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International Journal of Legal Medicine

, Volume 132, Issue 5, pp 1305–1307 | Cite as

Genetic data for 26 autosomal STR markers from Brazilian population

  • Tamiris Fátima Correia Pereira
  • Marcelo Malaghini
  • João Carlos Maciel Magalhães
  • Rodrigo Moura-Neto
  • Vanessa Santos Sotomaior
Population Data

Abstract

The allelic frequency distributions and statistical forensic parameters of 26 mini short tandem repeat (mini-STR) loci in a sample of 1575 unrelated individuals from five different Brazilian regions were obtained. All the analyzed loci showed great diversity and were highly informative. The results were compared with those of the US Caucasian, African American, and Hispanic population studies. This study aimed to contribute to forensic analysis for human identification and inference of the evidential value in familial bond tests.

Keywords

Short tandem repeats Genetic distribution Brazilian populations 

Supplementary material

414_2018_1777_MOESM1_ESM.docx (31 kb)
Table S1 (DOCX 31 kb)
414_2018_1777_MOESM2_ESM.docx (13 kb)
Table S2 (DOCX 12 kb)

References

  1. 1.
    Hill CR, Kline MC, Coble MD, Butler JM (2008) Characterization of 26 miniSTR loci for improved analysis of degraded DNA samples. J Forensic Sci 53(1):73–80.  https://doi.org/10.1111/j.1556-4029.2008.00595.x CrossRefPubMedGoogle Scholar
  2. 2.
    Godinho NMO, Gontijo CC, Diniz MECG, Falcão-Alencar G, Dalton GC, Amorim CEG, Barcelos RSS, Klautau-Guimarães MN, Oliveira SF (2008) Regional patterns of genetic admixture in South America. Forensic Sci Int: Genet Ser 1:329–330Google Scholar
  3. 3.
    Raimann PE, Hirschfeld-Campolongo G, Schumacher S, de Mattos Almeida SE, da Silva CM, Rodenbusch R, Bassini AS, de Souza LF, Nascimento EC, de Oliveira ES, Santos VR, de Oliveira EC, Auler-Bittencourt EA, da RochaHirschfeld-Campolongo RC, Sousa MLE, de Figueiredo HP, de Figueiredo BB, Silva R, Moura-Neto RS (2012) Population genetic analyses of the AmpFlSTR® NGM™ in Brazil. Int J Legal Med 126(2):337–341.  https://doi.org/10.1007/s00414-011-0606-1 CrossRefPubMedGoogle Scholar
  4. 4.
    Polski JM, Kimzey S, Percival RW, Grosso LE (1998) Rapid and effective processing of blood specimens for diagnostic PCR using filter paper and Chelex-100. J Clin Pathol-Mol Pathol 51:215–217CrossRefGoogle Scholar
  5. 5.
    Hill CR, Butler JM, Vallone PM (2009) A 26plex autosomal STR assay to aid human identity testing. J Forensic Sci 54(5):1008–1011.  https://doi.org/10.1111/j.1556-4029.2009.01110.x CrossRefPubMedGoogle Scholar
  6. 6.
    Excoffier L, Laval GG, Schneider S (2005) Arlequin version 3.1: an integrated software package for population genetics data analysis. Evol Bioinform 1:47–50CrossRefGoogle Scholar
  7. 7.
    Butler JM (2015) Advanced topics in forensic DNA typing: interpretation, 1st Edition, 232Google Scholar
  8. 8.
    Butler JM (2005) Forensic DNA typing, 2nd Edition, 489-491Google Scholar
  9. 9.
    Ota T (1993) DISPAN: genetic distance and phylogenetic analysis. Institute of Molecular Evolutionary Genetics, Pennsylvania State UniversityGoogle Scholar
  10. 10.
    Holsinger KE, Weir SB (2009) Genetics in geographically structured populations: defining, estimating and interpreting Fst. Nature Rev Genet 10(9):639–650.  https://doi.org/10.1038/nrg2611 CrossRefPubMedGoogle Scholar
  11. 11.
    Kane N (2011) Should I use Fst, G’st or D? The Mol Ecol, accessed http://www.molecularecologist.com/2011/03/should-i-use-fst-gst-or-d-2/
  12. 12.
    Hill R, Butler JM, Coble MD (2006) Allele frequencies for 26 miniSTR loci with U.S. Caucasian, African American, and Hispanic populations, accessed http://www.cstl.nist.gov/biotech/strbase/NISTpopdata/Allele_Frequencies_for_26miniSTRs.pdf
  13. 13.
    Micaela P, Thomas B, Heidi P (2012) The publication of population genetic data in the International Journal of Legal Medicine: guidelines. Int J Legal Med 126:489–490CrossRefGoogle Scholar

Copyright information

© Springer-Verlag GmbH Germany, part of Springer Nature 2018

Authors and Affiliations

  • Tamiris Fátima Correia Pereira
    • 1
  • Marcelo Malaghini
    • 2
  • João Carlos Maciel Magalhães
    • 3
  • Rodrigo Moura-Neto
    • 4
  • Vanessa Santos Sotomaior
    • 1
  1. 1.Graduate Program in Health Sciences, School of MedicinePontifícia Universidade Católica do Paraná (PUCPR)CuritibaBrazil
  2. 2.Instituto de Criminalística do ParanáCuritibaBrazil
  3. 3.Department of GeneticsUniversidade Federal do Paraná (UFPR)CuritibaBrazil
  4. 4.Instituto de BiologiaUniversidade Federal do Rio de Janeiro (UFRJ)Rio de JaneiroBrazil

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