Journal of Molecular Modeling

, Volume 19, Issue 5, pp 2127–2142 | Cite as

Investigation of the antioxidant properties of hyperjovinol A through its Cu(II) coordination ability

Original Paper

Abstract

Hyperjovinol A (2-methyl-1-(2,4,6-trihydroxy-3-(3-hydroxy-3,7-dimethyloct-6-enyl)phen yl)propan-1-one) is an acylated phloroglucinol isolated from Hypericum Jovis and exhibiting antioxidant properties comparable with those of the most common antioxidant drugs. The study models the compound’s antioxidant ability through its ability to coordinate a Cu2+ ion and reduce it to Cu+. Complexes with a Cu2+ ion were calculated for all the low energy and for representative high energy conformers of hyperjovinol A, placing the ion in turn near each of the electron-rich binding sites. The most stable complexes are those in which Cu2+ binds simultaneously to the O of the OH in the geranyl-type chain (R′) and the C═C double bond at the end of R′, or to the O of a phenol OH and the O of the OH in R′. The most stable complexes in which Cu2+ binds only to one site are those in which it binds to the C═C double bond at the end of R′ or to the sp2 O of the COCH(CH3)2 acyl group. Cu2+ is reduced to Cu+ in all complexes. Comparisons with corresponding complexes of other molecular structures in which one or more of the structural features of hyperjovinol A are modified attempt to elucidate the role, for the antioxidant ability, of relevant features of hyperjovinol A, like the presence and position of the OH or the C═C double bond in R′. Calculations at the DFT/B3LYP/6–31+G(d,p) level were performed for all the structures considered. Calculations utilizing the LANL2DZ pseudopotential for the Cu2+ ion were also performed for hyperjovinol A.

Figure

A low energy complex of hyperjovinol A in which the Cu ion binds to the sp2 O atom of the acyl chain and to the O atom of the OH in the geranyl-type chain

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Keywords

Acylphloroglucinols Antioxidant activity Hyperjovinol A Hyperjovinol A-Cu2+ complexes Polyphenolic compounds 

Notes

Acknowledgments

The author expresses her gratitude to Prof. Maurizio Persico, of the Department of Chemistry and Industrial Chemistry of the University of Pisa (Italy), for his technical assistance, and to Dr. Caterina Ghio and Dr. Giuliano Alagona, of the Institute for Physico-Chemical Processes – Molecular Modelling Lab (Pisa), for fruitful interactions.

