Archives of Virology

, Volume 157, Issue 4, pp 635–645 | Cite as

SARS-CoV nucleocapsid protein interacts with cellular pyruvate kinase protein and inhibits its activity

  • Wei-Yen Wei
  • Hui-Chun Li
  • Chiung-Yao Chen
  • Chee-Hing Yang
  • Shen-Kao Lee
  • Chia-Wen Wang
  • Hsin-Chieh Ma
  • Yue-Li Juang
  • Shih-Yen Lo
Original Article

Abstract

The pathogenesis of SARS-CoV remains largely unknown. To study the function of the SARS-CoV nucleocapsid protein, we have conducted a yeast two-hybrid screening experiment to identify cellular proteins that may interact with the SARS-CoV nucleocapsid protein. Pyruvate kinase (liver) was found to interact with SARS-CoV nucleocapsid protein in this experiment. The binding domains of these two proteins were also determined using the yeast two-hybrid system. The physical interaction between the SARS-CoV nucleocapsid and cellular pyruvate kinase (liver) proteins was further confirmed by GST pull-down assay, co-immunoprecipitation assay and confocal microscopy. Cellular pyruvate kinase activity in hepatoma cells was repressed by SARS-CoV nucleocapsid protein in either transiently transfected or stably transfected cells. PK deficiency in red blood cells is known to result in human hereditary non-spherocytic hemolytic anemia. It is reasonable to assume that an inhibition of PKL activity due to interaction with SARS-CoV N protein is likely to cause the death of the hepatocytes, which results in the elevation of serum alanine aminotransferase and liver dysfunction noted in most SARS patients. Thus, our results suggest that SARS-CoV could reduce pyruvate kinase activity via its nucleocapsid protein, and this may in turn cause disease.

Keywords

Pyruvate Kinase HuH7 Cell Severe Acute Respiratory Syndrome Pyruvate Kinase Activity Murine Hepatitis Virus Type 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Notes

Acknowledgments

We thank Dr. Li-Kuang Chen for providing SARS-CoV cDNA. RNAi reagents were obtained from the National RNAi Core Facility located at the Institute of Molecular Biology/Genomic Research Center, Academia Sinica, supported by grants from the NSC National Research Program for Genomic Medicine (NSC 94-3112-B-001-003 and NSC 94-3112-B-001-018-Y). This work was supported by grants from the National Science Council of Taiwan (NSC 98-2320-B-320-001-MY3) and from the Tzu Chi University (TCIRP96004-05) to Dr. Shih-Yen Lo.

