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Planta

, Volume 222, Issue 5, pp 832–847 | Cite as

Isogene specific oligo arrays reveal multifaceted changes in gene expression during grape berry (Vitis vinifera L.) development

  • Nancy Terrier
  • David Glissant
  • Jérôme Grimplet
  • François Barrieu
  • Philippe Abbal
  • Carole Couture
  • Agnès Ageorges
  • Rossitza Atanassova
  • Céline Léon
  • Jean-Pierre Renaudin
  • Fabienne Dédaldéchamp
  • Charles RomieuEmail author
  • Serge Delrot
  • Saïd Hamdi
Original Article

Abstract

The transition from a green, hard, and acidic pericarp to a sweet, soft, coloured, and sugar-rich ripe fruit occurs in many unrelated fruit species. High throughput identification of differentially expressed genes in grape berry has been achieved by the use of 50-mers oligoarrays bearing a set of 3,200 Unigenes from Vitis vinifera to compare berry transcriptome at nine developmental stages. Analysis of transcript profiles revealed that most activations were triggered simultaneously with softening, occurring within only 24 h for an individual berry, just before any change in colouration or water, sugar, and acid content can be detected. Although most dramatically induced genes belong to unknown functional categories, numerous changes occur in the expression of isogenes involved in primary and secondary metabolism during ripening. Focusing on isogenes potentially significant in development regulation (hormonal control of transcription factor) revealed a possible role for several hormones (cytokinin, gibberellin, or jasmonic acid). Transcription factor analysis revealed the induction of RAP2 and WRKY genes at véraison, suggesting increasing biotic and abiotic stress conditions during ripening. This observation was strengthened by an increased expression of multiple transcripts involved in sugar metabolism and also described as induced in other plant organs during stress conditions. This approach permitted the identification of new isogenes as possible control points: a glutathione S-transferase exhibits the same expression profile as anthocyanin accumulation and a new putative sugar transporter is induced in parallel with sugar import.

Keywords

Anthocyanin Fruit Ripening Sugar Vitis 

Abbreviations

EST

Expressed sequence tag

GRIP

Grape ripening induced protein

UGFT

UDP glucose-flavonoid 3-O-glucosyl transferase

Notes

Acknowledgements

This research was supported by a Genoplant grant n° CI 2001003 entitled “Grapevine genomics: Grape berry development and ripening, transcriptomic analysis and identification of interest genes”.

Supplementary material

425_2005_17_MOESM1_ESM.pdf (1.1 mb)
Supplementary material

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Copyright information

© Springer-Verlag 2005

Authors and Affiliations

  • Nancy Terrier
    • 1
  • David Glissant
    • 2
  • Jérôme Grimplet
    • 1
  • François Barrieu
    • 3
  • Philippe Abbal
    • 1
  • Carole Couture
    • 3
  • Agnès Ageorges
    • 1
  • Rossitza Atanassova
    • 2
  • Céline Léon
    • 3
  • Jean-Pierre Renaudin
    • 3
  • Fabienne Dédaldéchamp
    • 2
  • Charles Romieu
    • 1
    Email author
  • Serge Delrot
    • 2
  • Saïd Hamdi
    • 3
  1. 1.Unité Mixte de Recherche S.P.O.Biologie Intégrative de la Vigne et du Raisin, I.N.R.A.Montpellier Cedex 1France
  2. 2.Unité Mixte de Recherche C.N.R.S. 6161, Transport des AssimilatsUniversité de Poitiers, Laboratoire de Physiologie, Biochimie et Biologie Moléculaire VégétalesPoitiersFrance
  3. 3.UMR 619, Equipe Biologie de la VigneUniversité de Bordeaux 1Villenave d’Ornon CedexFrance

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