Plant Systematics and Evolution

, Volume 262, Issue 1–2, pp 75–87

Development of PCR-based chloroplast DNA markers that characterize domesticated cowpea (Vigna unguiculata ssp. unguiculata var. unguiculata) and highlight its crop-weed complex


DOI: 10.1007/s00606-006-0475-0

Cite this article as:
Feleke, Y., Pasquet, R.S. & Gepts, P. Plant Syst. Evol. (2006) 262: 75. doi:10.1007/s00606-006-0475-0


In 1992, Vaillancourt and Weeden discovered a very important mutation for studying cowpea evolution and domestication. A loss of a BamHI restriction site in chloroplast DNA characterized all domesticated accessions and a few wild (Vigna unguiculata ssp. unguiculata var. spontanea) accessions. In order to screen a larger number of accessions, primers were designed to check this mutation using PCR RFLP or direct PCR methods. Using these new primers, 54 domesticated cowpea accessions and 130 accessions from the wild progenitor were screened. The absence of haplotype 0 was confirmed within domesticated accessions, including primitive landraces from cultivar-groups Biflora and Textilis, suggesting that this mutation occurred prior to domestication. However, 40 var. spontanea accessions distributed from Senegal to Tanzania and South Africa showed haplotype 1. Whereas this marker could not be used to identify a precise center of origin, it did highlight the widely distributed cowpea crop-weed complex. Its very high frequency in West Africa could be interpreted as a result of either genetic swamping of the wild/weedy gene pool by the domesticated cowpea gene pool or as the result of domestication by ethnic groups focusing primarily on cowpea as fodder.


cowpea Vigna unguiculata chloroplast DNA long-range PCR gene flow crop-weedy-wild complex 

Copyright information

© Springer-Verlag Wien 2006

Authors and Affiliations

  1. 1.Department of Plant Sciences/MS1, Section of Crop and Ecosystem SciencesUniversity of CaliforniaDavisUSA
  2. 2.IRD (Département Ressources Vivantes) Paris Cedex 10France
  3. 3.ICIPENairobiKenya

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