Journal of Plant Research

, Volume 125, Issue 2, pp 237–249 | Cite as

Phylogenetic relationships of Chinese Adiantum based on five plastid markers

Regular Paper

Abstract

Adiantum consists of about 150–200 species mostly with a pantropical distribution, yet the classifications of Adiantum have been based primarily on regional studies. Confounding the clarity of reconstructing the evolutionary history of Adiantum is that previous molecular phylogenetic studies suggest that a separate and distinctive clade, the vittarioids, may be derived from within Adiantum. Five plastid markers (atpA, atpB,rbcL, trnL-F and rps4-trnS) are employed to assess the monophyly of Adiantum, and construct the molecular phylogeny of Chinese Adiantum. Our analyses support the monophyly of Adiantum. All temperate Adiantum species form a clade nested within the pantropical grade, suggesting a tropical origin of Adiantum. Six main clades are supported within Chinese Adiantum, which are only partially consistent with Lin’s classification of the genus. Series Caudata is polyphyletic with series Gravesiana nested within one subgroup of series Caudata. The prolonged whip-like stolon at the apex of the fronds is the defining character for series Caudata, but it may have evolved multiple times. Adiantum reniforme with the simple fronds is sister to series Venusta, which has a decompound lamina with many flabellate to cuneate segments. Series Veneri-capilliformia is not monophyletic, with A. capillus-veneris sister to series Flabellulata except for A. diaphanum, and A. edentulum sister to series Pedata. Series Flabellulata is biphyletic with A. diaphanum nested within the pantropical grade. The phylogeny suggests that convergent evolution in frond architecture has occurred in Adiantum.

