Marine Biotechnology

, Volume 17, Issue 1, pp 8–22 | Cite as

First Haploid Genetic Map Based on Microsatellite Markers in Senegalese Sole (Solea senegalensis, Kaup 1858)

  • Ma. Jesús Molina-Luzón
  • Miguel Hermida
  • Rafael Navajas-Pérez
  • Francisca Robles
  • José Ignacio Navas
  • Carmelo Ruiz-Rejón
  • Carmen Bouza
  • Paulino Martínez
  • Roberto de la Herrán
Original Article

Abstract

The Senegalese sole (Solea senegalensis, Kaup 1858) is a flatfish species of great value for aquaculture. In this study, we develop the first linkage map in this species based on microsatellite markers characterized from genomic DNA libraries and EST databases of Senegalese sole and from other flatfish species. Three reference gynogenetic families were obtained by chromosome-manipulation techniques: two haploid gynogenetics, used to assign and order microsatellites to linkage groups and another diploid gynogenetic family, used for estimating marker–centromere distances. The consensus map consists of 129 microsatellites distributed in 27 linkage groups (LG), with an average density of 4.7 markers per LG and comprising 1,004 centimorgans (cM). Additionally, 15 markers remained unlinked. Through half-tetrad analysis, we were able to estimate the centromere distance for 81 markers belonging to 24 LG, representing an average of 3 markers per LG. Comparative mapping was performed between flatfish species LG and model fish species chromosomes (stickleback, Tetraodon, medaka, fugu and zebrafish). The usefulness of microsatellite markers and the genetic map as tools for comparative mapping and evolution studies is discussed.

Keywords

Linkage map Senegalese sole Microsatellite markers Flatfish Comparative mapping 

Notes

Acknowledgments

This work has been supported by the Spanish Ministry of Science and Innovation (AGL2009-11872), Pleurogene-Flatfish Genomics and the Consolider-Ingenio AQUAGENOMICS Project (CSD2007-00002).

Supplementary material

10126_2014_9589_MOESM1_ESM.doc (642 kb)
ESM 1 (DOC 641 kb)

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Copyright information

© Springer Science+Business Media New York 2014

Authors and Affiliations

  • Ma. Jesús Molina-Luzón
    • 1
  • Miguel Hermida
    • 2
  • Rafael Navajas-Pérez
    • 1
  • Francisca Robles
    • 1
  • José Ignacio Navas
    • 3
  • Carmelo Ruiz-Rejón
    • 1
  • Carmen Bouza
    • 2
  • Paulino Martínez
    • 2
  • Roberto de la Herrán
    • 1
  1. 1.Facultad de Ciencias, Departamento de GenéticaUniversidad de GranadaGranadaSpain
  2. 2.Facultad de Veterinaria, Departamento de GenéticaUniversidad de Santiago de CompostelaLugoSpain
  3. 3.IFAPA, Centro Agua del PinoConsejería de Agricultura y Pesca, Junta de AndalucíaCartaya, HuelvaSpain

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