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References

  1. 1.
    Athanasas K, Magiatis P, Fokialakis N, Skaltsounis AL, Pratsinis H, Kletsas D (2004) J Nat Prod 67:973–977CrossRefGoogle Scholar
  2. 2.
    Singh IP, Bharate SB (2006) Nat Prod Rep 23:558–591CrossRefGoogle Scholar
  3. 3.
    Peuchen S, Bolanos JP, Heales SJR, Almeida A, Duchen MR, Clark JB (1997) Prog Neurobiol 52:261–281CrossRefGoogle Scholar
  4. 4.
    Facchinetti F, Dawson VL, Dawson TM (1998) Cell Mol Neurobiol 18:667–677CrossRefGoogle Scholar
  5. 5.
    Alagona G, Ghio C (2009) Phys Chem Chem Phys 11:776–790CrossRefGoogle Scholar
  6. 6.
    Chiodo SG, Leopoldini M, Russo N, Toscano M (2010) Phys Chem Chem Phys 12:7662–7670CrossRefGoogle Scholar
  7. 7.
    Leopoldini M, Prieto Pitarch I, Russo N, Toscano M (2004) J Phys Chem A 108:92–96CrossRefGoogle Scholar
  8. 8.
    Leopoldini M, Marino T, Russo N, Toscano M (2004) J Phys Chem A 108:4916–4922CrossRefGoogle Scholar
  9. 9.
    Leopoldini M, Marino T, Russo N, Toscano M (2004) Theor Chem Acc 111:210–216CrossRefGoogle Scholar
  10. 10.
    Leopoldini M, Russo N, Toscano M (2006) J Agric Food Chem 54:3078–3085CrossRefGoogle Scholar
  11. 11.
    Leopoldini M, Russo N, Toscano M (2007) J Agric Food Chem 55:7944–7949CrossRefGoogle Scholar
  12. 12.
    Leopoldini M, Russo N, Toscano M (2011) Food Chem 125:288–306CrossRefGoogle Scholar
  13. 13.
    Leopoldini M, Chiodo SG, Russo N, Toscano M (2011) J Chem Theory Comput 7:4218–4233CrossRefGoogle Scholar
  14. 14.
    Bentes ALA, Borges RS, Monteiro WR, Luiz G. M. de Macedo LGM, Alves CN (2011) Molecules 16: 1749–1760Google Scholar
  15. 15.
    Iuga C, Alvarez-Idaboy JR, Russo N (2012) J Org Chem 77:3868–3877CrossRefGoogle Scholar
  16. 16.
    Verotta L (2003) Phytochem Rev 1:389–407CrossRefGoogle Scholar
  17. 17.
    Kabanda MM., Mammino L (2012) Int J Quant Chem, doi: 10.1002/qua.24012
  18. 18.
    Mammino L, Kabanda MM (2009) J Mol Struct (THEOCHEM) 901:210–219CrossRefGoogle Scholar
  19. 19.
    Mammino L, Kabanda MM (2009) J Phys Chem A 113(52):15064–15077CrossRefGoogle Scholar
  20. 20.
    Alagona G, Ghio C (2009) J Phys Chem A 113:15206–15216CrossRefGoogle Scholar
  21. 21.
    Bryantsev VS, Diallo MS, Goddard WA III (2009) J Phys Chem A 113:9559–9567CrossRefGoogle Scholar
  22. 22.
    Bertrán J, Rodríguez-Santiago L, Sodupe M (1999) J Phys Chem B 103:2310–2317CrossRefGoogle Scholar
  23. 23.
    Sabolović J, Tautermann CS, Loerting T, Liedl KR (2003) Inorg Chem 42(7):2268–2279CrossRefGoogle Scholar
  24. 24.
    Hattori T, Toraishi T, Tsuneda T, Nagasaki S, Tanaka S (2005) J Phys Chem A 109:10403–10409CrossRefGoogle Scholar
  25. 25.
    Georgieva I, Trendafilova N, Rodríguez-Santiago L, Sodupe M (2005) J Phys Chem A 109:5668–5676CrossRefGoogle Scholar
  26. 26.
    Marino T, Toscano M, Russo N, Grand A (2006) J Phys Chem B 110:24666–24673CrossRefGoogle Scholar
  27. 27.
    Rimola A, Rodríguez-Santiago L, Ugliengo P, Sodupe M (2007) J Phys Chem B 111:5740–5747CrossRefGoogle Scholar
  28. 28.
    Lamsabhi AM, Alcamí M, Mó O, Yáñez M (2003) ChemPhysChem 4:1011–1016CrossRefGoogle Scholar
  29. 29.
    Lamsabhi AM, Alcamí M, Mó O, Yáñez M, Tortajada J (2004) ChemPhysChem 5:1871–1878CrossRefGoogle Scholar
  30. 30.
    Lamsabhi AM, Alcamí M, Mó O, Yáñez M, Tortajada J (2006) J Phys Chem A 110:1943–1950CrossRefGoogle Scholar
  31. 31.
    Lamsabhi AM, Alcamí M, Mó O, Yáñez M, Tortajada J, Salpin JY (2007) ChemPhysChem 8:181–187CrossRefGoogle Scholar
  32. 32.
    Noguera M, Bertrán J, Sodupe M (2008) J Phys Chem B 112:4817–4825CrossRefGoogle Scholar
  33. 33.
    Rickard GA, Gomez-Balderas R, Brunelle P, Raffa DF, Arvi Rauk A (2005) J Phys Chem A 109:8361–8370CrossRefGoogle Scholar
  34. 34.
    Becke AD (1992) J Chem Phys 96:9489CrossRefGoogle Scholar
  35. 35.
    Becke AD (1993) J Chem Phys 98:5648–5652CrossRefGoogle Scholar