Keywords

Adiantum China Diversification Molecular phylogeny Plastid markers Pteridaceae 

References

  1. Bouma WLM (2008) A phylogenetic investigation of the New Zealand Pteridaceae ferns. MSc Dissertation. Victoria University of Wellington, WellingtonGoogle Scholar
  2. Bouma WLM, Ritchie P, Perrie R (2010) Phylogeny and generic taxonomy of the New Zealand Pteridaceae ferns from chloroplast rbcL DNA sequences. Aust Syst Bot 23:143–151CrossRefGoogle Scholar
  3. Ching RC (1957) On the genus Adiantum L. of China with notes on some related species from neighbouring regions. Acta Phytotax Sin 6:301–354Google Scholar
  4. Christ H (1897) Die Farnkrauter der Erde. Gustav Fischer, JenaGoogle Scholar
  5. Cooper-Driver G, Swain T (1977) Phenolic chemotaxonomy and phytogeography of Adiantum. Bot J Linn Soc 74:1–21CrossRefGoogle Scholar
  6. Diels L (1902) Polypodiaceae. In: Engler A, Prantl K (eds) Die natuerlichen Pflanzenfamilien nebst ihren Gattungen und wichtigeren Arten. I. Teil. Abteilung 4. W. Engelmqann, Leipzig, pp 139–339Google Scholar
  7. Farris JS, Kallersjo M, Kuge AG, Bult C (1994) Testing significance of incongruence. Cladistics 10:315–319CrossRefGoogle Scholar
  8. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791CrossRefGoogle Scholar
  9. Gastony GJ, Rollo DR (1995) Phylogeny and generic circumscriptions of cheilanthoid ferns (Pteridaceae: Cheilanthoideae) inferred from rbcL nucleotide sequences. Am Fern J 85:341–360CrossRefGoogle Scholar
  10. Hasebe M, Wolf PG, Pryer KM, Ueda K, Ito M, Sano R, Gastony GJ, Yokoyama J, Manhart JR, Murakami N, Crane EH, Haufler CH, Hauk WD (1995) Fern phylogeny based on rbcL nucleotide sequences. Am Fern J 85:134–181CrossRefGoogle Scholar
  11. Holttum RE (1954) Revised flora of Malaya II. In: Ferns of Malaya. Government Printing Office, SingaporeGoogle Scholar
  12. Hooker WJ, Baker JG (1874) Synopsis Filicum, 2nd edn. Hardwicke, LondonGoogle Scholar
  13. Hoshizaki BJ, Moran R (2001) Fern grower’s manual-revised and expanded edition. Timber Press, PortlandGoogle Scholar
  14. Huiet L, Smith AR (2004) Phylogenetic relationships in Adiantum inferred from chloroplast coding and non–coding sequences. In: Abstracts of Botany 2004, July 31–August 5, Botanical Society of America, Salt Lake City (abstract)Google Scholar
  15. Iwatsuki K, Yamazaki T, Boufford DE, Ohba H (1995) Flora of Japan. In: Pteridophyta and gymnospermae, vol I. Kodansha Ltd, Tokyo, pp 82–84Google Scholar
  16. Jenman GS (1909) The ferns and fern allies of the British West Indies and Guiana. Government Printing Office, TrinidadGoogle Scholar
  17. Kirkpatrick REB (2007) Investigating the Monophyly of Pellaea (Pteridaceae) in the context of a Phylogenetic Analysis of Cheilanthoid Ferns. Syst Bot 32:504–518Google Scholar
  18. Kusukawa N, Uemori R, Asaca K, Kato I (1990) Rapid and reliable protocol for direct sequencing of material amplified by the polymerase chain reaction. BioTechniques 9:66–72PubMedGoogle Scholar
  19. Lin YX (1980) New taxa of Adiantum L. in China. Acta Phytotax Sin 18:101–105Google Scholar
  20. Lin YX (1990) Adiantiaceae. In: Flora Reipublicae Popularis Sinicae Tomus, vol 3, issue 1. Science Press, Beijing, pp 173–216Google Scholar
  21. Little DP, Barrington DS (2003) Major evolutionary events in the origin and diversification of the fern genus Polystichum (Dryopteridaceae). Am J Bot 90:508–514PubMedCrossRefGoogle Scholar
  22. Lu JM, Li DZ, Gao LM, Cheng X, Wu D (2005) Paraphyly of Cyrtomium (Dryopteridaceae): evidence from rbcL and trnLF sequence data. J Plant Res 118:129–135PubMedCrossRefGoogle Scholar
  23. Nayar BK (1961) Ferns of India 1 Adiantum. Bull Nat Bot Gardens (Lucknow) 52:1–38Google Scholar
  24. Norup MV, Dransfield J, Chase MW, Barfod AS, Fernando ES, Baker WJ (2006) Homoplasious character combinations and generic delimitation: a case study from the Indo-Pacific arecoid palms (Arecaceae: Areceae). Am J Bot 93:1065–1080PubMedCrossRefGoogle Scholar
  25. Paris CA (1993) Adiantum. In: Flora of North America Editorial Committee (ed) Flora of North America, vol 2. Pteridophytes and gymnosperms, Oxford Univ. Press, New York, pp 125–130Google Scholar
  26. Posada D, Buckley TR (2004) Model selection and model averaging in phylogenetics: advantages of the AIC and Bayesian approaches over likelihood ratio tests. Syst Biol 53:793–808PubMedCrossRefGoogle Scholar
