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Viable bacterial biomass and functional diversity in fresh and marine waters in the Canadian Arctic

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Abstract

Bacterial biomass and functional diversity in four marine and four freshwater samples, collected from Resolute Bay, Nunavut, Canada, were studied using fluorescent nucleic-acid staining and sole-carbon-source utilization. Viable microbial counts using the LIVE/DEAD BacLight Viability Kit estimated viable marine bacterial numbers from 0.7 to 1.8×106 cells/l, which were lower than viable bacterial numbers in freshwater samples (2.1–9.9×106 cells/l) (RCBD-ANOVA). Calculations of the Shannon-Wiener diversity index and average well colour development were based on substrate utilization in ECO-Biolog plates incubated at 4°C and 20°C for 38 and 24 days, respectively. The Shannon-Wiener diversity of the marine water samples was significantly greater ( x H'=2.40±0.08, P <0.005; RCBD-ANOVA) than that of freshwater samples ( x H'=1.20±0.00, P <0.005; RCBD-ANOVA). Differences in microbial diversity between fresh and marine water samples at 4°C ( x 4°C =2.01) and 20°C (x20°C =2.31) were also detected by RCBD-ANOVA analysis. Interactions between water type and incubation temperature were not significant ( F =1.926, F c=5.12). Principal component analysis revealed differences in metabolic substrate utilization patterns and, consequently, the microbial diversity between water types and samples.

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References

  • Atlas R (1984) Diversity of microbial communities. Advances in microbial ecology. Plenum, New York

  • Baross J, Morita R (1989) Life at low temperatures: ecological aspects.

    Google Scholar 

  • Boulos L, Prevost M, Barbeau B, Coallier J, Desjardins R (1999) LIVE/DEAD Baclight: application of a new rapid staining method for direct enumeration of viable and total bacteria in drinking water. J Microbiol Methods 37:77–86

    Google Scholar 

  • Bowman JP, Rea SM, McCammon SA, McMeekin TA (2000) Diversity and community structure within anoxic sediment from marine salinity meromictic lakes and a coastal meromictic marine basin, Vestfold Hills, Eastern Antarctica. Environ Microbiol 2:227–237

    Google Scholar 

  • Brock T, Madigan M, Martinko J, Parker J (1994) Biology of microorganisms. Prentice-Hall, Englewood Cliffs, NJ

  • Brown M, Bowman J (2001) A molecular phylogenetic survey of sea-ice microbial communities (SIMCO). FEMS Microbiol Ecol 35:267–275

    Google Scholar 

  • Carpenter-boggs L, Kennedy A, Reganold J (1998) Use of phospholipid fatty acids and carbon source utilization patterns to track microbial community succession in developing compost. Appl Environ Microbiol 64:4062–4064

    Google Scholar 

  • Choi K-H, Dobbs F (1999) Comparison of two kinds of Biolog microplates (GN and ECO) in their ability to distinguish among aquatic microbial communities. J Microbiol Methods 36:203–213

    Google Scholar 

  • Derry A, Staddon W, Trevors J (1998) Functional diversity and community structure of microorganisms in uncontaminated and creosote-contaminated soils as determined by sole-carbon-source-utilization. World J Microbiol 14:571–578

    Google Scholar 

  • Derry A, Staddon W, Kevan P, Trevors J (1999) Functional diversity and community structure of microorganisms in three arctic soils as determined by sole-carbon-source-utilization. Biodivers Conserv 8:205–221

    Google Scholar 

  • Fredrickson J, Balkwill D, Zachara J, Li S, Brockman F, Simmons M (1991) Physiological diversity and distributions of heterotrophic bacteria in deep Cretaceous sediments of the Atlantic coastal plain. Appl Environ Microbiol 7:402–411

    Google Scholar 

  • Garland J, Mills A (1991) Classification and characterization of heterotrophic microbial communities on the basis of patterns of community-level sole-carbon-source-utilization. Appl Environ Microbiol 57:2351–2359

    Google Scholar 

  • Garland J, Mills A (1994) A community-level physiological approach for studying microbial communities. Beyond the biomass. British Society of Soil Sciences

  • Guckert J, Carr G, Johnson T, Hamm B, Davidson D, Kumagai Y (1996) Community analysis by Biolog: curve integration for statistical analysis of activated sludge microbial habitats. J Microbiol Methods 27:183–197

    Google Scholar 

  • Guezennec J, Fiala-Medioni A (1996) Bacterial abundance and diversity in the Barbados trench determined by phospholipid analysis. FEMS Microbiol Ecol 19:83–93

    Google Scholar 

  • Heuer H, Krsek M, Baker P, Smalla K, Wellington EM (1997) Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients. Appl Environ Microbiol 63:3233–3241

    Google Scholar 

  • Hiorns W, Methe B, Nierzwicki-Bauer S, Zehr J (1997) Bacterial diversity in Adirondack Mountain lakes as revealed by 16S rRNA gene sequences. Appl Environ Microbiol 63:2957–2960