  36. 36.
    Lee C, Yang W, Parr RG (1998) Phys Rev B 37:785–789CrossRefGoogle Scholar
  37. 37.
    Mammino L, Kabanda MM (2012) Molec Simul doi: 10.1080/08927022.2012.700483
  38. 38.
    Hay J, Wadt WR (1985) J Chem Phys 82(270):284–299Google Scholar
  39. 39.
    Siegbahn PEM (2003) Quarterly Rev Biophysics 36(1):91–145CrossRefGoogle Scholar
  40. 40.
    Siegbahn PE (2006) J Biol Inorg Chem 11(6):695–701CrossRefGoogle Scholar
  41. 41.
    Poater J, Solà M, Rimola A, Rodríguez-Santiago L, Sodupe M (2004) J Phys Chem A 108:6072–6078CrossRefGoogle Scholar
  42. 42.
    Leopoldini M, Chiodo S, Russo N, Toscano M (2006) J Agric Food Chem 54:6343–6351CrossRefGoogle Scholar
  43. 43.
    Belcastro M, Marino T, Russo N, Toscano M (2006) Theor Chem Acc 115:361–369CrossRefGoogle Scholar
  44. 44.
    Reed AE, Weinhold F (1983) J Chem Phys 78(6):4066–4074CrossRefGoogle Scholar
  45. 45.
    Reed AE, Weinhold F (1985) J Chem Phys 83(4):1736–1741CrossRefGoogle Scholar
  46. 46.
    Reed AE, Weinstock RB, Weinhold F (1985) J Chem Phys 83(2):735–747CrossRefGoogle Scholar
  47. 47.
    Carpenter JE, Weinhold F (1988) J Molec Struct (Theochem) 169:41–62CrossRefGoogle Scholar
  48. 48.
    Reed AE, Curtiss LA, Weinhold F (1988) Chem Rev 88(6):899–926CrossRefGoogle Scholar
  49. 49.
    Hertwig RH, Koch W, Schroder D, Schwarz H, Hrusak J, Schwerdtfeger P (1996) J Phys Chem 100:12253–12260CrossRefGoogle Scholar
  50. 50.
    Tomasi J, Persico M (1994) Chem Rev 94:2027–2094CrossRefGoogle Scholar
  51. 51.
    Tomasi J, Mennucci B, Cammi R (2005) Chem Rev 105:2999–3093CrossRefGoogle Scholar
  52. 52.
    Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Montgomery JA, Vreven T, Kudin KN, Burant JC, Millam JM, Iyengar SS, Tomasi J, Barone V, Mennucci B, Cossi M, Scalmani G, Rega N, Petersson GA, Nakatsuji H, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Klene M, Li X, Knox JE, Hratchian HP, Cross JB, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Ayala PY, Morokuma K, Voth GA, Salvador P, Dannenberg JJ, Zakrzewski VG, Dapprich S, Daniels AD, Strain MC, Farkas O, Malick DK, Rabuck AD, Raghavachari K, Foresman JB, Ortiz JV, Cui Q, Baboul AG, Clifford S, Cioslowski J, Stefanov BB, Liu G, Liashenko A, Piskorz P, Komaromi I, Martin RL, Fox DJ, Keith T, Al-Laham MA, Peng CY, Nanayakkara A, Challacombe M, Gill PMW, Johnson B, Chen W, Wong MW, Gonzalez C, Pople JA (2003) GAUSSIAN 03, version D 01. Gaussian, Inc., PittsburghGoogle Scholar
  53. 53.
    Mennucci B, Tomasi J (1997) J Chem Phys 106:5151–5158CrossRefGoogle Scholar
  54. 54.
    Mennucci B, Cancès E, Tomasi J (1997) J Phys Chem B 101:10506–10517CrossRefGoogle Scholar
  55. 55.
    Cancès E, Mennucci B, Tomasi J (1997) J Chem Phys 107:3032–3041CrossRefGoogle Scholar
  56. 56.
    Barone V, Cossi M, Tomasi J (1998) J Comput Chem 19:404–417CrossRefGoogle Scholar
  57. 57.
    Siboulet B, Marsden CJ, Vitorge P (2006) Chem Phys 326:289–296CrossRefGoogle Scholar
  58. 58.
    Bryantsev VS, Diallo MS, van Duin ACT, Goddard WA (2008) J Phys Chem A 112:9104–9112CrossRefGoogle Scholar
  59. 59.
    Bryantsev VS, Diallo MS, Goddard WA (2008) J Phys Chem B 112:9709–9719CrossRefGoogle Scholar
  60. 60.
    Spoliti M, Bencivenni L, Quirante JJ, Ramondo F (1997) J Mol Struct (THEOCHEM) 390:139–148CrossRefGoogle Scholar
  61. 61.
    Gilli P, Bertolasi V, Ferretti V, Gilli G (1994) J Am Chem Soc 116:909–915CrossRefGoogle Scholar
  62. 62.
    Sanz P, Mó O, Yañez M, Elguero J (2007) J Phys Chem A 111(18):3585–3591CrossRefGoogle Scholar
  63. 63.
    Mammino L, Kabanda MM (2012) Int J Quant Chem 112:2650–2658CrossRefGoogle Scholar

Copyright information

© Springer-Verlag Berlin Heidelberg 2012

Authors and Affiliations

  1. 1.Department of ChemistryUniversity of VendaThohoyandouSouth Africa

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