References

  1. 1.
    Alvarez E, DeDiego ML, Nieto-Torres JL, Jimenez-Guardeno JM, Marcos-Villar L, Enjuanes L (2010) The envelope protein of severe acute respiratory syndrome coronavirus interacts with the non-structural protein 3 and is ubiquitinated. Virology 402:281–291PubMedCrossRefGoogle Scholar
  2. 2.
    Chan-Yeung M, Yu WC (2003) Outbreak of severe acute respiratory syndrome in Hong Kong special administrative region: case report. BMJ 326:850–852PubMedCrossRefGoogle Scholar
  3. 3.
    Chan HL, Kwan AC, To KF, Lai ST, Chan PK, Leung WK, Lee N, Wu A, Sung JJ (2005) Clinical significance of hepatic derangement in severe acute respiratory syndrome. World J Gastroenterol 11:2148–2153PubMedGoogle Scholar
  4. 4.
    Chau TN, Lee KC, Yao H, Tsang TY, Chow TC, Yeung YC, Choi KW, Tso YK, Lau T, Lai ST, Lai CL (2004) SARS-associated viral hepatitis caused by a novel coronavirus: report of three cases. Hepatology 39:302–310PubMedCrossRefGoogle Scholar
  5. 5.
    Chen SC, Lo SY, Ma HC, Li HC (2009) Expression and membrane integration of SARS-CoV E protein and its interaction with M protein. Virus Genes 38:365–371PubMedCrossRefGoogle Scholar
  6. 6.
    Cui HJ, Tong XL, Li P, Hao YX, Chen XG, Li AG, Zhang ZY, Duan J, Zhen M, Zhang B, Hua CJ, Gong YW (2004) Serum hepatic enzyme manifestations in patients with severe acute respiratory syndrome: retrospective analysis. World J Gastroenterol 10:1652–1655PubMedGoogle Scholar
  7. 7.
    Ding Y, Wang H, Shen H, Li Z, Geng J, Han H, Cai J, Li X, Kang W, Weng D, Lu Y, Wu D, He L, Yao K (2003) The clinical pathology of severe acute respiratory syndrome (SARS): a report from China. J Pathol 200:282–289PubMedCrossRefGoogle Scholar
  8. 8.
    Enserink M (2003) Infectious diseases. Clues to the animal origins of SARS. Science 300:1351PubMedCrossRefGoogle Scholar
  9. 9.
    Farcas GA, Poutanen SM, Mazzulli T, Willey BM, Butany J, Asa SL, Faure P, Akhavan P, Low DE, Kain KC (2005) Fatal severe acute respiratory syndrome is associated with multiorgan involvement by coronavirus. J Infect Dis 191:193–197PubMedCrossRefGoogle Scholar
  10. 10.
    Feksa LR, Cornelio A, Dutra-Filho CS, De Souza Wyse AT, Wajner M, Wannmacher CM (2004) Inhibition of pyruvate kinase activity by cystine in brain cortex of rats. Brain Res 1012:93–100PubMedCrossRefGoogle Scholar
  11. 11.
    Frieman MB, Chen J, Morrison TE, Whitmore A, Funkhouser W, Ward JM, Lamirande EW, Roberts A, Heise M, Subbarao K, Baric RS (2010) SARS-CoV pathogenesis is regulated by a STAT1 dependent but a type I, II and III interferon receptor independent mechanism. PLoS Pathog 6:e1000849PubMedCrossRefGoogle Scholar
  12. 12.
    Gu J, Gong E, Zhang B, Zheng J, Gao Z, Zhong Y, Zou W, Zhan J, Wang S, Xie Z, Zhuang H, Wu B, Zhong H, Shao H, Fang W, Gao D, Pei F, Li X, He Z, Xu D, Shi X, Anderson VM, Leong AS (2005) Multiple organ infection and the pathogenesis of SARS. J Exp Med 202:415–424PubMedCrossRefGoogle Scholar
  13. 13.
    Guo Y, Korteweg C, McNutt MA, Gu J (2008) Pathogenetic mechanisms of severe acute respiratory syndrome. Virus Res 133:4–12PubMedCrossRefGoogle Scholar
  14. 14.
    He R, Leeson A, Andonov A, Li Y, Bastien N, Cao J, Osiowy C, Dobie F, Cutts T, Ballantine M, Li X (2003) Activation of AP-1 signal transduction pathway by SARS coronavirus nucleocapsid protein. Biochem Biophys Res Commun 311:870–876PubMedCrossRefGoogle Scholar
  15. 15.
    Hofmann H, Hattermann K, Marzi A, Gramberg T, Geier M, Krumbiegel M, Kuate S, Uberla K, Niedrig M, Pohlmann S (2004) S protein of severe acute respiratory syndrome-associated coronavirus mediates entry into hepatoma cell lines and is targeted by neutralizing antibodies in infected patients. J Virol 78:6134–6142PubMedCrossRefGoogle Scholar