    Google Scholar 

  • Hobbie J, Dalet R, Jasper S (1977) Use of nucleoport filters for counting bacteria by fluorescence microscopy. Appl Environ Microbiol 33:1225–1228

    Google Scholar 

  • Hobbie J, Corliss T, Peterson B (1983) Seasonal patterns of bacterial abundance in an Arctic lake. Arct Alp Res 15:253–259

    Google Scholar 

  • Karl D, Bird D, Bjorkman K, Houlihan T, Shachelford R, Tupas L (1999) Microorganisms in the accreted ice of Lake Vostok, Antarctica. Science 10:2144–2147

    Google Scholar 

  • Kfir R, Reez M du P, Genthe B (1993) The use of monoclonal antibodies for detection of fecal bacteria in water. Water Sci Technol 27:257–260

    Google Scholar 

  • Konopka A, Oliver L, Turco RJ (1998) The use of carbon substrate utilization patterns in environmental and ecological microbiology. Microb Ecol 35:103–115

    Google Scholar 

  • Kottmeier S, Grossi S, Sullivan C (1987) Sea ice microbial communities. VIII. Bacterial production in annual sea ice of McMurdo Sound, Antarctica. Mar Ecol Prog Ser 35:175–186

    Google Scholar 

  • Kunc F (1994) Methods for the analysis of soil microbial communities. Beyond the biomass. Wiley-Sayce

  • Middelboe M (2000) Bacterial growth rate and marine virus-host dynamics. Microb Ecol 40:114–124

    Google Scholar 

  • Morgan KG, Kalff J (1972) Bacterial dynamics in 2 high Arctic lakes. Freshwater Biol. 2:217–228

    Google Scholar 

  • Muyzer G, Waal E de, Uitterlinden A (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695–700

    Google Scholar 

  • Pearce D, Butler H (2002) Short-term stability of the microbial community structure in a maritime Antarctic lake. Polar Biol 25:479–487

    Google Scholar 

  • Sahm K, Berninger U-G (1998) Abundance, vertical distribution, and community structure of benthic prokaryotes from permanently cold marine sediments (Svalbard, Arctic Ocean). Mar Ecol Prog Ser 165:71–80

    Google Scholar 

  • Skidmore M, Foght J, Sharp M (2000) Microbial life beneath a high Arctic Glacier. Appl Environ Microbiol 66:3214–3220

    Google Scholar 

  • Staddon WJ, Duchesne LC, Trevors JT (1997) Microbial diversity and community structure of postdisturbance forest soils as determined by sole-carbon-source utilization patterns. Microb Ecol 34:125–130

    Google Scholar 

  • Staddon WJ, Duchesne LC, Trevors JT (1998) Impact of clear-cutting and prescribed burning on microbial diverstiy and community structure in a Jack pine ( Pinus banksiana Lamb.) clear-cut using Biolog Gram-negative microplates. World J Microbiol Biotechnol 14:119–123

    Google Scholar 

  • Steward G, Smith D, Azam F (1996) Abundance and production of bacteria and viruses in the Bering and Chukchi Seas. Mar Ecol Prog Ser 131:287–300

    Google Scholar 

  • Tam L, Derry A, Kevan P, Trevors J (2001) Functional diversity and community structure of microorganisms in rhizosphere and non-rhizosphere Canadian arctic soils. Biodivers Conserv 10:1933–1947

    Google Scholar 

  • Wichels A, Biel S, Gelderblom H, Brinkhoff T, Muyzer G, Schutt C (1998) Bacteriophage diversity in the North Sea. Appl Environ Microbiol 64:4128–4133

    Google Scholar 

  • Yu F, McFetter G (1994) Rapid in situ assessment of physiological activites in bacterial biofilms using fluorescent probes. J Microbiol Methods 20:1–10

    Google Scholar 

  • Zak J, Willig M, Moorhead D, Wildman H (1994) Functional diversity of microbial communities: a quantitative approach. Soil Biol Biochem 26:1101–1108

    Google Scholar 

Download references

Acknowledgements

Sincere appreciation is expressed to Drs. B. Staddon and L. Beaudette for their contributions to this project and also to Dr. P.G. Kevan and the Arctic Ecology field crew for sample collection. Research by P.G. Kevan and J.T. Trevors is financially supported by individual Natural Science and Engineering Research Council (Canada) Discovery grants. Sincere appreciation is expressed to the Canadian Foundation for Innovation and the Ontario Innovation Trust for equipment and infrastructure support.

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Correspondence to J. T. Trevors.

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Tam, L., Kevan, P.G. & Trevors, J.T. Viable bacterial biomass and functional diversity in fresh and marine waters in the Canadian Arctic. Polar Biol 26, 287–294 (2003). https://doi.org/10.1007/s00300-002-0474-8

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