basins. In 2005, the mean δ34S in zooplankton in the upper (fresh) and main (meromictic) basin averaged 7.1 ± 0.2‰ (1SE) and 7.6 ± 0.5‰ (1SE), respectively, compared to 9.4 ± 0.2‰ (1SE) and 11.1 ± 0.4‰ (1SE) in 2006. The interannual variability of δ34S in zooplankton in Sakinaw Lake may reflect variable contributions of sulfur originating below the chemocline. Sulfur is present below the chemocline, but δ34S values in the surface waters are much lower than typically found in the marine environment. Marine zooplankton samples averaged 20.5‰ in March 2007, 20.7‰ in October 2007 and 19.9‰ in March 2008. Therefore, during that time, seasonal and interannual variation was less than 1‰ for marine zooplankton.
δ34S in mature sockeye and kokanee tissues
The δ34S in fish tissues (eggs, muscle, whole fish, and scales) pooled from sockeye and kokanee were linearly related to δ34S in zooplankton. δ34S in fish tissues was on average 1.6‰ lower than that found in zooplankton (δ34S pooled fish tissues samples = −1.6 ±. 0.1‰ (1SE) + 1δ34S in zooplankton, r2 = 0.98, n = 33) which is within the range reported by McCutchan et al. (2003, 2005). Barnes and Jennings (2007) reported slightly lower fractionation values (-1‰ to 0‰) between European sea bass muscle and their laboratory diet. Weber et al. (2002), also found lower fractionation (<−0.5‰) between muscles of juvenile Chinook salmon and their diet (either gut contents or hatchery feed). Our slightly higher values of fractionation suggest that our zooplankton samples might not have been wholly representative of the diet.
δ34S in BC coastal juvenile’s salmon
δ34S of juveniles salmon caught in marine coastal water of British Columbia averaged 16.2‰ with values ranging from 12‰ (1 out of 20) to 17.4‰ (Fig. 4). δ34S in juvenile salmon were enriched by 8 to 12‰ relative to kokanee (Fig. 4), 6 to 34‰ relative to other freshwater fishes (Fig. 3), but were on average 4‰ lighter than the marine zooplankton (Fig. 2). All the juvenile salmon were caught at sea in October–November 2007, a time when seasonal and interannual variation was less than 1‰ for marine zooplankton. Consequently, the 4‰ discrepancy in δ34S between juveniles and the marine zooplankton is either due to fractionation of S between the fish and its diet, lack of equilibrium with the diet, or because the sampling locations of the marine zooplankton samples did not reflect the feeding habitats of the juveniles. The last option is a possibility since experimental work using European sea bass suggests that fractionation was minimal (0‰ to −1‰) under various ration levels and temperatures studied (Barnes and Jennings 2007).
δ34S in sockeye and kokanee otoliths
This discrepancy between values of δ34S in the freshwater diet and in otoliths might be due to seasonal and interannual variation of δ34S in freshwater zooplankton as the dates of fish and prey collection did not match (Table 1). Irregularity and roughness of the otolith surface (to which SIMS is sensitive) can also play a minor role, but the consistency in the observed differences between our results and those of Weber et al. (2002) argues against a significant impact of surface topography. Finally, some unknown degree of sulfur isotopic fractionation could be potentially introduced by fish physiology. In this case, the instrumental mass fractionation correction that assumes a marine value of 20‰ for the outer edge of sockeye otoliths could be biased if there was sulfur isotopic fractionation between the marine diet and otoliths. Diverse organic components such as protein, glucose, and triglycerides have been analyzed in both the endolymph and blood plasma (Kalish 1991). However, comprehensive work on formation of the organic matrix of an otolith in relation to sulfur-based components is lacking. One possible explanation for the discrepancy might be a difference between the composition of the endolymph (which contains the compounds involved in the acellular growth of the otolith) and that of the blood (Payan et al. 1998), which presumably reflects the diet. Furthermore, one might expect some discrepancies between the endolymph and the otoliths since the organic matrix of the otolith is composed of both preformed proteins present in the endolymph and derived from a modification of protein precursors during otolith formation (Borelli et al. 2001). Finally, inorganic sulfur from the ambient water might be incorporated into the otolith (Mugiya and Iketsu 1987), modifying the relation of the isotopic signature of sulfur between the diet and the otolith.
Our measurements of δ34S in fish tissues, freshwater zooplankton from the study lakes, and marine zooplankton from coastal British Columbia confirm the link between diet and the chemical life history of fish as recorded in their otoliths. However, it remains unclear why the freshwater isotopic signature of sulfur in otoliths tends to be somewhat lower than that of the diet.
Classification of samples of known and unknown origin
We built a quadratic discriminant function (QDF) to classify known ecotypes of O. nerka because the covariance matrix was not homogeneous between groups (X2 = 15.6, p < 0.005). Density estimates of the training data set showed two well-defined groups, sockeye and kokanee, with no significant overlap. Not surprisingly, the error rate via crossvalidation was nil. Posterior probability distributions of the training data set exceeded 93% for both ecotypes with no classification error. This indicates that δ34S in the core can be used to accurately assess the maternal origin of O. nerka.
Because δ34S varies over a wider range (55‰) than other isotopes such as C and N (Barnes and Jennings 2007), we expect that its use in otolith microchemistry will extend beyond the simple identification of maternal origin and basic life history pattern. δ34S signatures in combination with other markers, in otolith and in the environment should enable researchers to describe the environmental history (diet and temperature) of individual fish and hence improve the resolution of the food web structure, habitat uses and fish migration.
In summary, stable sulfur isotope signatures as preserved in otoliths can successfully identify the maternal origin with high predictive power and hence discriminate among ecotypes of O. nerka. δ34S in muscle has a similar potential (Doucett et al. 1999a) but the maternal signature in young-of-the-year fish is rapidly masked by the new diet, whereas it is faithfully recorded in otoliths. Thus, otoliths provide a useful chronology of fish habitats, whether artificial (hatchery) or natural (lake, stream and river). This can be a powerful tool in the evaluation of conservation approaches targeting anadromous Pacific salmon.
This research greatly benefited from significant contributions from various individuals. We greatly appreciate the efforts of Lisa Wetzel and Kim Larsen in preparing otoliths, Tatiana Bruk for assistance with preparation of tissue samples and microphotography of otoliths, Jim Cameron for sampling in Sakinaw and Ruby lakes, Paul Rankin for providing zooplankton samples from Sproat and Woss lakes, Shannon Harris for zooplankton samples from Alouette Lake, Ron Tanasichuk for euphausiid samples, Emma-Jane Johnson for otoliths of kokanee from Alouette Lake, Nicholas Duprey for Fig. 1, the staff of the PBS Ageing Lab for help with age determination, S. Mazumder at the University of Victoria for sulfur analysis, Ted Sweeten and Bill Bennett for use of their microscopes and cameras. We thank Peter Weber for useful discussions, two anonymous reviewers for their comments and suggestions, and Neil Bourne for his review. The UCLA ion microprobe laboratory is partially supported by a grant from the National Science Foundation Instrumentation and Facilities Program.
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