  16. 16.
    Hsieh YC, Li HC, Chen SC, Lo SY (2008) Interactions between M protein and other structural proteins of severe, acute respiratory syndrome-associated coronavirus. J Biomed Sci 15:707–717PubMedCrossRefGoogle Scholar
  17. 17.
    Jurica MS, Mesecar A, Heath PJ, Shi W, Nowak T, Stoddard BL (1998) The allosteric regulation of pyruvate kinase by fructose-1, 6-bisphosphate. Structure 6:195–210PubMedCrossRefGoogle Scholar
  18. 18.
    Lai MM (2003) SARS virus: the beginning of the unraveling of a new coronavirus. J Biomed Sci 10:664–675PubMedCrossRefGoogle Scholar
  19. 19.
    Lang ZW, Zhang LJ, Zhang SJ, Meng X, Li JQ, Song CZ, Sun L, Zhou YS, Dwyer DE (2003) A clinicopathological study of three cases of severe acute respiratory syndrome (SARS). Pathology 35:526–531PubMedCrossRefGoogle Scholar
  20. 20.
    Lee YN, Chen LK, Ma HC, Yang HH, Li HP, Lo SY (2005) Thermal aggregation of SARS-CoV membrane protein. J Virol Methods 129:152–161PubMedCrossRefGoogle Scholar
  21. 21.
    Luo H, Ye F, Chen K, Shen X, Jiang H (2005) SR-rich motif plays a pivotal role in recombinant SARS coronavirus nucleocapsid protein multimerization. Biochemistry 44:15351–15358PubMedCrossRefGoogle Scholar
  22. 22.
    Ma HC, Fang CP, Hsieh YC, Chen SC, Li HC, Lo SY (2008) Expression and membrane integration of SARS-CoV M protein. J Biomed Sci 15:301–310PubMedCrossRefGoogle Scholar
  23. 23.
    Ma HC, Lin TW, Li H, Iguchi-Ariga SM, Ariga H, Chuang YL, Ou JH, Lo SY (2008) Hepatitis C virus ARFP/F protein interacts with cellular MM-1 protein and enhances the gene trans-activation activity of c-Myc. J Biomed Sci 15:417–425PubMedCrossRefGoogle Scholar
  24. 24.
    Marra MA, Jones SJ, Astell CR, Holt RA, Brooks-Wilson A, Butterfield YS, Khattra J, Asano JK, Barber SA, Chan SY, Cloutier A, Coughlin SM, Freeman D, Girn N, Griffith OL, Leach SR, Mayo M, McDonald H, Montgomery SB, Pandoh PK, Petrescu AS, Robertson AG, Schein JE, Siddiqui A, Smailus DE, Stott JM, Yang GS, Plummer F, Andonov A, Artsob H, Bastien N, Bernard K, Booth TF, Bowness D, Czub M, Drebot M, Fernando L, Flick R, Garbutt M, Gray M, Grolla A, Jones S, Feldmann H, Meyers A, Kabani A, Li Y, Normand S, Stroher U, Tipples GA, Tyler S, Vogrig R, Ward D, Watson B, Brunham RC, Krajden M, Petric M, Skowronski DM, Upton C, Roper RL (2003) The Genome sequence of the SARS-associated coronavirus. Science 300:1399–1404PubMedCrossRefGoogle Scholar
  25. 25.
    Munoz ME, Ponce E (2003) Pyruvate kinase: current status of regulatory and functional properties. Comp Biochem Physiol B Biochem Mol Biol 135:197–218PubMedCrossRefGoogle Scholar
  26. 26.
    Ning Q, Liu M, Kongkham P, Lai MM, Marsden PA, Tseng J, Pereira B, Belyavskyi M, Leibowitz J, Phillips MJ, Levy G (1999) The nucleocapsid protein of murine hepatitis virus type 3 induces transcription of the novel fgl2 prothrombinase gene. J Biol Chem 274:9930–9936PubMedCrossRefGoogle Scholar
  27. 27.
    Peiris JS, Lai ST, Poon LL, Guan Y, Yam LY, Lim W, Nicholls J, Yee WK, Yan WW, Cheung MT, Cheng VC, Chan KH, Tsang DN, Yung RW, Ng TK, Yuen KY (2003) Coronavirus as a possible cause of severe acute respiratory syndrome. Lancet 361:1319–1325PubMedCrossRefGoogle Scholar
  28. 28.
    Poon LL, Guan Y, Nicholls JM, Yuen KY, Peiris JS (2004) The aetiology, origins, and diagnosis of severe acute respiratory syndrome. Lancet Infect Dis 4:663–671PubMedCrossRefGoogle Scholar
  29. 29.
    Presek P, Reinacher M, Eigenbrodt E (1988) Pyruvate kinase type M2 is phosphorylated at tyrosine residues in cells transformed by Rous sarcoma virus. FEBS Lett 242:194–198PubMedCrossRefGoogle Scholar