  27. Posada D, Crandall KA (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14:817–818PubMedCrossRefGoogle Scholar
  28. Prado J, Rodrigues CD, Salatino A, Salatino MLF (2007) Phylogenetic relationships among Pteridaceae, including Brazilian species, inferred from rbcL sequences. Taxon 56:355–368Google Scholar
  29. Pryer KM, Smith AR, Skog JE (1995) Phylogenetic relationships of extant ferns based on evidence from morphology and rbcL sequences. Am Fern J 85:205–282CrossRefGoogle Scholar
  30. Ronquist F, Huelsenbeck JP (2003) Mrbayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572–1574PubMedCrossRefGoogle Scholar
  31. Ruhfel B, Lindsay S, Davis CC (2008) Phylogenetic placement of Rheopteris and the polyphyly of Monogramma (Pteridaceae s.l.): evidence from rbcL. Syst Bot 33:37–43CrossRefGoogle Scholar
  32. Sánchez-Baracaldo P (2004a) Phylogenetic relationships of the subfamily Taenitidoideae, Pteridaceae. Am Fern J 94:126–142CrossRefGoogle Scholar
  33. Sánchez-Baracaldo P (2004b) Phylogenetics and biogeography of the neotropical fern genera Jamesonia and Eriosorus (Pteridaceae). Amer J Bot 91:274–284CrossRefGoogle Scholar
  34. Scamman E (1960) The maidenhair fern (Adiantum) of Costa Rica. Contr Gray Herb 187:3–22Google Scholar
  35. Schneider H, Schuettpelz E, Pryer KM, Cranfill R, Magallón S, Lupia R (2004) Ferns diversified in the shadow of angiosperms. Nature 428:553–557PubMedCrossRefGoogle Scholar
  36. Schuettpelz E, Pryer KM (2007) Fern phylogeny inferred from 400 leptosporangiate species and three plastid genes. Taxon 56:1037–1050CrossRefGoogle Scholar
  37. Schuettpelz E, Korall P, Pryer KM (2006) Plastid atpA data provide improved support for deep relationships among ferns. Taxon 55:897–906CrossRefGoogle Scholar
  38. Schuettpelz E, Schneider H, Huiet L, Windham MD, Pryer KM (2007) A molecular phylogeny of the fern family Pteridaceae: assessing overall relationships and the affinities of previously unsampled genera. Mol Phylogenet Evol 44:1172–1185PubMedCrossRefGoogle Scholar
  39. Smith J (1875) Historia Filicum. Macmillan, LondonGoogle Scholar
  40. Smith AR, Pryer KM, Schuettpelz E, Korall P, Schneider H, Wolf PG (2006) A classification for extant ferns. Taxon 55:705–731CrossRefGoogle Scholar
  41. Souza-Chies TT, Bittar G, Nadot S, Carter L, Besin E, Lejeune B (1997) Phylogenetic analysis of Iridaceae with parsimony and distance methods using the plastid gene rps4. Plant Syst Evol 204:109–123CrossRefGoogle Scholar
  42. Swofford DL (2001) PAUP*. Phylogenetic analysis using parsimony (*and other methods), Version 4. Sinauer Associates, SunderlandGoogle Scholar
  43. Taberlet P, Gielly L, Pautou G, Bouvet J (1991) Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Mol Biol 17:1105–1109PubMedCrossRefGoogle Scholar
  44. Thompson JD, Gibson TJ, Plewniak F, Eanmougin F, Higgins DG (1997) The ClustalX Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876–4882CrossRefGoogle Scholar
  45. Tryon RM (1964) The ferns of Peru, Polypodiaceae (Dennstaedtieae to Oleandreae). Contr Gray Herb 194:1–253Google Scholar
  46. Tryon RM, Tryon AF (1982) Ferns and allied plants, with special reference to tropical America. Spinger-Verlag, New YorkGoogle Scholar
  47. Tryon RM, Tryon AF, Kramer KU (1990) Pteridaceae. In: Kramer KU, Green PS (eds) The families and genera of vascular plants, vol 1. Pteridophytes and gymnosperms. Springer-Verlag, Berlin, pp 230–256Google Scholar
  48. Zhang GM, Zhang XC, Chen ZD (2005) Phylogeny of cryptogrammoid ferns and related taxa based on rbcL sequences. Nord J Bot 23:485–493CrossRefGoogle Scholar
  49. Zhang GM, Zhang XC, Chen ZD, Liu HM, Yang WL (2007) First insights in the phylogeny of Asian cheilanthoid ferns based on sequences of two chloroplast markers. Taxon 56:369–378Google Scholar

Copyright information

© US Government 2011

Authors and Affiliations

  1. 1.Laboratory of Plant Biodiversity and BiogeographyKunming Institute of Botany, Chinese Academy of SciencesKunmingChina
  2. 2.Department of Botany, Smithsonian InstitutionNational Museum of Natural HistoryWashingtonUSA
  3. 3.Agricultural CollegeJiangxi Agricultural UniversityNanchangChina
  4. 4.Plant Germplasm and Genomics Center, Germplasm Bank of Wild SpeciesKunming Institute of Botany, Chinese Academy of SciencesKunmingChina

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