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Archives of Virology

, Volume 162, Issue 6, pp 1769–1772 | Cite as

Complete nucleotide sequence and genome organization of peach virus D, a putative new member of the genus Marafivirus

  • Davaajargal Igori
  • Seungmo Lim
  • Dasom Baek
  • San Yeong Kim
  • Euncheol Seo
  • In-Sook Cho
  • Gug-Seoun Choi
  • Hyoun-Sub Lim
  • Jae Sun MoonEmail author
Annotated Sequence Record

Abstract

The complete nucleotide sequence of peach virus D (PeVD) from Prunus persica was determined. The PeVD genome consists of 6,612 nucleotides excluding the 3’ poly(A) tail and contains a single open reading frame coding for a polyprotein of 227 kDa. Sequence comparisons and phylogenetic analysis revealed that PeVD is most closely related to viruses in the genus Marafivirus, family Tymoviridae. The complete nucleotide and CP amino acid sequences of PeVD were most similar (51.1–57.8% and 32.2–48.0%, respectively) to members of the genus Marafivirus, suggesting that PeVD is a new member of this genus.

Keywords

Complete Nucleotide Sequence Ringspot Virus Apple Chlorotic Leaf Spot Virus Turnip Yellow Mosaic Virus Prune Dwarf Virus 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Notes

Acknowledgements

This research was carried out with the support of “Cooperative Research Program for Agriculture Science & Technology Development (Project No. PJ01252403),” Rural Development Administration, Republic of Korea.

Compliance with ethical standards

Conflict of interest

The authors declare that they have no conflict of interest.

Ethical approval

This article does not contain any studies with animals or human participants performed by any of the authors.

Supplementary material

705_2017_3255_MOESM1_ESM.docx (29 kb)
Supplementary material 1 (DOCX 28 kb)

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Copyright information

© Springer-Verlag Wien 2017

Authors and Affiliations

  1. 1.Biosystems and Bioengineering ProgramUniversity of Science and TechnologyDaejeonRepublic of Korea
  2. 2.Plant Systems Engineering Research CenterKorea Research Institute of Bioscience and BiotechnologyDaejeonRepublic of Korea
  3. 3.Cheongdo Peach Research InstituteGyeongsangbuk-do Agricultural Research and Extension ServicesCheongdoRepublic of Korea
  4. 4.Horticultural and Herbal Crop Environment DivisionNational Institute of Horticultural and Herbal Science, Rural Development AdministrationWanjuRepublic of Korea
  5. 5.Department of Applied BiologyChungnam National UniversityDaejeonRepublic of Korea

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