  30. 30.
    Rota PA, Oberste MS, Monroe SS, Nix WA, Campagnoli R, Icenogle JP, Penaranda S, Bankamp B, Maher K, Chen MH, Tong S, Tamin A, Lowe L, Frace M, DeRisi JL, Chen Q, Wang D, Erdman DD, Peret TC, Burns C, Ksiazek TG, Rollin PE, Sanchez A, Liffick S, Holloway B, Limor J, McCaustland K, Olsen-Rasmussen M, Fouchier R, Gunther S, Osterhaus AD, Drosten C, Pallansch MA, Anderson LJ, Bellini WJ (2003) Characterization of a novel coronavirus associated with severe acute respiratory syndrome. Science 300:1394–1399PubMedCrossRefGoogle Scholar
  31. 31.
    Satija N, Lal SK (2007) The molecular biology of SARS coronavirus. Ann NY Acad Sci 1102:26–38PubMedCrossRefGoogle Scholar
  32. 32.
    Shi X, Gong E, Gao D, Zhang B, Zheng J, Gao Z, Zhong Y, Zou W, Wu B, Fang W, Liao S, Wang S, Xie Z, Lu M, Hou L, Zhong H, Shao H, Li N, Liu C, Pei F, Yang J, Wang Y, Han Z, Zhang Q, You J, Zhu X, Gu J (2005) Severe acute respiratory syndrome associated coronavirus is detected in intestinal tissues of fatal cases. Am J Gastroenterol 100:169–176PubMedCrossRefGoogle Scholar
  33. 33.
    Surjit M, Liu B, Jameel S, Chow VT, Lal SK (2004) The SARS coronavirus nucleocapsid protein induces actin reorganization and apoptosis in COS-1 cells in the absence of growth factors. Biochem J 383:13–18PubMedCrossRefGoogle Scholar
  34. 34.
    Surjit M, Liu B, Kumar P, Chow VT, Lal SK (2004) The nucleocapsid protein of the SARS coronavirus is capable of self-association through a C-terminal 209 amino acid interaction domain. Biochem Biophys Res Commun 317:1030–1036PubMedCrossRefGoogle Scholar
  35. 35.
    Surjit M, Lal SK (2008) The SARS-CoV nucleocapsid protein: a protein with multifarious activities. Infect Genet Evol 8:397–405PubMedCrossRefGoogle Scholar
  36. 36.
    Tan YJ, Lim SG, Hong W (2005) Characterization of viral proteins encoded by the SARS-coronavirus genome. Antiviral Res 65:69–78PubMedCrossRefGoogle Scholar
  37. 37.
    Teoh KT, Siu YL, Chan WL, Schluter MA, Liu CJ, Peiris JS, Bruzzone R, Margolis B, Nal B (2010) The SARS coronavirus E protein interacts with PALS1 and alters tight junction formation and epithelial morphogenesis. Mol Biol Cell 21:3838–3852PubMedCrossRefGoogle Scholar
  38. 38.
    Valentini G, Chiarelli LR, Fortin R, Dolzan M, Galizzi A, Abraham DJ, Wang C, Bianchi P, Zanella A, Mattevi A (2002) Structure and function of human erythrocyte pyruvate kinase. Molecular basis of nonspherocytic hemolytic anemia. J Biol Chem 277:23807–23814PubMedCrossRefGoogle Scholar
  39. 39.
    Wang C, Chiarelli LR, Bianchi P, Abraham DJ, Galizzi A, Mattevi A, Zanella A, Valentini G (2001) Human erythrocyte pyruvate kinase: characterization of the recombinant enzyme and a mutant form (R510Q) causing nonspherocytic hemolytic anemia. Blood 98:3113–3120PubMedCrossRefGoogle Scholar
  40. 40.
    Wang H, Rao S, Jiang C (2007) Molecular pathogenesis of severe acute respiratory syndrome. Microbes Infect 9:119–126PubMedCrossRefGoogle Scholar
  41. 41.
    Wang Q, Li C, Zhang Q, Wang T, Li J, Guan W, Yu J, Liang M, Li D (2010) Interactions of SARS coronavirus nucleocapsid protein with the host cell proteasome subunit p42. Virol J 7:99PubMedCrossRefGoogle Scholar
  42. 42.
    Wang SM, Wang CT (2009) APOBEC3G cytidine deaminase association with coronavirus nucleocapsid protein. Virology 388:112–120PubMedCrossRefGoogle Scholar
  43. 43.
    Wu KL, Lu SN, Changchien CS, Chiu KW, Kuo CH, Chuah SK, Liu JW, Lin MC, Eng HL, Chen SS, Lee CM, Chen CL (2004) Sequential changes of serum aminotransferase levels in patients with severe acute respiratory syndrome. Am J Trop Med Hyg 71:125–128PubMedGoogle Scholar
