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Archives of Virology

, 156:2101 | Cite as

Molecular characterization of a new strain of sugarcane streak mosaic virus (SCSMV)

  • Wenfeng Li
  • Zhen He
  • Shifang LiEmail author
  • Yingkun Huang
  • Zhixiang Zhang
  • Dongmei Jiang
  • Xiaoyan Wang
  • Zhiming Luo
Annotated Sequence Record

Abstract

The complete nucleotide sequences of three sugarcane streak mosaic virus (SCSMV) isolates found in sugarcane plants imported from Japan (JP1, JP2) and Indonesia (ID) into China were determined. Sequence analysis showed that, based on the whole genome sequence and the nucleotide sequences encoding the ten mature proteins, the three SCSMV isolates shared identities of 81.62%-81.67% and 76.39%-85.93%, respectively, with a Pakistan (PAK) isolate of SCSMV. Phylogenetic analysis indicated that SCSMV-JP1, -JP2 and -ID were clustered in a subgroup separate from the previously described SCSMV-PAK and -India isolates, and may thus represent a new strain of SCSMV.

Keywords

Mosaic Virus Maize Dwarf Mosaic Virus Sugarcane Mosaic Virus Coat Protein Gene Sequence Sugarcane Disease 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Notes

Acknowledgments

This work was supported by grants from the National Basic Research and Development Program of China (973 Program) (No. 2009CB119200), the National Natural Science Foundation of China (Nos. 30771403, 30970134 and 31071765), the Earmarked Fund for China Agriculture Research System (CARS-20-2-2), the Earmarked Fund for Yunnan province Agriculture Research System, the Opening Project of State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences (SKL2010OP14) and NSFC-JSPS Joint Research Project between China and Japan (No. 30811140157).

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Copyright information

© Springer-Verlag 2011

Authors and Affiliations

  • Wenfeng Li
    • 1
    • 2
  • Zhen He
    • 2
  • Shifang Li
    • 2
    Email author
  • Yingkun Huang
    • 1
  • Zhixiang Zhang
    • 2
  • Dongmei Jiang
    • 2
  • Xiaoyan Wang
    • 1
  • Zhiming Luo
    • 1
  1. 1.Yunnan Key Laboratory of Sugarcane Genetic Improvement, Sugarcane Research InstituteYunnan Academy of Agricultural SciencesKaiyuanPeople’s Republic of China
  2. 2.State Key Laboratory of Biology of Plant Diseases and Insect Pests, Institute of Plant ProtectionChinese Academy of Agricultural SciencesBeijingPeople’s Republic of China

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