, Volume 17, Issue 2, pp 265–275

Cell sorting analysis of geographically separated hypersaline environments

  • Olga Zhaxybayeva
  • Ramunas Stepanauskas
  • Nikhil Ram Mohan
  • R. Thane Papke
Original Paper

DOI: 10.1007/s00792-013-0514-z

Cite this article as:
Zhaxybayeva, O., Stepanauskas, R., Mohan, N.R. et al. Extremophiles (2013) 17: 265. doi:10.1007/s00792-013-0514-z


Biogeography of microbial populations remains to be poorly understood, and a novel technique of single cell sorting promises a new level of resolution for microbial diversity studies. Using single cell sorting, we compared saturated NaCl brine environments (32–35 %) of the South Bay Salt Works in Chula Vista in California (USA) and Santa Pola saltern near Alicante (Spain). Although some overlap in community composition was detected, both samples were significantly different and included previously undiscovered 16S rRNA sequences. The community from Chula Vista saltern had a large bacterial fraction, which consisted of diverse Bacteroidetes and Proteobacteria. In contrast, Archaea dominated Santa Pola’s community and its bacterial fraction consisted of the previously known Salinibacter lineages. The recently reported group of halophilic Archaea, Nanohaloarchaea, was detected at both sites. We demonstrate that cell sorting is a useful technique for analysis of halophilic microbial communities, and is capable of identifying yet unknown or divergent lineages. Furthermore, we argue that observed differences in community composition reflect restricted dispersal between sites, a likely mechanism for diversification of halophilic microorganisms.


Haloarchaea Cell sorting Genome amplification Biogeography Nanohaloarchaea Prokaryotic speciation 

Supplementary material

792_2013_514_MOESM1_ESM.pdf (195 kb)
Supplementary material 1 (PDF 195 kb)
792_2013_514_MOESM2_ESM.eps (5 mb)
Supplementary material 2 (EPS 5140 kb)
792_2013_514_MOESM3_ESM.eps (1.8 mb)
Supplementary material 3 (EPS 1889 kb)

Copyright information

© Springer Japan 2013

Authors and Affiliations

  • Olga Zhaxybayeva
    • 1
  • Ramunas Stepanauskas
    • 2
  • Nikhil Ram Mohan
    • 3
  • R. Thane Papke
    • 3
  1. 1.Department of Biological SciencesDartmouth CollegeHanoverUSA
  2. 2.Bigelow Laboratory for Ocean SciencesEast BoothbayUSA
  3. 3.Department of Molecular and Cell BiologyUniversity of ConnecticutStorrsUSA

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