  44. 44.
    Wu X, Zhou Y, Zhang K, Liu Q, Guo D (2008) Isoform-specific interaction of pyruvate kinase with hepatitis C virus NS5B. FEBS Lett 582:2155–2160PubMedCrossRefGoogle Scholar
  45. 45.
    Xiao Y, Meng Q, Yin X, Guan Y, Liu Y, Li C, Wang M, Liu G, Tong T, Wang LF, Kong X, Wu D (2008) Pathological changes in masked palm civets experimentally infected by severe acute respiratory syndrome (SARS) coronavirus. J Comp Pathol 138:171–179PubMedCrossRefGoogle Scholar
  46. 46.
    Yang CH, Li HC, Jiang JG, Hsu CF, Wang YJ, Lai MJ, Juang YL, Lo SY (2010) Enterovirus type 71 2A protease functions as a transcriptional activator in yeast. J Biomed Sci 17:65PubMedCrossRefGoogle Scholar
  47. 47.
    Yang Z, Xu M, Yi JQ, Jia WD (2005) Clinical characteristics and mechanism of liver damage in patients with severe acute respiratory syndrome. Hepatobiliary Pancreat Dis Int 4:60–63PubMedGoogle Scholar
  48. 48.
    Yeung KS, Meanwell NA (2007) Recent developments in the virology and antiviral research of severe acute respiratory syndrome coronavirus. Infect Disord Drug Targets 7:29–41PubMedCrossRefGoogle Scholar
  49. 49.
    You J, Dove BK, Enjuanes L, DeDiego ML, Alvarez E, Howell G, Heinen P, Zambon M, Hiscox JA (2005) Subcellular localization of the severe acute respiratory syndrome coronavirus nucleocapsid protein. J Gen Virol 86:3303–3310PubMedCrossRefGoogle Scholar
  50. 50.
    Yu IM, Gustafson CL, Diao J, Burgner JW 2nd, Li Z, Zhang J, Chen J (2005) Recombinant severe acute respiratory syndrome (SARS) coronavirus nucleocapsid protein forms a dimer through its C-terminal domain. J Biol Chem 280:23280–23286PubMedCrossRefGoogle Scholar
  51. 51.
    Zhang X, Wu K, Wang D, Yue X, Song D, Zhu Y, Wu J (2007) Nucleocapsid protein of SARS-CoV activates interleukin-6 expression through cellular transcription factor NF-kappaB. Virology 365:324–335PubMedCrossRefGoogle Scholar
  52. 52.
    Zhang YP, Zhang RW, Chang WS, Wang YY (2010) Cxcl16 interact with SARS-CoV N protein in and out cell. Virol Sin 25:369–374PubMedCrossRefGoogle Scholar
  53. 53.
    Zhao X, Nicholls JM, Chen YG (2008) Severe acute respiratory syndrome-associated coronavirus nucleocapsid protein interacts with Smad3 and modulates transforming growth factor-beta signaling. J Biol Chem 283:3272–3280PubMedCrossRefGoogle Scholar
  54. 54.
    Zhou B, Liu J, Wang Q, Liu X, Li X, Li P, Ma Q, Cao C (2008) The nucleocapsid protein of severe acute respiratory syndrome coronavirus inhibits cell cytokinesis and proliferation by interacting with translation elongation factor 1alpha. J Virol 82:6962–6971PubMedCrossRefGoogle Scholar
  55. 55.
    Zwerschke W, Mazurek S, Massimi P, Banks L, Eigenbrodt E, Jansen-Durr P (1999) Modulation of type M2 pyruvate kinase activity by the human papillomavirus type 16 E7 oncoprotein. Proc Natl Acad Sci USA 96:1291–1296PubMedCrossRefGoogle Scholar

Copyright information

© Springer-Verlag 2012

Authors and Affiliations

  • Wei-Yen Wei
    • 1
  • Hui-Chun Li
    • 1
    • 2
  • Chiung-Yao Chen
    • 1
  • Chee-Hing Yang
    • 3
  • Shen-Kao Lee
    • 3
  • Chia-Wen Wang
    • 3
  • Hsin-Chieh Ma
    • 2
  • Yue-Li Juang
    • 1
    • 2
  • Shih-Yen Lo
    • 1
    • 2
    • 3
    • 4
  1. 1.Graduate Institute of Molecular and Cellular BiologyTzu Chi UniversityHualienTaiwan
  2. 2.Graduate Institute of Medical SciencesTzu Chi UniversityHualienTaiwan
  3. 3.Graduate Institute of Medical BiotechnologyTzu Chi UniversityHualienTaiwan
  4. 4.Department of Laboratory MedicineBuddhist Tzu Chi General HospitalHualienTaiwan

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