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Avermectin biosynthesis: stable functional expression of branched chain α-keto acid dehydrogenase complex from Streptomyces avermitilis in Escherichia coli by selectively regulating individual subunit gene expression

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Abstract

Objective

To improve the production of short branched-chain acyl-CoAs for avermectin biosynthesis, the functional expression of the branched chain α-keto acid dehydrogenase complex (BKDH) from Streptomyces avermitilis was systematically optimized by selectively regulating individual subunit expression in Escherichia coli.

Results

Functional expression of the BKDH complex was achieved by independent and selective optimization of individual subunit genes of the complex. Codon optimization significantly improved the expression of complex component proteins BkdH and LpdA1 but expression of BkdF and BkdG depended on coexpression of the bkdH gene. The optimized BKDH complex supplied sufficient short branched-chain acyl-CoA to synthesize phlorisovalerophenone, a key intermediate in bitter acid (humulone) synthesis. We also developed a novel p15A origin-derived high-copy-number vector system for expression; the yield of PIVP was 350 ng/mOD.

Conclusion

Through optimization strategies, we obtained stable, functional expression of the BKDH complex in E. coli, which could be applied in the heterologous production of numerous high-value-added chemicals, especially polyketides.

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References

  • Ævarsson A, Chuang JL, Wynn RM, Turley S, Chuang DT, Hol WG (2000) Crystal structure of human branched-chain alpha-ketoacid dehydrogenase and the molecular basis of multienzyme complex deficiency in maple syrup urine disease. Structure 8:277–291

    Article  PubMed  Google Scholar 

  • Bi H, Bai Y, Cai T, Zhuang Y, Liang X, Zhang X, Liu T, Ma Y (2013) Engineered short branched-chain acyl-CoA synthesis in E. coli and acylation of chloramphenicol to branched-chain derivatives. Appl Microbiol Biotechnol 97:10339–10348

    Article  CAS  PubMed  Google Scholar 

  • Cane DE, Liang TC, Kaplan L, Nallin MK, Schulman MD, Hensens OD, Douglas AW, Albersschoenberg G (1983) Biosynthetic origin of the carbon skeleton and oxygen atoms of the avermectins. J Amer Chem Soc 105:4110–4112

    Article  CAS  Google Scholar 

  • Clark SM, Vaitheeswaran V, Ambrose SJ, Purves RW, Page JE (2013) Transcriptome analysis of bitter acid biosynthesis and precursor pathways in hop (Humulus lupulus). BMC Plant Biol 13:12. doi:10.1186/1471-2229-13-12

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Nat Acad Sci USA 97:6640–6645

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Denoya CD, Fedechko RW, Hafner EW, McArthur HA, Morgenstern MR, Skinner DD, Stutzman-Engwall K, Wax RG, Wernau WC (1995) A second branched-chain alpha-keto acid dehydrogenase gene cluster (bkdFGH) from Streptomyces avermitilis: its relationship to avermectin biosynthesis and the construction of a bkdF mutant suitable for the production of novel antiparasitic avermectins. J Bacteriol 177:3504–3511

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gibson DG, Young L, Chuang RY, Venter JC, Hutchison CA 3rd, Smith HO (2009) Enzymatic assembly of DNA molecules up to several hundred kilobases. Nature Meth 6:343–345

    Article  CAS  Google Scholar 

  • Moore BS, Hertweck C (2002) Biosynthesis and attachment of novel bacterial polyketide synthase starter units. Natural Prod Rep 19:70–99

    Article  CAS  Google Scholar 

  • Perrakis A, Romier C (2008) Assembly of protein complexes by coexpression in prokaryotic and eukaryotic hosts: an overview. Meth Molec Biol 426:247–256

    Article  CAS  Google Scholar 

  • Shah SG, Shier WT, Jamaluddin Tahir N, Hameed A, Ahmad S, Ali N (2014) Penicillium verruculosum SG: a source of polyketide and bioactive compounds with varying cytotoxic activities against normal and cancer lines. Arch Microbiol 196:267–278

    Article  CAS  PubMed  Google Scholar 

  • Tomizawa J (1985) Control of ColE1 plasmid replication: initial interaction of RNA I and the primer transcript is reversible. Cell 40:527–535

    Article  CAS  PubMed  Google Scholar 

  • Trisciuoglio D, Uranchimeg B, Cardellina JH, Meragelman TL, Matsunaga S, Fusetani N, Del Bufalo D, Shoemaker RH, Melillo G (2008) Induction of apoptosis in human cancer cells by candidaspongiolide, a novel sponge polyketide. J Nat Canc Inst 100:1233–1246

    Article  CAS  Google Scholar 

  • Yuzawa S, Kim W, Katz L, Keasling JD (2012) Heterologous production of polyketides by modular type I polyketide synthases in Escherichia coli. Curr Opin Biotechnol 23:727–735

    Article  CAS  PubMed  Google Scholar 

  • Zhou W, Zhuang Y, Bai Y, Bi H, Liu T, Ma Y (2016) Biosynthesis of phlorisovalerophenone and 4-hydroxy-6-isobutyl-2-pyrone in Escherichia coli from glucose. Microb Cell Fact 15:149

    Article  PubMed  PubMed Central  Google Scholar 

  • Zhuo Y, Zhang T, Wang Q, Cruz-Morales P, Zhang B, Liu M, Barona-Gomez F, Zhang L (2014) Synthetic biology of avermectin for production improvement and structure diversification. Biotechnol J 9:316–325

    Article  CAS  PubMed  Google Scholar 

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Acknowledegments

This work is supported by the National Basic Research Program of China (973 Program) (No. 2013CB734003); the Key Research Program of the Chinese Academy of Sciences (No. ZDRW-ZS-2016-3-1); and the Sichuan Science and Technology Support Program (No. 2016JZ0006). We are greatly thankful for the support of Metabolomics Facility at Technology Center for Protein Sciences of Tsinghua University.

Supporting information

Supplementary Table 1—Strains, genes and plasmids.

Supplementary Table 2—Primers used in this study.

Supplementary Fig. 1—SDS-PAGE analysis of each subunit of the BKDH complex after codon optimization.

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Correspondence to Weifeng Liu or Yong Tao.

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Cui, Q., Zhou, F., Liu, W. et al. Avermectin biosynthesis: stable functional expression of branched chain α-keto acid dehydrogenase complex from Streptomyces avermitilis in Escherichia coli by selectively regulating individual subunit gene expression. Biotechnol Lett 39, 1567–1574 (2017). https://doi.org/10.1007/s10529-017-2389-z

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  • DOI: https://doi.org/10.1007/s10529-017-2389-z

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