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Current Genetics

, Volume 50, Issue 2, pp 137–147 | Cite as

The complete mitochondrial DNA sequence of the green alga Oltmannsiellopsis viridis: evolutionary trends of the mitochondrial genome in the Ulvophyceae

  • Jean-François Pombert
  • Philippe Beauchamp
  • Christian Otis
  • Claude Lemieux
  • Monique Turmel
Research Article

Abstract

The mitochondrial genome displays a highly plastic architecture in the green algal division comprising the classes Prasinophyceae, Trebouxiophyceae, Ulvophyceae, and Chlorophyceae (Chlorophyta). The compact mitochondrial DNAs (mtDNAs) of Nephroselmis (Prasinophyceae) and Prototheca (Trebouxiophyceae) encode about 60 genes and have been ascribed an ‘ancestral’ pattern of evolution, whereas those of chlorophycean green algae are much more reduced in gene content and size. Although the mtDNA of the early-diverging ulvophyte Pseudendoclonium contains 57 conserved genes, it differs from ‘ancestral’ chlorophyte mtDNAs by its unusually large size (96 kb) and long intergenic spacers. To gain insights into the evolutionary trends of mtDNA in the Ulvophyceae, we have determined the complete mtDNA sequence of Oltmannsiellopsis viridis, an ulvophyte belonging to a distinct, early-diverging lineage. This 56,761 bp genome harbours 54 conserved genes, numerous repeated sequences, and only three introns. From our comparative analyses with Pseudendoclonium mtDNA, we infer that the mitochondrial genome of the last common ancestor of the two ulvophytes closely resembled that of the trebouxiophyte Prototheca in terms of gene content and gene density. Our results also provide strong evidence for the intracellular, interorganellar transfer of a group I intron and for two distinct events of intercellular, horizontal DNA transfer.

Keywords

Green algae Mitochondrial genome evolution Horizontal DNA transfers Introns Repeated sequences 

Abbreviations

DHE

Double-hairpin element

LSU

Large subunit

mtDNA

Mitochondrial DNA

ORF

Open reading frame

SDRs

Short dispersed repeats

Notes

Acknowledgements

We are grateful to Patrick Charlebois for his help with the analysis of conserved gene clusters. This work was supported by a grant from the Natural Sciences and Engineering Research Council of Canada (to M.T. and C.L.). Nucleotide sequence data reported are available in the GenBank database under the accession number DQ365900.

Supplementary material

294_2006_76_MOESM1_ESM.pdf (1.9 mb)
Supplementary material

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Copyright information

© Springer-Verlag 2006

Authors and Affiliations

  • Jean-François Pombert
    • 1
  • Philippe Beauchamp
    • 1
  • Christian Otis
    • 1
  • Claude Lemieux
    • 1
  • Monique Turmel
    • 1
  1. 1.Département de biochimie et de microbiologie, Pavillon Charles-Eugène MarchandUniversité LavalQuébecCanada

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