Journal of Plant Research

, Volume 124, Issue 4, pp 455–465 | Cite as

Origin and evolution of genes related to ABA metabolism and its signaling pathways

  • Kousuke Hanada
  • Takeshi Hase
  • Tetsuro Toyoda
  • Kazuo Shinozaki
  • Masanori Okamoto
JPR Symposium: Regular Paper Opening a New Era of ABA Research

Abstract

Since plants cannot move to avoid stress, they have sophisticated acclimation mechanisms against a variety of abiotic stresses. The phytohormone abscisic acid (ABA) plays essential roles in abiotic stress tolerances in land plants. Therefore, it is interesting to address the evolutionary origins of ABA metabolism and its signaling pathways in land plants. Here, we focused on 48 ABA-related Arabidopsis thaliana genes with 11 protein functions, and generated 11 orthologous clusters of ABA-related genes from A. thaliana, Arabidopsis lyrata, Populus trichocarpa, Oryza sativa, Selaginella moellendorffii, and Physcomitrella patens. Phylogenetic analyses suggested that the common ancestor of these six species possessed most of the key protein functions of ABA-related genes. In two species (A. thaliana and O. sativa), duplicate genes related to ABA signaling pathways contribute to the expression variation in different organs or stress responses. In particular, there is significant expansion of gene families related to ABA in evolutionary periods associated with morphological divergence. Taken together, these results suggest that expansion of the gene families related to ABA signaling pathways may have contributed to the sophisticated stress tolerance mechanisms of higher land plants.

Keywords

Abscisic acid (ABA) Arabidopsis thaliana Duplication Expression divergence Functionalization Plant evolution 

Supplementary material

10265_2011_431_MOESM1_ESM.pdf (13 kb)
Supplementary Table S1 (PDF 12 kb)
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Supplementary Table S2 (PDF 131 kb)
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Supplementary Figure S1 (PDF 2696 kb)
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Supplementary Figure S2 (PDF 563 kb)
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Supplementary Figure S5 (PDF 160 kb)

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Copyright information

© The Botanical Society of Japan and Springer 2011

Authors and Affiliations

  • Kousuke Hanada
    • 1
    • 2
    • 3
  • Takeshi Hase
    • 1
  • Tetsuro Toyoda
    • 2
  • Kazuo Shinozaki
    • 1
  • Masanori Okamoto
    • 4
    • 5
  1. 1.Gene Discovery Research GroupRIKEN Plant Science CenterYokohamaJapan
  2. 2.Bioinformatics and Systems Engineering DivisionRIKENYokohamaJapan
  3. 3.Graduate School of Bioagricultural SciencesNagoya UniversityNagoyaJapan
  4. 4.Institute of Plant Science and ResourcesOkayama UniversityKurashikiJapan
  5. 5.Center for Plant Cell Biology, Department of Botany and Plant SciencesUniversity of California, RiversideRiversideUSA

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